##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2727546.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2761325 Sequences flagged as poor quality 0 Sequence length 43 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.67950929354567 34.0 31.0 34.0 31.0 34.0 2 32.83788398685414 34.0 31.0 34.0 31.0 34.0 3 32.930131368093214 34.0 31.0 34.0 31.0 34.0 4 36.357794537042906 37.0 37.0 37.0 35.0 37.0 5 36.23125347432845 37.0 35.0 37.0 35.0 37.0 6 36.25887028872009 37.0 37.0 37.0 35.0 37.0 7 36.232516636035236 37.0 36.0 37.0 35.0 37.0 8 36.22879088843219 37.0 36.0 37.0 35.0 37.0 9 37.948795596316984 39.0 38.0 39.0 35.0 39.0 10 37.93786280137253 39.0 38.0 39.0 35.0 39.0 11 38.009969489285034 39.0 38.0 39.0 35.0 39.0 12 37.99089639937349 39.0 38.0 39.0 35.0 39.0 13 38.017264537857734 39.0 38.0 39.0 35.0 39.0 14 39.39380587218093 40.0 39.0 41.0 37.0 41.0 15 39.41595900518773 40.0 39.0 41.0 37.0 41.0 16 39.39698695372692 40.0 39.0 41.0 37.0 41.0 17 39.41067929345513 40.0 39.0 41.0 37.0 41.0 18 39.390989470634565 40.0 39.0 41.0 37.0 41.0 19 39.42995482241315 40.0 39.0 41.0 37.0 41.0 20 39.40562918164287 40.0 39.0 41.0 37.0 41.0 21 39.389016866902665 40.0 39.0 41.0 37.0 41.0 22 39.35289326681937 40.0 39.0 41.0 36.0 41.0 23 39.31433170669877 40.0 39.0 41.0 36.0 41.0 24 39.28111939014784 40.0 39.0 41.0 36.0 41.0 25 39.22251817515142 40.0 39.0 41.0 36.0 41.0 26 39.1298018161571 40.0 39.0 41.0 36.0 41.0 27 39.084244701366195 40.0 39.0 41.0 36.0 41.0 28 39.01476066743321 40.0 39.0 41.0 35.0 41.0 29 38.93506921496021 40.0 38.0 41.0 35.0 41.0 30 38.87367405140648 40.0 38.0 41.0 35.0 41.0 31 38.803754719201834 40.0 38.0 41.0 35.0 41.0 32 38.713686726480944 40.0 38.0 41.0 35.0 41.0 33 38.664945632984164 40.0 38.0 41.0 35.0 41.0 34 38.61221225317556 40.0 38.0 41.0 35.0 41.0 35 38.588564547816716 40.0 38.0 41.0 35.0 41.0 36 38.52385213620273 40.0 38.0 41.0 35.0 41.0 37 38.498517197359966 40.0 38.0 41.0 35.0 41.0 38 38.45405883045277 40.0 38.0 41.0 35.0 41.0 39 38.40210623523127 40.0 38.0 41.0 34.0 41.0 40 38.32956533548206 40.0 38.0 41.0 34.0 41.0 41 38.27307180429685 40.0 38.0 41.0 34.0 41.0 42 38.215249563162615 40.0 38.0 41.0 34.0 41.0 43 37.16951970521398 39.0 36.0 41.0 31.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 1.0 11 3.0 12 2.0 13 0.0 14 1.0 15 1.0 16 9.0 17 16.0 18 20.0 19 73.0 20 100.0 21 262.0 22 480.0 23 859.0 24 1661.0 25 2668.0 26 4176.0 27 6450.0 28 9568.0 29 13652.0 30 19296.0 31 26393.0 32 35863.0 33 49894.0 34 72112.0 35 105089.0 36 161995.0 37 285161.0 38 675736.0 39 1289784.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.81378504884431 17.247661901442243 12.13051705250197 26.808035997211483 2 18.22248377137787 20.251871836889897 35.53797542846279 25.987668963269446 3 20.336432690827774 22.017509710012405 29.46820819715173 28.177849402008093 4 15.289652612423385 14.721917919839209 33.55896173032873 36.42946773740867 5 16.15130417462631 35.27219722415869 33.15277991543915 15.42371868577585 6 36.503816102776746 32.98988710130101 14.889192688292757 15.61710410762949 7 29.962029098349525 29.941423048717553 20.859370048799036 19.237177804133886 8 27.40800159343793 34.361004228042695 19.631662336016223 18.599331842503148 9 28.10455125709578 14.393886992657508 18.425719536816565 39.07584221343014 10 17.01871384208668 26.35698441871203 33.014875105248386 23.609426633952904 11 36.636976813667346 21.108489583804875 20.684309163173474 21.570224439354295 12 22.056114365386183 23.866296071632277 29.75470109458322 24.322888468398325 13 31.577485446298425 