##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2727545.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 3248633 Sequences flagged as poor quality 0 Sequence length 43 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.01761725624286 33.0 31.0 34.0 30.0 34.0 2 32.20795947095286 33.0 31.0 34.0 30.0 34.0 3 32.303028381476146 34.0 31.0 34.0 30.0 34.0 4 35.943493771072326 37.0 35.0 37.0 35.0 37.0 5 35.594882832255905 37.0 35.0 37.0 33.0 37.0 6 35.58620872225333 37.0 35.0 37.0 33.0 37.0 7 35.5595701330375 37.0 35.0 37.0 33.0 37.0 8 35.526105595799834 37.0 35.0 37.0 33.0 37.0 9 37.174332403814155 39.0 37.0 39.0 34.0 39.0 10 37.0627679396226 39.0 37.0 39.0 33.0 39.0 11 37.16413242123687 39.0 37.0 39.0 34.0 39.0 12 37.1251766512253 39.0 37.0 39.0 33.0 39.0 13 37.18019179143966 39.0 37.0 39.0 34.0 39.0 14 38.38107813347953 40.0 38.0 41.0 34.0 41.0 15 38.355932787729486 40.0 38.0 41.0 34.0 41.0 16 38.33918666713045 40.0 38.0 41.0 34.0 41.0 17 38.34342875911191 40.0 38.0 41.0 34.0 41.0 18 38.30766571662604 40.0 38.0 41.0 34.0 41.0 19 38.34844163683617 40.0 38.0 41.0 34.0 41.0 20 38.33245952990073 40.0 38.0 41.0 34.0 41.0 21 38.29700430919713 40.0 38.0 41.0 34.0 41.0 22 38.272712861071106 40.0 38.0 41.0 34.0 41.0 23 38.218344146599506 40.0 38.0 41.0 34.0 41.0 24 38.159540643710756 40.0 38.0 41.0 34.0 41.0 25 38.08165095903416 40.0 38.0 41.0 34.0 41.0 26 37.945415502459035 40.0 37.0 41.0 33.0 41.0 27 37.87938773016219 40.0 37.0 41.0 33.0 41.0 28 37.794906657661855 40.0 37.0 41.0 33.0 41.0 29 37.69465464396871 39.0 37.0 41.0 33.0 41.0 30 37.62152696226382 39.0 37.0 40.0 33.0 41.0 31 37.535356256000604 39.0 37.0 40.0 32.0 41.0 32 37.42419565398738 39.0 37.0 40.0 32.0 41.0 33 37.368916710505616 39.0 37.0 40.0 32.0 41.0 34 37.299547840584026 39.0 36.0 40.0 32.0 41.0 35 37.283804911173405 39.0 36.0 40.0 32.0 41.0 36 37.218944706896714 39.0 36.0 40.0 31.0 41.0 37 37.17739523054774 39.0 36.0 40.0 31.0 41.0 38 37.132361519445254 39.0 36.0 40.0 31.0 41.0 39 37.07477483606181 39.0 36.0 40.0 31.0 41.0 40 37.00079848970321 39.0 36.0 40.0 31.0 41.0 41 36.945252664736216 39.0 36.0 40.0 31.0 41.0 42 36.89008176670002 39.0 36.0 40.0 31.0 41.0 43 35.789755875779136 38.0 34.0 40.0 29.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 3.0 10 3.0 11 5.0 12 4.0 13 3.0 14 10.0 15 13.0 16 22.0 17 64.0 18 98.0 19 226.0 20 435.0 21 865.0 22 1656.0 23 2849.0 24 4686.0 25 7400.0 26 11476.0 27 16752.0 28 23885.0 29 33235.0 30 45364.0 31 60509.0 32 81269.0 33 107759.0 34 151354.0 35 215558.0 36 335469.0 37 568469.0 38 963723.0 39 615469.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.32991753762275 17.635079124050023 12.13488873627769 26.90011460204954 2 18.86802849075288 20.188922540650175 34.98637734702565 25.956671621571285 3 20.39362402585949 22.11782617488648 29.151246077965716 28.337303721288308 4 15.625957133354246 14.798778440039243 33.433324108940596 36.14194031766592 5 16.131246588949875 35.40122876299046 33.15637685143259 15.311147796627072 6 36.89444144660231 33.147788623707264 14.710402806349624 15.247367123340801 7 30.575198860566893 29.697106444464488 20.569359481357235 19.158335213611384 8 27.70907024585418 34.38347760427232 19.165846065098766 18.741606084774734 9 28.196906206395123 14.145303578459 18.04740640140022 39.610383813745656 10 16.981388787222194 26.144319780042867 32.856496871145495 24.017794561589444 11 37.282881753648375 20.786743223996062 20.693288530898997 21.237086491456562 12 