##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2727544.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 4013535 Sequences flagged as poor quality 0 Sequence length 43 %GC 51 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.68433089533292 34.0 31.0 34.0 31.0 34.0 2 32.85346907402078 34.0 31.0 34.0 31.0 34.0 3 32.944292998566105 34.0 31.0 34.0 31.0 34.0 4 36.36870215408611 37.0 37.0 37.0 35.0 37.0 5 36.241613191363726 37.0 37.0 37.0 35.0 37.0 6 36.259015556112004 37.0 37.0 37.0 35.0 37.0 7 36.237234507734456 37.0 37.0 37.0 35.0 37.0 8 36.22612858739241 37.0 36.0 37.0 35.0 37.0 9 37.94971390557202 39.0 38.0 39.0 35.0 39.0 10 37.934093261924964 39.0 38.0 39.0 35.0 39.0 11 38.00070287165803 39.0 38.0 39.0 35.0 39.0 12 37.97858795301399 39.0 38.0 39.0 35.0 39.0 13 38.00273250388996 39.0 38.0 39.0 35.0 39.0 14 39.39774463160281 40.0 39.0 41.0 37.0 41.0 15 39.41427120979386 40.0 39.0 41.0 37.0 41.0 16 39.4001173529071 40.0 39.0 41.0 37.0 41.0 17 39.41448274401494 40.0 39.0 41.0 37.0 41.0 18 39.3875257098792 40.0 39.0 41.0 37.0 41.0 19 39.42166867860876 40.0 39.0 41.0 37.0 41.0 20 39.39916258360772 40.0 39.0 41.0 37.0 41.0 21 39.3793247100125 40.0 39.0 41.0 37.0 41.0 22 39.35350657213653 40.0 39.0 41.0 36.0 41.0 23 39.31686979184185 40.0 39.0 41.0 36.0 41.0 24 39.28021681634768 40.0 39.0 41.0 36.0 41.0 25 39.22164774942787 40.0 39.0 41.0 36.0 41.0 26 39.12899899963499 40.0 39.0 41.0 36.0 41.0 27 39.08825212686572 40.0 39.0 41.0 36.0 41.0 28 39.02819933051537 40.0 39.0 41.0 36.0 41.0 29 38.95474737357467 40.0 38.0 41.0 35.0 41.0 30 38.90347411944832 40.0 38.0 41.0 35.0 41.0 31 38.83927186383076 40.0 38.0 41.0 35.0 41.0 32 38.76024103439985 40.0 38.0 41.0 35.0 41.0 33 38.71349919709184 40.0 38.0 41.0 35.0 41.0 34 38.67056622154784 40.0 38.0 41.0 35.0 41.0 35 38.657752330551496 40.0 38.0 41.0 35.0 41.0 36 38.601854474920486 40.0 38.0 41.0 35.0 41.0 37 38.581286322406555 40.0 38.0 41.0 35.0 41.0 38 38.53822229032511 40.0 38.0 41.0 35.0 41.0 39 38.486148993343775 40.0 38.0 41.0 35.0 41.0 40 38.431204162913744 40.0 38.0 41.0 34.0 41.0 41 38.38073319405462 40.0 38.0 41.0 34.0 41.0 42 38.33859453075655 40.0 38.0 41.0 34.0 41.0 43 37.279549324971626 39.0 36.0 41.0 32.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 1.0 9 1.0 10 4.0 11 2.0 12 3.0 13 2.0 14 1.0 15 3.0 16 9.0 17 12.0 18 39.0 19 70.0 20 179.0 21 317.0 22 703.0 23 1313.0 24 2286.0 25 3716.0 26 5836.0 27 8905.0 28 13150.0 29 19260.0 30 27298.0 31 37959.0 32 51899.0 33 71097.0 34 103294.0 35 152511.0 36 230929.0 37 403025.0 38 972098.0 39 1907613.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.230908662812205 16.476472735381652 11.591626832704835 27.7009917691013 2 18.832924093099972 19.4237000549391 35.00861460034608 26.73476125161485 3 20.326146402111853 21.326038018853705 29.082417370223506 29.265398208810932 4 15.502618016287387 14.104274660617136 33.04994225788489 37.34316506521059 5 16.403569421968413 35.201910535226425 32.872567449891434 15.52195259291373 6 37.59456439273608 32.30573546761147 14.683091090522446 15.416609049130006 7 31.16013688680926 29.493376786299358 20.166013252656324 19.180473074235056 8 28.212286674963593 34.078636414034015 19.0435115179013 18.665565393101094 9 28.95390223331801 13.766069063805347 17.44738740287552 39.83264130000112 10 17.12958775742581 25.745159815474388 32.5360561201036 24.589196306996204 