##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2727548.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2812037 Sequences flagged as poor quality 0 Sequence length 43 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.727554793909185 31.0 31.0 34.0 30.0 34.0 2 31.912084371578327 31.0 31.0 34.0 30.0 34.0 3 32.01008130405112 33.0 31.0 34.0 30.0 34.0 4 35.737672370598254 37.0 35.0 37.0 33.0 37.0 5 35.20911353584608 37.0 35.0 37.0 32.0 37.0 6 35.194152495148536 37.0 35.0 37.0 32.0 37.0 7 35.16701487213717 37.0 35.0 37.0 32.0 37.0 8 35.12125445006591 37.0 35.0 37.0 32.0 37.0 9 36.74266732621228 38.0 37.0 39.0 33.0 39.0 10 36.574433053334644 38.0 35.0 39.0 32.0 39.0 11 36.69751287056322 38.0 35.0 39.0 32.0 39.0 12 36.652496393184016 38.0 35.0 39.0 32.0 39.0 13 36.73275742815617 38.0 37.0 39.0 32.0 39.0 14 37.83468247395038 39.0 37.0 40.0 33.0 41.0 15 37.79852932233822 39.0 37.0 40.0 33.0 41.0 16 37.779530639177224 39.0 37.0 40.0 33.0 41.0 17 37.78061028357735 39.0 37.0 40.0 33.0 41.0 18 37.74528855772524 39.0 37.0 40.0 33.0 41.0 19 37.80016123543182 39.0 37.0 40.0 33.0 41.0 20 37.78343883810917 39.0 37.0 40.0 33.0 41.0 21 37.740935841171364 39.0 37.0 40.0 33.0 41.0 22 37.710529413375426 39.0 37.0 40.0 33.0 41.0 23 37.647412889659705 39.0 37.0 40.0 33.0 41.0 24 37.58218188452001 39.0 37.0 40.0 32.0 41.0 25 37.49417344081888 39.0 37.0 40.0 32.0 41.0 26 37.34064167718988 39.0 36.0 40.0 32.0 41.0 27 37.25466414559979 39.0 36.0 40.0 32.0 41.0 28 37.16442813519168 39.0 36.0 40.0 32.0 41.0 29 37.03705178843664 39.0 36.0 40.0 31.0 41.0 30 36.945559393421924 39.0 36.0 40.0 31.0 41.0 31 36.853292470902765 39.0 36.0 40.0 31.0 41.0 32 36.727017105393706 38.0 36.0 40.0 30.0 41.0 33 36.66132380192722 38.0 35.0 40.0 30.0 41.0 34 36.583269352430285 38.0 35.0 40.0 30.0 41.0 35 36.55690874622204 38.0 35.0 40.0 30.0 41.0 36 36.48555371070864 38.0 35.0 40.0 30.0 41.0 37 36.42913055553679 38.0 35.0 40.0 30.0 41.0 38 36.37805441393552 38.0 35.0 40.0 30.0 41.0 39 36.31446350101368 38.0 35.0 40.0 30.0 41.0 40 36.22381320018193 38.0 35.0 40.0 30.0 41.0 41 36.16977372630588 38.0 35.0 40.0 30.0 41.0 42 36.10129987621073 38.0 35.0 40.0 30.0 41.0 43 35.01185439594145 38.0 33.0 40.0 26.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 1.0 9 2.0 10 8.0 11 9.0 12 9.0 13 4.0 14 4.0 15 15.0 16 39.0 17 74.0 18 150.0 19 328.0 20 602.0 21 1218.0 22 2109.0 23 3587.0 24 5747.0 25 8994.0 26 13613.0 27 19749.0 28 27947.0 29 38784.0 30 52466.0 31 69535.0 32 92283.0 33 123366.0 34 171698.0 35 245014.0 36 366567.0 37 543002.0 38 691778.0 39 333335.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 42.7400492952262 18.459607750538133 12.627038691169426 26.17330426306624 2 18.29737659924105 20.779989736977143 35.62136629069959 25.30126737308222 3 20.2707859107117 22.8226015518288 29.353383330304688 27.55322920715481 4 15.425472708929505 15.402393353999255 33.8921216185989 35.28001231847234 5 15.727709130427517 35.69999256766536 33.51374821881789 15.058550083089234 6 35.889321513194886 34.085397880611104 14.930457885155848 15.094822721038165 7 29.78666354674565 30.088579915555876 21.14961502995871 18.975141507739764 8 27.092708950842397 35.09480849647426 19.46926729626957 18.343215256413767 9 27.46297434919953 14.675624822859728 18.73691562379869 39.124485204142054 10 16.74074701008557 26.719420832656184 33.218766324909666 23.321065832348577 11 36.39475583002642 21.445699327569304 21.07728312251937 21.082261719884908 12 21.851134960173 24.380973650062217 30.224851237732647 23.543040152032138 13 31.1520438742449 19.57801408729686 24.16771187576835 25.102230162689892 14 22.793690125698916 19.90084056504235 25.445255521175575 31.860213788083158 15 25.71193053291973 27.07208333318516 