22.237076333337747 23.60149638324797 29.594971177107414 24.56645610630687 13 31.67698536584465 19.05616916407609 23.55738552184873 25.709459948230535 14 23.281392511865757 19.362636530503753 24.467583749841857 32.888387207788625 15 26.356439770204883 26.602727978198832 21.54173770936883 25.499094542227454 16 25.51109959173597 25.211527433231147 23.737830650615198 25.539542324417685 17 25.208141393626182 24.98971105692764 24.41156018546878 25.390587363977403 18 25.11644128468805 24.951479591569747 25.11280898765727 24.81927013608493 19 26.249256225618588 24.560638274621972 24.93655023512967 24.25355526462977 20 25.36808559169349 24.176107304210724 24.945815670775985 25.5099914333198 21 25.103389641119815 24.726030918235455 25.488751730343196 24.681827710301533 22 25.82418512648243 24.033493472485194 24.43720173993184 25.70511966110053 23 25.15611951242261 24.32909472999874 25.030158839117867 25.48462691846078 24 24.999869175742536 24.34402408643882 24.93319497770293 25.722911760115718 25 25.659007958116536 23.969035591277933 24.60955115582462 25.762405294780912 26 25.224024997591293 24.359784561691026 24.98035327474664 25.435837165971044 27 25.800544413604122 24.735173225168865 24.398754799326365 25.06552756190065 28 25.301626868901472 24.98124595791522 24.088809046759053 25.628318126424254 29 25.227564948087394 25.044410987636955 24.902905314327594 24.825118749948054 30 26.03144153248459 24.408851353784808 24.3797314131821 25.179975700548507 31 25.59141029473012 24.305454017120432 24.865782007385874 25.23735368076357 32 24.982846631183023 24.634053769693285 24.860241215305024 25.52285838381867 33 25.105359700526343 24.13833757152624 24.914633324232067 25.841669403715343 34 25.535479076891725 24.263713383444667 25.443378799636644 24.75742874002696 35 25.500387393712987 24.231638353732173 24.92405267076952 25.343921581785324 36 25.13278662132657 24.084314848737915 25.357527304561643 25.425371225373873 37 24.724522591502335 23.83017718529609 25.821599423511366 25.62370079969021 38 25.199768641148445 23.47895253172642 25.64968095811377 25.671597869011364 39 24.382378680509618 23.778493908053015 26.377802601894395 25.46132480954297 40 25.277062690676356 23.2393132742295 26.351483839510344 25.1321401955838 41 24.361077413176556 23.52543362084914 26.523340740551486 25.590148225422816 42 24.137383324001203 23.689471848620634 26.69208864159171 25.481056185786453 43 23.821804432818357 23.359856284166295 26.451094968252804 26.36724431476255 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 293.0 1 400.5 2 508.0 3 998.5 4 1489.0 5 1489.0 6 1773.0 7 2057.0 8 1920.0 9 1783.0 10 2351.5 11 2920.0 12 2920.0 13 4718.5 14 6517.0 15 7990.0 16 9463.0 17 9051.0 18 8639.0 19 8639.0 20 10293.0 21 11947.0 22 12163.5 23 12380.0 24 15335.0 25 18290.0 26 18290.0 27 22525.5 28 26761.0 29 31844.5 30 36928.0 31 44942.0 32 52956.0 33 52956.0 34 63080.5 35 73205.0 36 85721.0 37 98237.0 38 114775.5 39 131314.0 40 131314.0 41 147192.5 42 163071.0 43 182483.0 44 201895.0 45 224664.0 46 247433.0 47 247433.0 48 269464.5 49 291496.0 50 306419.5 51 321343.0 52 320408.5 53 319474.0 54 319474.0 55 303517.0 56 287560.0 57 266553.5 58 245547.0 59 229259.5 60 212972.0 61 212972.0 62 186693.5 63 160415.0 64 134933.0 65 109451.0 66 91424.5 67 73398.0 68 73398.0 69 60136.0 70 46874.0 71 38473.5 72 30073.0 73 24131.5 74 18190.0 75 18190.0 76 14507.5 77 10825.0 78 8526.0 79 6227.0 80 4910.5 81 3594.0 82 3594.0 83 2676.5 84 1759.0 85 1334.5 86 910.0 87 600.5 88 291.0 89 291.0 90 194.0 91 97.0 92 63.5 93 30.0 94 22.0 95 14.0 96 14.0 97 10.5 98 7.0 99 3.