11 37.95487020793391 20.29721928424693 20.387638328804904 21.36027217901426 12 22.635905753905224 23.04868401546268 29.14176654744508 25.173643683187013 13 32.092183075518214 18.66818154071162 23.129784591388887 26.109850792381277 14 23.727561862547606 18.892522427236838 23.783721831253494 33.59619387896206 15 26.976667700667868 26.110697925893263 21.04431629473768 25.868318078701197 16 25.951710898248052 24.76888827430183 23.294078661329724 25.98532216612039 17 25.716332360375578 24.32224958795675 23.79062347780697 26.1707945738607 18 25.522837099963002 24.65980737678879 24.45607176715788 25.36128375609033 19 26.959077222448542 24.011251926294403 24.2218144354042 24.807856415852857 20 25.860668961401856 23.553899492591942 24.319110210824125 26.26632133518208 21 25.546432259840763 24.24187156708488 25.128371871679207 25.083324301395155 22 26.369148394121396 23.34567905848585 23.774752182303132 26.510420365089626 23 25.58562464261555 23.904837007774944 24.597916799031278 25.91162155057823 24 25.303803255733413 23.711491241511535 24.50129374728263 26.483411755472417 25 26.11642853494488 23.28411238471821 24.05557694152412 26.54388213881279 26 25.645397386593118 23.779187175395254 24.510587300222873 26.06482813778876 27 26.446387037860642 24.23935508224047 23.756538811795586 25.557719068103307 28 25.73362385029656 24.725734296573968 23.134817561077703 26.405824292051772 29 25.716182866226404 24.716141755335382 24.260433757273823 25.307241621164383 30 26.944700868436428 23.73157328888374 23.570966741289162 25.75275910139067 31 26.1364358352425 23.8151405182713 24.34654238719732 25.701881259288882 32 25.598854874817338 24.12905331584252 24.184939211941593 26.087152597398557 33 25.523509823634278 23.5427870941701 24.31776476348157 26.61593831871405 34 26.112043373235817 23.826576820683012 24.916414083843794 25.144965722237377 35 26.113513399036016 23.68831964838976 24.21232155693173 25.985845395642492 36 25.58422936388994 23.545976302685787 24.823902121197396 26.045892212226878 37 25.13430180626306 23.47429385815746 25.3137446166534 26.077659718926082 38 25.838842815622638 22.890668699787096 24.87014564467483 26.400342839915435 39 24.656418842740877 23.476087787947534 25.956270469797822 25.91122289951377 40 25.97164345147108 22.526700277934538 25.802391158916016 25.69926511167836 41 24.823378891675294 23.122907860526944 25.95245836899392 26.101254878803847 42 24.649890931560332 23.283913059185977 26.19483821618598 25.871357793067705 43 24.185312947314525 22.8292266044771 25.844623256057314 27.140837192151057 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 132.0 1 185.0 2 238.0 3 586.0 4 934.0 5 934.0 6 1103.5 7 1273.0 8 1134.0 9 995.0 10 1366.5 11 1738.0 12 1738.0 13 2796.0 14 3854.0 15 4690.5 16 5527.0 17 5599.5 18 5672.0 19 5672.0 20 7229.0 21 8786.0 22 9630.0 23 10474.0 24 13643.0 25 16812.0 26 16812.0 27 21059.5 28 25307.0 29 30580.0 30 35853.0 31 44394.0 32 52935.0 33 52935.0 34 63975.5 35 75016.0 36 89611.5 37 104207.0 38 123229.0 39 142251.0 40 142251.0 41 163021.5 42 183792.0 43 208405.0 44 233018.0 45 266715.5 46 300413.0 47 300413.0 48 334361.0 49 368309.0 50 391790.0 51 415271.0 52 416448.5 53 417626.0 54 417626.0 55 396331.0 56 375036.0 57 349976.0 58 324916.0 59 303784.5 60 282653.0 61 282653.0 62 249214.5 63 215776.0 64 181607.0 65 147438.0 66 123428.0 67 99418.0 68 99418.0 69 81144.0 70 62870.0 71 51196.5 72 39523.0 73 31728.0 74 23933.0 75 23933.0 76 19204.0 77 14475.0 78 11489.0 79 8503.0 80 6612.0 81 4721.0 82 4721.0 83 3465.5 84 2210.0 85 1626.0 86 1042.0 87 725.0 88 408.0 89 408.0 90 261.0 91 114.0 92 78.0 93 42.0 94 30.0 95 18.0 96 18.0 97 10.0 98 2.0 99 3.0 100 4.