19.213058948149893 23.731759209799645 25.47769639575204 14 23.07682000488896 19.850760051786732 24.969208622672088 32.10321132065223 15 26.52936543145048 26.581297022262863 21.98973318968249 24.899604356604165 16 25.151403764497115 25.27829936715164 24.485600210044094 25.084696658307156 17 24.82572677971626 25.21220790743574 24.99097353625524 24.971091776592758 18 24.667759137370645 25.07412202475261 25.819814762840306 24.43830407503644 19 25.78830814916752 25.082197857912412 25.392737182330947 23.736756810589117 20 24.884973699220485 24.430807673852225 25.471467502014434 25.212751124912856 21 24.524458366907194 25.349497071152438 25.924112518446762 24.201932043493613 22 25.392556109838576 24.494617620164234 24.655880781871023 25.45694548812617 23 24.73015671824215 24.62024571537215 25.33428698179316 25.31531058459254 24 24.42200755072293 24.593591844494945 25.423157361049498 25.56124324373263 25 25.127212479516174 24.13547843879297 25.019727848043967 25.71758123364689 26 24.645451006310378 24.532860130553267 25.630702651806654 25.190986211329708 27 25.446443283568577 25.011941730871957 25.023928729867002 24.517686255692468 28 24.88544448770065 25.42659773840457 24.510153640009776 25.177804133885 29 24.72968592976198 25.313391216173397 25.569572578381756 24.38735027568287 30 25.52999013154917 24.73196744316587 24.974459724950883 24.763582700334076 31 24.961422505500078 24.508451558581477 25.45788706508651 25.072238870831935 32 24.41193992014703 24.829348229563706 25.372782993671517 25.385928856617745 33 24.698251745086143 24.329081147637456 25.366517885435435 25.606149221840962 34 25.077091613627516 24.551184666781346 25.95677799607073 24.41494572352041 35 24.872153766760523 24.426643006527662 25.59865282065675 25.102550406055062 36 24.471874915122267 24.252016694883796 26.040976705023855 25.23513168497008 37 23.86803436755905 23.93285831982834 26.607842249644648 25.59126506296796 38 24.55574769358913 23.467248512942156 26.48319194589554 25.493811847573177 39 23.5590884810734 23.75207554344382 27.390365132680866 25.29847084280192 40 24.564439173223 23.1417163861552 27.501905787982217 24.791938652639583 41 23.783183797633384 23.450119055163736 27.44722189528578 25.319475251917105 42 23.209763428788715 23.79680044905978 27.821100377536144 25.17233574461536 43 22.992367794446505 23.30989651707061 27.435886757263273 26.26184893121961 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 489.0 1 560.5 2 632.0 3 1283.0 4 1934.0 5 1934.0 6 2333.0 7 2732.0 8 2482.5 9 2233.0 10 2973.5 11 3714.0 12 3714.0 13 5991.0 14 8268.0 15 10221.5 16 12175.0 17 11538.5 18 10902.0 19 10902.0 20 12669.0 21 14436.0 22 13978.0 23 13520.0 24 16387.0 25 19254.0 26 19254.0 27 23234.0 28 27214.0 29 31775.0 30 36336.0 31 43187.0 32 50038.0 33 50038.0 34 58862.0 35 67686.0 36 77884.5 37 88083.0 38 100073.5 39 112064.0 40 112064.0 41 125412.5 42 138761.0 43 153478.0 44 168195.0 45 186956.0 46 205717.0 47 205717.0 48 226418.0 49 247119.0 50 261077.0 51 275035.0 52 278128.5 53 281222.0 54 281222.0 55 261208.5 56 241195.0 57 219167.5 58 197140.0 59 183218.0 60 169296.0 61 169296.0 62 147810.0 63 126324.0 64 106175.5 65 86027.0 66 71944.0 67 57861.0 68 57861.0 69 47397.5 70 36934.0 71 30369.0 72 23804.0 73 19305.0 74 14806.0 75 14806.0 76 11923.0 77 9040.0 78 7208.5 79 5377.0 80 4254.5 81 3132.0 82 3132.0 83 2324.0 84 1516.0 85 1124.0 86 732.0 87 488.0 88 244.0 89 244.0 90 168.0 91 92.0 92 60.0 93 28.0 94 21.0 95 14.0 96 14.0 97 8.0 98 2.0 99 2.0 100 2.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 2761325.