##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2727543.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1034448 Sequences flagged as poor quality 0 Sequence length 43 %GC 52 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.31838043091581 33.0 31.0 34.0 31.0 34.0 2 32.497269074907585 34.0 31.0 34.0 31.0 34.0 3 32.589343301934946 34.0 31.0 34.0 31.0 34.0 4 36.123823527137176 37.0 35.0 37.0 35.0 37.0 5 35.93368347176465 37.0 35.0 37.0 35.0 37.0 6 35.945059587335464 37.0 35.0 37.0 35.0 37.0 7 35.9195416299321 37.0 35.0 37.0 35.0 37.0 8 35.90311934480999 37.0 35.0 37.0 35.0 37.0 9 37.592005591387874 39.0 37.0 39.0 35.0 39.0 10 37.515908001175504 39.0 37.0 39.0 35.0 39.0 11 37.613762122407316 39.0 37.0 39.0 35.0 39.0 12 37.573884815863146 39.0 37.0 39.0 35.0 39.0 13 37.61574868915596 39.0 37.0 39.0 35.0 39.0 14 38.90172246454148 40.0 38.0 41.0 36.0 41.0 15 38.903942972483875 40.0 38.0 41.0 36.0 41.0 16 38.88734281471857 40.0 38.0 41.0 36.0 41.0 17 38.90067746276275 40.0 38.0 41.0 36.0 41.0 18 38.858706285864535 40.0 38.0 41.0 36.0 41.0 19 38.90238755355513 40.0 38.0 41.0 36.0 41.0 20 38.8762509086972 40.0 38.0 41.0 35.0 41.0 21 38.8493679720972 40.0 38.0 41.0 35.0 41.0 22 38.821293095448006 40.0 38.0 41.0 35.0 41.0 23 38.777782933506565 40.0 38.0 41.0 35.0 41.0 24 38.73103432942013 40.0 38.0 41.0 35.0 41.0 25 38.66031255316845 40.0 38.0 41.0 35.0 41.0 26 38.543484061064454 40.0 38.0 41.0 34.0 41.0 27 38.49551354925526 40.0 38.0 41.0 34.0 41.0 28 38.41207967921056 40.0 38.0 41.0 34.0 41.0 29 38.32267064173356 40.0 38.0 41.0 34.0 41.0 30 38.264933568434564 40.0 38.0 41.0 34.0 41.0 31 38.18871224073129 40.0 38.0 41.0 34.0 41.0 32 38.09495499048768 40.0 38.0 41.0 34.0 41.0 33 38.0517860733454 40.0 38.0 41.0 33.0 41.0 34 38.00322877515351 40.0 38.0 41.0 33.0 41.0 35 37.993000131471085 40.0 38.0 41.0 33.0 41.0 36 37.92683634170108 40.0 37.0 41.0 33.0 41.0 37 37.909390322181494 40.0 37.0 41.0 33.0 41.0 38 37.875669922509395 40.0 37.0 41.0 33.0 41.0 39 37.81981501245109 40.0 37.0 41.0 33.0 41.0 40 37.77982363540748 40.0 37.0 41.0 33.0 41.0 41 37.7234612082966 40.0 37.0 41.0 33.0 41.0 42 37.695410499126105 40.0 37.0 41.0 33.0 41.0 43 36.559987548914975 38.0 35.0 40.0 30.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 1.0 10 0.0 11 0.0 12 0.0 13 0.0 14 1.0 15 0.0 16 1.0 17 6.0 18 14.0 19 41.0 20 79.0 21 144.0 22 320.0 23 561.0 24 977.0 25 1603.0 26 2443.0 27 3715.0 28 5317.0 29 7454.0 30 10402.0 31 14202.0 32 19434.0 33 26084.0 34 36968.0 35 52409.0 36 80456.0 37 137452.0 38 306877.0 39 327487.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.60431843843286 16.496914296320355 11.707790048412294 28.190977216834483 2 19.091534808902914 19.462940621471546 34.240580483504246 27.20494408612129 3 20.525729664516728 21.159304285957344 28.88787063245325 29.427095417072678 4 16.005057769941068 14.271282848437043 32.332219695915114 37.39143968570677 5 16.741972530277017 34.76743151903237 32.71193912115447 15.77865682953614 6 38.27210260931434 31.925626034368086 14.257362380709326 15.544908975608246 7 31.35034337153728 29.307128052835907 19.755947133157008 19.5865814424698 8 28.858386308446633 33.87188142854933 18.588657912239185 18.681074350764852 9 29.298911110079967 13.310963915054213 16.736075665475695 40.654049309390125 10 17.136772462221398 25.795883408349184 32.12128594187431 24.9460581875551 11 38.96638593723416 19.987278239215502 19.52848282368954 21.517852999860796 12 23.050264488886825 22.726226934558337 28.6080112291773 25.615497347377534 13 32.89348522110343 18.158476791486862 22.430223655514826 26.517814331894883 