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 4013535.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 51.667128397848906 #Duplication Level Percentage of deduplicated Percentage of total 1 78.6461469756736 40.63420573788225 2 10.379428680853964 10.725505486999944 3 3.7693151307330655 5.842490664946197 4 1.874303884216292 3.8735959776956026 5 1.1496765126607764 2.9700241997817742 6 0.7736069142042631 2.39820286593932 7 0.5304728557443416 1.9185606404521536 8 0.416898141207569 1.723194383247681 9 0.3234958271235515 1.5042690392544782 >10 1.9648387754921535 18.86152487822327 >50 0.12478170429694249 4.348846786090869 >100 0.044477616686460594 3.9552849549559768 >500 0.0017368173971966444 0.6012336524466797 >1k 8.201637098386452E-4 0.6430607320838895 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 2.491569152878946E-5 2 0.0 0.0 0.0 0.0 2.491569152878946E-5 3 0.0 0.0 0.0 0.0 2.491569152878946E-5 4 0.0 0.0 0.0 0.0 2.491569152878946E-5 5 0.0 0.0 0.0 0.0 2.491569152878946E-5 6 0.0 0.0 0.0 0.0 2.491569152878946E-5 7 0.0 0.0 0.0 0.0 2.491569152878946E-5 8 0.0 0.0 0.0 0.0 4.983138305757892E-5 9 0.0 0.0 0.0 0.0 7.474707458636838E-5 10 0.0 0.0 0.0 9.966276611515784E-5 7.474707458636838E-5 11 0.0 0.0 0.0 1.245784576439473E-4 7.474707458636838E-5 12 0.0 0.0 0.0 1.245784576439473E-4 7.474707458636838E-5 13 0.0 0.0 0.0 1.245784576439473E-4 7.474707458636838E-5 14 0.0 0.0 0.0 1.4949414917273676E-4 1.4949414917273676E-4 15 0.0 0.0 0.0 2.2424122375910513E-4 2.2424122375910513E-4 16 0.0 0.0 0.0 2.491569152878946E-4 3.7373537293184186E-4 17 0.0 0.0 0.0 4.733981390469997E-4 3.9865106446063136E-4 18 0.0 0.0 0.0 6.976393628061048E-4 4.235667559894208E-4 19 0.0 0.0 0.0 8.969648950364205E-4 4.235667559894208E-4 20 0.0 0.0 0.0 0.001245784576439473 4.235667559894208E-4 21 0.0 0.0 0.0 0.0019185082477167882 4.235667559894208E-4 22 0.0 0.0 0.0 0.002665978993580472 4.235667559894208E-4 23 0.0 0.0 0.0 0.0035629438886168926 4.983138305757891E-4 24 0.0 0.0 0.0 0.0051824638379882075 5.232295221045786E-4 25 0.0 0.0 0.0 0.00645316410595647 5.232295221045786E-4 26 0.0 0.0 0.0 0.008521166502845994 5.48145213633368E-4 27 0.0 0.0 0.0 0.017715056676969303 5.730609051621576E-4 28 0.0 0.0 0.0 0.046243523477433233 5.730609051621576E-4 29 0.0 0.0 0.0 0.08969648950364205 5.730609051621576E-4 30 0.0 0.0 0.0 0.14545780714507286 5.730609051621576E-4 31 0.0 0.0 0.0 0.3961345796162236 5.730609051621576E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CTTATAC 1980 0.0 19.34091 37 TACTTAC 1125 0.0 14.8 31 TCTTATA 3300 0.0 14.183333 37 GTACTTA 1245 0.0 13.967871 30 TTACATA 690 0.0 13.673912 34 ACTTACA 1050 0.0 13.390475 32 TCGTTAC 1320 0.0 13.314394 23 TACGGAT 2490 0.0 13.299196 27 CGTTACG 1115 0.0 13.273542 24 GTATAGG 420 0.0 13.214285 1 ACGGATG 2615 0.0 13.017209 28 CGTATAC 160 2.6995604E-6 12.71875 3 GTACCGT 365 0.0 12.671233 6 GTCTTAG 595 0.0 12.436975 1 CTCGTTA 1535 0.0 12.41368 22 GTTACGG 1925 0.0 12.397403 25 GGTATCA 2920 0.0 12.354452 1 AGTGTAC 1455 0.0 12.333333 27 TACATAT 695 0.0 12.244604 35 TACCGTC 320 0.0 12.140625 7 >>END_MODULE