22.372891964081553 24.843094169813554 16 24.92876160591059 25.66484722640563 24.5238593944532 24.88253177323058 17 24.483781685660606 25.779532772861806 25.393229178705685 24.3434563627719 18 24.561732295841058 25.246289433602758 25.999195600911367 24.192782669644817 19 25.29227033641449 25.27104017479144 25.89183570486448 23.544853783929586 20 24.75966710253101 24.905362198292554 25.870747788880443 24.464222910295987 21 24.490004932367533 25.39749654787615 26.05364011924452 24.058858400511802 22 25.036263747596493 24.883598615523194 25.346643731928136 24.733493904952176 23 24.53104279922348 24.950134013172658 25.68067205374609 24.83815113385777 24 24.408213689933667 25.023959499821657 25.699590723735145 24.86823608650953 25 24.86674250729987 24.664931506946743 25.483839650758505 24.984486334994884 26 24.55974085689484 24.990247283375005 25.85869247097389 24.591319388756265 27 25.065601910643426 25.2886430726196 25.415206129933566 24.230548886803412 28 24.766032594876954 25.480105702734352 25.217235761833862 24.53662594055484 29 24.590430353512417 25.542764906720645 25.802647689201812 24.064157050565125 30 24.966990121395984 25.24792525845144 25.432880150581234 24.352204469571344 31 24.681752053760317 24.918377674262466 25.70787653220779 24.691993739769426 32 24.20519360164891 25.241346397646975 25.694896617647633 24.85856338305648 33 24.512017445005167 24.868449454968054 25.65325420682587 24.966278893200908 34 24.820939411536905 24.88509219473286 26.14656208293134 24.147406310798896 35 24.63001020256846 24.814502796371457 25.956486347796986 24.599000653263097 36 24.404621987548527 24.672968385551115 26.18916465181646 24.7332449750839 37 23.929094816319985 24.28655810716573 26.625467588086497 25.158879488427782 38 24.23453176469584 24.10092754825061 26.64474187217309 25.019798814880456 39 23.673621648648293 24.159354944476195 27.243987187935293 24.92303621894022 40 24.19381395052768 23.89591602101964 27.447611820185863 24.46265820826682 41 23.658685856551674 23.949080328601653 27.45227036486362 24.939963449983054 42 23.229317395183635 24.25899801460649 27.648498223885387 24.863186366324484 43 23.12956764082407 23.889443844444436 27.494872933748738 25.486115580982755 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 768.0 1 821.0 2 874.0 3 1609.5 4 2345.0 5 2345.0 6 2830.5 7 3316.0 8 2993.5 9 2671.0 10 3627.5 11 4584.0 12 4584.0 13 7224.5 14 9865.0 15 12608.0 16 15351.0 17 14347.0 18 13343.0 19 13343.0 20 15305.0 21 17267.0 22 16807.0 23 16347.0 24 19406.0 25 22465.0 26 22465.0 27 27182.5 28 31900.0 29 37126.0 30 42352.0 31 49985.5 32 57619.0 33 57619.0 34 67013.0 35 76407.0 36 87027.5 37 97648.0 38 110936.0 39 124224.0 40 124224.0 41 138113.5 42 152003.0 43 166959.5 44 181916.0 45 198201.5 46 214487.0 47 214487.0 48 230490.5 49 246494.0 50 255189.5 51 263885.0 52 264311.5 53 264738.0 54 264738.0 55 250253.0 56 235768.0 57 215510.5 58 195253.0 59 180169.5 60 165086.0 61 165086.0 62 144100.0 63 123114.0 64 103504.5 65 83895.0 66 69887.0 67 55879.0 68 55879.0 69 45673.5 70 35468.0 71 29018.5 72 22569.0 73 18162.0 74 13755.0 75 13755.0 76 11096.5 77 8438.0 78 6673.0 79 4908.0 80 3853.0 81 2798.0 82 2798.0 83 2028.0 84 1258.0 85 952.5 86 647.0 87 431.0 88 215.0 89 215.0 90 148.5 91 82.0 92 53.0 93 24.0 94 16.5 95 9.0 96 9.0 97 5.0 98 1.0 99 1.0 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 2812037.