14 23.947361298006278 18.38951788780103 23.365408411055945 34.29771240313674 15 27.763696193525433 25.46459561041251 20.54081017122175 26.2308980248403 16 26.39929701637975 24.339744482081265 22.847160997942865 26.413797503596122 17 26.26434581535273 23.685289159049077 23.22204692744343 26.828318098154764 18 26.076902850602444 24.473535644130976 23.689059285725335 25.76050221954124 19 27.759732727019625 23.74599786552828 23.43646079841616 25.05780860903593 20 26.548555364793593 23.078588773916138 23.448544537763137 26.92431132352714 21 26.155688831144726 23.972398805933214 24.355791687934047 25.516120674988013 22 27.074053021514853 22.865818291494595 22.83440056919246 27.22572811779809 23 26.210984022396488 23.53728751952732 23.804869843626747 26.446858614449447 24 25.78515304780907 23.073368598518243 23.86026170479328 27.281216648879404 25 26.785686665738634 22.702252795693937 23.220790218551343 27.291270320016086 26 26.144958470604614 23.217310101619415 23.904439855845823 26.733291571930152 27 27.24786552828175 23.59857624549518 23.111649884769463 26.041908341453606 28 26.286289886006838 24.467445439500104 22.338387236477814 26.907877438015248 29 26.42017771797132 24.232440876680123 23.48846921256554 25.858912192783013 30 27.677853309204526 23.150317850679784 22.73212379935966 26.439705040756035 31 26.57987641718095 23.431047283188715 23.743484447744112 26.245591851886225 32 26.1374182172521 23.48479575580406 23.521143643759764 26.856642383184077 33 26.095173464495076 23.01817007718126 23.56387174609067 27.322784712233002 34 26.692110188235656 23.405236415943577 24.36130187307627 25.5413515227445 35 26.574559571868285 23.026097010192874 23.705106491578118 26.694236926360727 36 26.075936151454687 22.96500162405457 24.337037724467542 26.6220245000232 37 25.488473079362134 22.760351414474194 25.033641130341977 26.717534375821693 38 26.29325011987069 22.064811377662288 24.413600296969978 27.22833820549704 39 24.79496311076052 22.77398187245758 25.900673595966158 26.53038142081574 40 26.457395635160008 21.538347021793268 25.70926716471007 26.294990178336658 41 25.10914033378188 22.155004408148113 25.987096499775724 26.74875875829428 42 24.626467449306297 22.093619012265478 26.528061342861122 26.751852195567103 43 24.12929407761434 21.64391056872844 26.149695296428625 28.077100057228588 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 4.0 1 9.0 2 14.0 3 25.0 4 36.0 5 36.0 6 49.5 7 63.0 8 63.0 9 63.0 10 94.5 11 126.0 12 126.0 13 185.5 14 245.0 15 361.5 16 478.0 17 482.0 18 486.0 19 486.0 20 674.5 21 863.0 22 1110.0 23 1357.0 24 1819.0 25 2281.0 26 2281.0 27 3106.5 28 3932.0 29 5037.0 30 6142.0 31 8057.0 32 9972.0 33 9972.0 34 12614.5 35 15257.0 36 18938.5 37 22620.0 38 27168.5 39 31717.0 40 31717.0 41 37305.5 42 42894.0 43 49548.5 44 56203.0 45 65535.0 46 74867.0 47 74867.0 48 84842.0 49 94817.0 50 103949.0 51 113081.0 52 114142.0 53 115203.0 54 115203.0 55 109113.5 56 103024.0 57 96285.0 58 89546.0 59 84134.0 60 78722.0 61 78722.0 62 69312.0 63 59902.0 64 50405.0 65 40908.0 66 33931.5 67 26955.0 68 26955.0 69 22144.5 70 17334.0 71 13942.0 72 10550.0 73 8450.5 74 6351.0 75 6351.0 76 5151.0 77 3951.0 78 3152.5 79 2354.0 80 1815.5 81 1277.0 82 1277.0 83 890.5 84 504.0 85 361.0 86 218.0 87 154.5 88 91.0 89 91.0 90 58.0 91 25.0 92 17.0 93 9.0 94 6.5 95 4.0 96 4.0 97 3.0 98 2.0 99 1.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 1034448.