##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2727540.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1650716 Sequences flagged as poor quality 0 Sequence length 43 %GC 51 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.61224341437291 34.0 31.0 34.0 31.0 34.0 2 32.77785518526506 34.0 31.0 34.0 31.0 34.0 3 32.87540679317339 34.0 31.0 34.0 31.0 34.0 4 36.32333423799127 37.0 37.0 37.0 35.0 37.0 5 36.186253116829306 37.0 35.0 37.0 35.0 37.0 6 36.214672299777796 37.0 36.0 37.0 35.0 37.0 7 36.18649422432448 37.0 36.0 37.0 35.0 37.0 8 36.18133161609871 37.0 36.0 37.0 35.0 37.0 9 37.896305603144334 39.0 38.0 39.0 35.0 39.0 10 37.87478766789684 39.0 38.0 39.0 35.0 39.0 11 37.9512005699345 39.0 38.0 39.0 35.0 39.0 12 37.92756961221676 39.0 38.0 39.0 35.0 39.0 13 37.953945439433554 39.0 38.0 39.0 35.0 39.0 14 39.311036544142056 40.0 39.0 41.0 36.0 41.0 15 39.33260476060085 40.0 39.0 41.0 36.0 41.0 16 39.31046345949273 40.0 39.0 41.0 36.0 41.0 17 39.3264480383058 40.0 39.0 41.0 36.0 41.0 18 39.307376314278166 40.0 39.0 41.0 36.0 41.0 19 39.35072962278187 40.0 39.0 41.0 36.0 41.0 20 39.32826724887867 40.0 39.0 41.0 36.0 41.0 21 39.30438549090213 40.0 39.0 41.0 36.0 41.0 22 39.27357885911326 40.0 39.0 41.0 36.0 41.0 23 39.23194419875981 40.0 39.0 41.0 36.0 41.0 24 39.19392675663167 40.0 39.0 41.0 36.0 41.0 25 39.13779293349068 40.0 39.0 41.0 36.0 41.0 26 39.04363803343519 40.0 39.0 41.0 36.0 41.0 27 38.997707661402686 40.0 39.0 41.0 35.0 41.0 28 38.92582309737108 40.0 38.0 41.0 35.0 41.0 29 38.84411734059645 40.0 38.0 41.0 35.0 41.0 30 38.777313602097514 40.0 38.0 41.0 35.0 41.0 31 38.713908994642324 40.0 38.0 41.0 35.0 41.0 32 38.62628398828145 40.0 38.0 41.0 35.0 41.0 33 38.58082553267794 40.0 38.0 41.0 35.0 41.0 34 38.53416032800312 40.0 38.0 41.0 35.0 41.0 35 38.51823572316498 40.0 38.0 41.0 35.0 41.0 36 38.45734941685911 40.0 38.0 41.0 34.0 41.0 37 38.437161813419145 40.0 38.0 41.0 34.0 41.0 38 38.3920559320925 40.0 38.0 41.0 34.0 41.0 39 38.343687830008314 40.0 38.0 41.0 34.0 41.0 40 38.280797544822974 40.0 38.0 41.0 34.0 41.0 41 38.225580293642274 40.0 38.0 41.0 34.0 41.0 42 38.17292193205857 40.0 38.0 41.0 34.0 41.0 43 37.11595453124583 39.0 36.0 40.0 31.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 1.0 11 2.0 12 1.0 13 1.0 14 2.0 15 3.0 16 3.0 17 8.0 18 9.0 19 41.0 20 96.0 21 167.0 22 353.0 23 592.0 24 972.0 25 1640.0 26 2671.0 27 4104.0 28 5920.0 29 8594.0 30 12225.0 31 16709.0 32 22822.0 33 31328.0 34 45643.0 35 66168.0 36 101645.0 37 176702.0 38 417647.0 39 734647.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.99933119930988 16.585711897140392 12.002912675469311 27.412044228080422 2 17.913196455356342 19.8709529682877 35.607275873015105 26.608574703340853 3 20.169005449756348 21.675563815944113 29.48011650701877 28.67531422728077 4 15.272403005726002 14.333295370009136 33.313362201614325 37.08093942265053 5 16.28887101112487 35.22192793914883 32.994227959261316 15.494973090464986 6 37.098628716266155 32.62329801128722 14.650067001228559 15.628006271218064 7 30.496099874236393 30.043811291584987 20.294769057790678 19.165319776387943 8 28.155479198117668 34.43111958689442 19.20863431383715 18.204766901150773 9 28.599347192369855 14.236791792167763 17.54353868260803 39.62032233285435 10 17.010921321414465 26.242794036042543 32.3488716411545 24.397413001388486 11 37.35815246232544 20.809273066960035 20.114120175729806 21.71845429498472 