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 61.6962072049831 #Duplication Level Percentage of deduplicated Percentage of total 1 82.50410464559519 50.9019033547625 2 9.308324865435873 11.48576679258456 3 3.1005610242343464 5.738785662085706 4 1.4624576638177906 3.6091236422167174 5 0.8440728946793796 2.603804810312444 6 0.5805425642461062 2.149036460102399 7 0.4120048350340713 1.7793394970201863 8 0.2950796983013366 1.4564238566706533 9 0.22165565928965789 1.2307782135322682 >10 1.2033641458260458 12.819671114121364 >50 0.045052555448035596 1.8767260296244699 >100 0.0200815393834237 2.289029834649055 >500 0.0018768060582952844 0.7873843450809689 >1k 7.624524610952177E-4 1.0884430651633006 >5k 5.865018931501675E-5 0.18378332207328466 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 5079 0.18393343775180393 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 4903 0.17755968602029823 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 3761 0.13620272876246006 No Hit GTACGGAAGCAGTGGTATCAACGCAGAGTACGGAAGCAGTGGT 3484 0.12617131268503345 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 3.621449847446425E-5 0.0 5 0.0 0.0 0.0 3.621449847446425E-5 0.0 6 0.0 0.0 0.0 3.621449847446425E-5 0.0 7 0.0 0.0 0.0 7.24289969489285E-5 0.0 8 0.0 0.0 0.0 7.24289969489285E-5 0.0 9 0.0 0.0 0.0 7.24289969489285E-5 0.0 10 0.0 0.0 0.0 1.0864349542339275E-4 0.0 11 0.0 0.0 0.0 1.44857993897857E-4 3.621449847446425E-5 12 0.0 0.0 0.0 1.8107249237232125E-4 3.621449847446425E-5 13 0.0 0.0 0.0 1.8107249237232125E-4 3.621449847446425E-5 14 0.0 0.0 0.0 2.172869908467855E-4 7.24289969489285E-5 15 0.0 3.621449847446425E-5 0.0 3.621449847446425E-4 7.24289969489285E-5 16 0.0 3.621449847446425E-5 0.0 5.79431975591428E-4 1.0864349542339275E-4 17 0.0 3.621449847446425E-5 0.0 8.69147963387142E-4 1.0864349542339275E-4 18 0.0 3.621449847446425E-5 0.0 9.415769603360705E-4 1.8107249237232125E-4 19 0.0 3.621449847446425E-5 0.0 0.0013399364435551773 2.5350148932124975E-4 20 0.0 3.621449847446425E-5 0.0 0.001991797416095534 2.5350148932124975E-4 21 0.0 3.621449847446425E-5 0.0 0.003042017871854997 2.5350148932124975E-4 22 0.0 3.621449847446425E-5 0.0 0.004707884801680353 2.5350148932124975E-4 23 0.0 3.621449847446425E-5 0.0 0.006156464740658923 3.621449847446425E-4 24 0.0 3.621449847446425E-5 0.0 0.008329334649126777 3.621449847446425E-4 25 0.0 3.621449847446425E-5 0.0 0.011262709025558383 3.621449847446425E-4 26 0.0 3.621449847446425E-5 0.0 0.01575330683639195 3.621449847446425E-4 27 0.0 3.621449847446425E-5 0.0 0.034114057562945325 3.621449847446425E-4 28 0.0 3.621449847446425E-5 0.0 0.08329334649126778 3.621449847446425E-4 29 0.0 3.621449847446425E-5 0.0 0.15351325903325397 3.621449847446425E-4 30 0.0 3.621449847446425E-5 0.0 0.24473758069042942 3.621449847446425E-4 31 0.0 3.621449847446425E-5 0.0 0.6273075425746698 4.34573981693571E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CTTATAC 2030 0.0 18.591133 37 TATACCG 120 1.0427357E-7 16.958332 5 TCGTTAC 835 0.0 15.730538 23 CGTTACG 690 0.0 15.550724 24 CTCGTTA 885 0.0 15.468926 22 GTGTTAT 235 0.0 14.957447 1 TATTCCG 90 8.2791975E-4 14.388888 5 TACGGAT 1250 0.0 14.356001 27 TCTTATA 3225 0.0 14.054264 37 TTAGTAC 120 3.3036555E-5 13.874999 3 TCTCGTT 1050 0.0 13.742858 21 GTTACGG 1120 0.0 13.544642 25 ATCTCGT 1065 0.0 13.3755865 20 GTCCTAG 320 0.0 13.296875 1 GTATTAG 265 1.8189894E-12 13.264152 1 GTATAGA 420 0.0 13.214287 1 GTACTTA 1010 0.0 13.00495 30 ACGGATG 1425 0.0 12.982456 28 TTACGGA 1455 0.0 12.841924 26 TATACTG 390 0.0 12.807693 5 >>END_MODULE