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 69.54841852138672 #Duplication Level Percentage of deduplicated Percentage of total 1 84.98641966757766 59.10671083674903 2 8.311019223252906 11.560364865561668 3 2.711840309649018 5.658126144559106 4 1.2561440946979465 3.494513408848849 5 0.7426359138849019 2.5824576673939834 6 0.46118126156085065 1.9244656435953098 7 0.3291812894009285 1.602582665926585 8 0.23289070764835682 1.2957744324215874 9 0.17303434325918113 1.0830838431206538 >10 0.7531883674135673 8.44370607549601 >50 0.02827130853006972 1.3532039203099062 >100 0.01391520929053237 1.7636828075177735 >500 2.7830383403186477E-4 0.1313276884995315 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 9.666991477580313E-5 2 0.0 0.0 0.0 0.0 9.666991477580313E-5 3 0.0 0.0 0.0 0.0 9.666991477580313E-5 4 0.0 9.666991477580313E-5 0.0 0.0 9.666991477580313E-5 5 0.0 9.666991477580313E-5 0.0 0.0 9.666991477580313E-5 6 0.0 9.666991477580313E-5 0.0 0.0 1.9333982955160625E-4 7 0.0 9.666991477580313E-5 0.0 0.0 1.9333982955160625E-4 8 0.0 9.666991477580313E-5 0.0 0.0 1.9333982955160625E-4 9 0.0 9.666991477580313E-5 0.0 9.666991477580313E-5 1.9333982955160625E-4 10 0.0 9.666991477580313E-5 0.0 9.666991477580313E-5 1.9333982955160625E-4 11 0.0 9.666991477580313E-5 0.0 9.666991477580313E-5 1.9333982955160625E-4 12 0.0 9.666991477580313E-5 0.0 9.666991477580313E-5 1.9333982955160625E-4 13 0.0 1.9333982955160625E-4 0.0 1.9333982955160625E-4 1.9333982955160625E-4 14 0.0 1.9333982955160625E-4 0.0 1.9333982955160625E-4 3.866796591032125E-4 15 0.0 1.9333982955160625E-4 0.0 2.900097443274094E-4 3.866796591032125E-4 16 0.0 1.9333982955160625E-4 0.0 3.866796591032125E-4 4.8334957387901565E-4 17 0.0 1.9333982955160625E-4 0.0 5.800194886548188E-4 4.8334957387901565E-4 18 0.0 1.9333982955160625E-4 0.0 7.73359318206425E-4 4.8334957387901565E-4 19 9.666991477580313E-5 1.9333982955160625E-4 0.0 7.73359318206425E-4 4.8334957387901565E-4 20 9.666991477580313E-5 1.9333982955160625E-4 0.0 9.666991477580313E-4 4.8334957387901565E-4 21 9.666991477580313E-5 1.9333982955160625E-4 0.0 0.0011600389773096377 4.8334957387901565E-4 22 9.666991477580313E-5 1.9333982955160625E-4 0.0 0.00154671863641285 4.8334957387901565E-4 23 9.666991477580313E-5 1.9333982955160625E-4 0.0 0.002030068210291866 8.700292329822282E-4 24 9.666991477580313E-5 1.9333982955160625E-4 0.0 0.002900097443274094 8.700292329822282E-4 25 9.666991477580313E-5 1.9333982955160625E-4 0.0 0.0031901071876015035 8.700292329822282E-4 26 9.666991477580313E-5 1.9333982955160625E-4 0.0 0.005413515227444976 8.700292329822282E-4 27 9.666991477580313E-5 1.9333982955160625E-4 0.0 0.013533788068612438 8.700292329822282E-4 28 9.666991477580313E-5 1.9333982955160625E-4 0.0 0.04408148113776623 8.700292329822282E-4 29 9.666991477580313E-5 1.9333982955160625E-4 0.0 0.0927064482699952 8.700292329822282E-4 30 9.666991477580313E-5 1.9333982955160625E-4 0.0 0.15389850432307858 8.700292329822282E-4 31 9.666991477580313E-5 1.9333982955160625E-4 0.0 0.4382047236787156 8.700292329822282E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CTTATAC 710 0.0 20.845072 37 CTATAGT 65 6.9012756E-5 19.923077 4 TAGTACA 85 1.2450619E-6 19.588236 4 TACTTAC 315 0.0 18.793652 31 TATAGTG 90 2.1517917E-6 18.5 5 TATACCG 50 0.0070344186 18.5 5 ACTTACA 275 0.0 18.163637 32 GTACTTA 335 0.0 17.671642 30 CTTATTC 75 2.0670143E-4 17.266666 3 ATCTATA 80 3.3821558E-4 16.1875 2 CAATACT 80 3.3821558E-4 16.1875 4 GTACTAG 70 0.0025922582 15.857143 1 GGACCGT 70 0.0025922582 15.857143 6 CGTTACA 105 9.341213E-6 15.857142 24 TTACACT 130 2.5880217E-7 15.653846 34 ATCCTAT 85 5.3635065E-4 15.235294 1 TATTAAG 85 5.3635065E-4 15.235294 2 CATATAA 110 1.4515101E-5 15.136364 37 ATATGAC 100 1.0931958E-4 14.8 3 TACATAT 150 8.0970494E-8 14.8 35 >>END_MODULE