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 3248633.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 57.007417267674555 #Duplication Level Percentage of deduplicated Percentage of total 1 80.23014237844184 45.73713204012773 2 10.036941319868747 11.443602038258435 3 3.4194987309729195 5.848103730085706 4 1.765125311261677 4.025009405953133 5 1.0378868688169633 2.958362490364441 6 0.6694725723972496 2.2898941370348074 7 0.4689282132549457 1.8712670425126834 8 0.3769296801380052 1.719023004495869 9 0.27454704465907837 1.4086096141038265 >10 1.6211192681252078 16.540326215468635 >50 0.07267813616005331 2.79129832023486 >100 0.025108977908469228 2.3944373801718006 >500 0.0011890985303790464 0.43494883976484006 >1k 4.32399464472774E-4 0.5379857414233401 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 3915 0.12051222775856799 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 3748 0.11537160399466484 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 3.0782178226965004E-5 2 0.0 0.0 0.0 0.0 3.0782178226965004E-5 3 0.0 0.0 0.0 0.0 3.0782178226965004E-5 4 0.0 0.0 0.0 3.0782178226965004E-5 3.0782178226965004E-5 5 0.0 0.0 0.0 3.0782178226965004E-5 3.0782178226965004E-5 6 0.0 0.0 0.0 3.0782178226965004E-5 6.156435645393001E-5 7 0.0 0.0 0.0 3.0782178226965004E-5 6.156435645393001E-5 8 0.0 0.0 0.0 3.0782178226965004E-5 6.156435645393001E-5 9 0.0 0.0 0.0 3.0782178226965004E-5 1.5391089113482503E-4 10 0.0 0.0 0.0 6.156435645393001E-5 1.5391089113482503E-4 11 0.0 0.0 0.0 9.2346534680895E-5 1.5391089113482503E-4 12 0.0 0.0 0.0 9.2346534680895E-5 1.5391089113482503E-4 13 0.0 0.0 0.0 9.2346534680895E-5 1.5391089113482503E-4 14 0.0 0.0 0.0 1.2312871290786001E-4 1.8469306936179E-4 15 0.0 0.0 0.0 1.8469306936179E-4 2.4625742581572003E-4 16 0.0 0.0 0.0 4.0016831695054503E-4 2.7703960404268504E-4 17 0.0 0.0 0.0 6.772079209932301E-4 2.7703960404268504E-4 18 0.0 0.0 0.0 8.619009903550201E-4 3.3860396049661506E-4 19 0.0 0.0 0.0 9.850297032628801E-4 3.3860396049661506E-4 20 0.0 0.0 0.0 0.0013544158419864602 3.3860396049661506E-4 21 0.0 0.0 0.0 0.0018161485153909353 3.6938613872358E-4 22 0.0 0.0 0.0 0.0028935247533347103 3.6938613872358E-4 23 0.0 0.0 0.0 0.0039401188130515205 4.6173267340447505E-4 24 0.0 0.0 0.0 0.005663920793761561 4.6173267340447505E-4 25 0.0 0.0 0.0 0.007633980200287321 5.540792080853701E-4 26 0.0 0.0 0.0 0.010342811884260242 5.540792080853701E-4 27 0.0 0.0 0.0 0.022286297036322664 5.540792080853701E-4 28 0.0 0.0 0.0 0.05666999011584257 5.540792080853701E-4 29 0.0 0.0 0.0 0.10579834656607871 5.540792080853701E-4 30 0.0 0.0 0.0 0.17290349510086242 5.540792080853701E-4 31 0.0 0.0 0.0 0.43430575260424925 5.540792080853701E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CTTATAC 1715 0.0 16.93586 37 TACTTAC 730 0.0 14.445206 31 TCTATAC 315 0.0 14.095239 3 TCTTATA 2730 0.0 13.553114 37 TAGTACT 240 8.185452E-11 13.104166 4 CTCGTTA 975 0.0 13.092309 22 GTCTTAG 495 0.0 13.080809 1 TTATACT 425 0.0 13.058824 4 TAATACG 100 0.0018337326 12.950001 4 GGTATCA 3390 0.0 12.933629 1 TACGGAT 1475 0.0 12.918643 27 TCGTTAC 935 0.0 12.860962 23 ACGGATG 1520 0.0 12.657895 28 GTTCTAA 325 0.0 12.523078 1 CTAATAG 195 1.4699253E-7 12.333334 3 GTCTAGA 395 0.0 12.177215 1 GTATAGG 350 0.0 12.157143 1 CTCTTAT 4085 0.0 12.046512 37 CGTTACG 805 0.0 11.950311 24 TAATACT 375 0.0 11.840001 4 >>END_MODULE