12 22.563966181947713 23.361256569876346 29.431531529348476 24.643245718827465 13 32.263575321254535 18.703277850338885 23.22119613549514 25.811950692911438 14 23.402996033236487 18.99557525340519 24.804811972501632 32.79661674085669 15 27.185657617664095 25.885615696461418 21.43681893190591 25.49190775396858 16 25.6175502024576 24.83570765655631 23.938278904426927 25.608463236559164 17 25.364266172981907 24.738477121443058 24.48719222446502 25.410064481110016 18 25.364447912299877 24.687287213548544 25.136789126657767 24.811475747493812 19 26.596277009491637 24.628343094754037 24.698555051262602 24.076824844491725 20 25.552245207534185 23.87400376563867 24.71854637623916 25.855204650587986 21 25.067485866739037 25.136789126657767 25.103591411242153 24.692133595361042 22 25.98012014180513 24.09923936037453 23.835838508865244 26.084801988955096 23 25.25607069901788 24.10905328354484 24.589511460481393 26.045364556955892 24 24.883081038773476 24.032419871134707 24.84867172790474 26.235827362187074 25 25.647961248331026 23.537180229670035 24.183324084821376 26.631534437177564 26 25.257827512424914 24.00958129684331 25.052340923574985 25.680250267156797 27 26.222560391975364 24.327564523515857 24.412860843415825 25.037014241092958 28 25.52807387824435 25.185979902054623 23.70450156174654 25.58144465795449 29 25.445261329023282 24.750290177111022 24.90604077261019 24.898407721255502 30 26.187908762016 24.22530586727214 24.288975208333838 25.29781016237802 31 25.435932044034224 24.23639196566823 24.845642739271927 25.482033251025616 32 24.9820078075211 24.223003835911207 24.623496712941538 26.17149164362616 33 25.190523385003843 23.979230830742537 24.541774599628283 26.28847118462534 34 25.722413788925536 24.2243971706823 25.269216509684284 24.78397253070789 35 25.487182531701396 23.937249048291772 24.873145956057858 25.702422463948977 36 25.073543844004664 23.893449872661318 25.433084794719385 25.599921488614637 37 24.19192641253856 23.595094492329387 25.921054863465308 26.29192423166674 38 25.141998987106202 23.070231342035818 25.642872547427903 26.144897123430077 39 23.98286561710191 23.42432011321148 26.648193874658027 25.944620395028583 40 25.291025227840525 22.73255968925 26.696900011873637 25.279515071035842 41 24.52990096418766 22.97003239806242 26.742880059319713 25.757186578430208 42 23.745392908289496 23.130750534919393 27.397444502870272 25.726412053920843 43 23.549175024655966 22.579474603747705 27.027241512168054 26.844108859428275 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 51.0 1 76.0 2 101.0 3 310.5 4 520.0 5 520.0 6 681.0 7 842.0 8 768.5 9 695.0 10 941.5 11 1188.0 12 1188.0 13 2055.5 14 2923.0 15 4096.5 16 5270.0 17 4854.0 18 4438.0 19 4438.0 20 5010.5 21 5583.0 22 5364.5 23 5146.0 24 6440.0 25 7734.0 26 7734.0 27 9736.5 28 11739.0 29 14147.5 30 16556.0 31 20531.5 32 24507.0 33 24507.0 34 30014.0 35 35521.0 36 41259.5 37 46998.0 38 54593.0 39 62188.0 40 62188.0 41 70305.0 42 78422.0 43 88148.0 44 97874.0 45 109996.0 46 122118.0 47 122118.0 48 136388.0 49 150658.0 50 160568.5 51 170479.0 52 174356.5 53 178234.0 54 178234.0 55 166803.5 56 155373.0 57 140206.0 58 125039.0 59 115873.5 60 106708.0 61 106708.0 62 93853.5 63 80999.0 64 68111.5 65 55224.0 66 46247.0 67 37270.0 68 37270.0 69 30434.0 70 23598.0 71 19221.5 72 14845.0 73 12044.5 74 9244.0 75 9244.0 76 7511.5 77 5779.0 78 4553.5 79 3328.0 80 2631.0 81 1934.0 82 1934.0 83 1419.0 84 904.0 85 677.0 86 450.0 87 304.0 88 158.0 89 158.0 90 102.0 91 46.0 92 35.0 93 24.0 94 15.0 95 6.0 96 6.0 97 4.0 98 2.0 99 1.