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 64.17769643091025 #Duplication Level Percentage of deduplicated Percentage of total 1 83.13676782941862 53.35526248003494 2 9.075040659418592 11.648304090766679 3 3.0216616147433655 5.817698454838013 4 1.376160964930919 3.532753625896201 5 0.8285614529776343 2.6587582701776262 6 0.5370035663811809 2.0678191119316547 7 0.38565763749169124 1.7325433149642653 8 0.27677684763383453 1.4210320405238825 9 0.2120033700597796 1.2245299133423815 >10 1.0983425493197587 12.119318926385944 >50 0.038492268428032855 1.6507037766037378 >100 0.012146055385081662 1.3481271945710946 >500 7.202955821598718E-4 0.3154808894136585 >1k 5.540735245264433E-4 0.6759796783163637 >5k 1.1081470490528868E-4 0.43168823223359576 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 6490 0.23079354930251628 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 5650 0.20092196510927843 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 4615 0.16411590601403894 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3205 0.11397431826110398 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 7.112281950770919E-5 0.0 3 0.0 0.0 0.0 7.112281950770919E-5 0.0 4 0.0 0.0 0.0 7.112281950770919E-5 0.0 5 0.0 0.0 0.0 7.112281950770919E-5 0.0 6 0.0 0.0 0.0 7.112281950770919E-5 0.0 7 0.0 0.0 0.0 7.112281950770919E-5 0.0 8 0.0 0.0 0.0 7.112281950770919E-5 0.0 9 0.0 0.0 0.0 7.112281950770919E-5 7.112281950770919E-5 10 3.556140975385459E-5 0.0 0.0 2.8449127803083674E-4 7.112281950770919E-5 11 7.112281950770919E-5 0.0 0.0 2.8449127803083674E-4 7.112281950770919E-5 12 7.112281950770919E-5 0.0 0.0 3.556140975385459E-4 7.112281950770919E-5 13 7.112281950770919E-5 0.0 0.0 3.556140975385459E-4 7.112281950770919E-5 14 7.112281950770919E-5 0.0 0.0 3.556140975385459E-4 1.4224563901541837E-4 15 7.112281950770919E-5 3.556140975385459E-5 0.0 3.556140975385459E-4 2.1336845852312753E-4 16 7.112281950770919E-5 3.556140975385459E-5 0.0 4.622983268001097E-4 2.1336845852312753E-4 17 7.112281950770919E-5 3.556140975385459E-5 0.0 5.689825560616735E-4 2.1336845852312753E-4 18 7.112281950770919E-5 3.556140975385459E-5 0.0 8.534738340925101E-4 2.1336845852312753E-4 19 7.112281950770919E-5 3.556140975385459E-5 0.0 0.0011735265218772014 2.1336845852312753E-4 20 7.112281950770919E-5 3.556140975385459E-5 0.0 0.0014224563901541836 2.489298682769821E-4 21 7.112281950770919E-5 3.556140975385459E-5 0.0 0.001991438946215857 2.489298682769821E-4 22 7.112281950770919E-5 3.556140975385459E-5 0.0 0.003307211107108477 2.489298682769821E-4 23 7.112281950770919E-5 3.556140975385459E-5 0.0 0.00433849198997026 3.911755072924005E-4 24 7.112281950770919E-5 3.556140975385459E-5 0.0 0.006401053755693826 3.911755072924005E-4 25 7.112281950770919E-5 3.556140975385459E-5 0.0 0.008463615521417393 3.911755072924005E-4 26 7.112281950770919E-5 3.556140975385459E-5 0.0 0.012375370594341397 4.2673691704625506E-4 27 7.112281950770919E-5 3.556140975385459E-5 0.0 0.02720447846169876 4.2673691704625506E-4 28 7.112281950770919E-5 3.556140975385459E-5 0.0 0.07076720541017063 4.2673691704625506E-4 29 7.112281950770919E-5 3.556140975385459E-5 0.0 0.13246625133310835 4.2673691704625506E-4 30 7.112281950770919E-5 3.556140975385459E-5 0.0 0.2203740562446369 4.2673691704625506E-4 31 7.112281950770919E-5 3.556140975385459E-5 0.0 0.5597010281159174 4.2673691704625506E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CTTATAC 2145 0.0 18.543125 37 ACGCGCA 85 2.7253855E-5 17.411764 19 TCTTATA 3275 0.0 13.387786 37 ATACCGT 160 2.6987436E-6 12.71875 6 TCGTTAC 445 0.0 12.4719095 23 TTAGAGT 335 0.0 12.149254 4 CGCGCAA 140 1.3996854E-4 11.892857 20 GTGTACG 250 2.1500455E-9 11.84 1 CGTTACG 425 0.0 11.752941 24 GTATTAC 205 2.8150134E-7 11.731708 1 TTATACT 410 0.0 11.731708 4 TACGGAT 775 0.0 11.696774 27 CTCTTAT 4765 0.0 11.453306 37 CTACACT 635 0.0 11.362205 4 ACCGTGC 310 4.1836756E-11 11.33871 8 CCTACAC 540 0.0 11.305556 3 TTATACC 265 5.3641998E-9 11.169811 4 TATACTC 250 2.717934E-8 11.099999 5 ACGGATG 860 0.0 10.97093 28 CCGATAG 135 0.0013760454 10.962963 3 >>END_MODULE