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 1650716.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 65.51917075914969 #Duplication Level Percentage of deduplicated Percentage of total 1 83.92950860184132 54.98991805815563 2 8.935440922497664 11.708853592188367 3 2.7791937217634537 5.462714040869294 4 1.3199589941218794 3.4593047492378752 5 0.766271239398322 2.510272809098196 6 0.4973759099233371 1.9552594304252744 7 0.33909930467079713 1.5552253672924419 8 0.2640468722808747 1.3840105690712012 9 0.1953819601216634 1.1521137607621774 >10 0.9167875964237465 10.066830139055691 >50 0.036024557618930815 1.5977792864126297 >100 0.018689967698279367 2.4866884923775725 >500 0.0011101758199083404 0.4621880985575486 >1k 0.0011101758199083404 1.2088416064961562 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 2512 0.1521763889124477 No Hit GTACGGAAGCAGTGGTATCAACGCAGAGTACGGAAGCAGTGGT 2380 0.14417985892182544 No Hit GTACGGGAAGCAGTGGTATCAACGCAGAGTACGGGAAGCAGTG 2264 0.13715260529370285 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 1832 0.11098214350621184 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 1751 0.10607518192105728 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 6.0579772656229176E-5 2 0.0 0.0 0.0 1.2115954531245835E-4 6.0579772656229176E-5 3 0.0 0.0 0.0 1.2115954531245835E-4 6.0579772656229176E-5 4 0.0 0.0 0.0 1.8173931796868753E-4 6.0579772656229176E-5 5 0.0 0.0 0.0 1.8173931796868753E-4 6.0579772656229176E-5 6 0.0 0.0 0.0 3.0289886328114585E-4 1.2115954531245835E-4 7 0.0 0.0 0.0 3.0289886328114585E-4 1.2115954531245835E-4 8 0.0 0.0 0.0 3.0289886328114585E-4 1.2115954531245835E-4 9 0.0 0.0 0.0 4.240584085936042E-4 1.2115954531245835E-4 10 0.0 0.0 0.0 4.846381812498334E-4 1.2115954531245835E-4 11 0.0 0.0 0.0 4.846381812498334E-4 1.2115954531245835E-4 12 0.0 0.0 0.0 4.846381812498334E-4 1.2115954531245835E-4 13 0.0 0.0 0.0 4.846381812498334E-4 1.2115954531245835E-4 14 0.0 0.0 0.0 4.846381812498334E-4 2.423190906249167E-4 15 0.0 0.0 0.0 5.452179539060626E-4 3.6347863593737506E-4 16 0.0 0.0 0.0 5.452179539060626E-4 3.6347863593737506E-4 17 0.0 0.0 0.0 7.269572718747501E-4 3.6347863593737506E-4 18 6.0579772656229176E-5 0.0 0.0 9.086965898434376E-4 3.6347863593737506E-4 19 6.0579772656229176E-5 0.0 0.0 0.0012721752257808126 3.6347863593737506E-4 20 6.0579772656229176E-5 0.0 0.0 0.0015750740890619586 3.6347863593737506E-4 21 6.0579772656229176E-5 0.0 0.0 0.0021808718156242505 3.6347863593737506E-4 22 6.0579772656229176E-5 0.0 0.0 0.003513626814061292 3.6347863593737506E-4 23 6.0579772656229176E-5 0.0 0.0 0.0046646424945296465 6.057977265622917E-4 24 6.0579772656229176E-5 0.0 0.0 0.006906094082810126 6.057977265622917E-4 25 6.0579772656229176E-5 0.0 0.0 0.009329284989059293 6.663774992185209E-4 26 6.0579772656229176E-5 0.0 0.0 0.013812188165620251 7.269572718747501E-4 27 6.0579772656229176E-5 0.0 0.0 0.02641278087811592 7.269572718747501E-4 28 6.0579772656229176E-5 0.0 0.0 0.06500209606013391 7.269572718747501E-4 29 6.0579772656229176E-5 0.0 0.0 0.12509723053511324 7.269572718747501E-4 30 6.0579772656229176E-5 0.0 0.0 0.20354803612493003 7.269572718747501E-4 31 6.0579772656229176E-5 0.0 0.0 0.5627255082037128 7.269572718747501E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CTTATAC 1050 0.0 19.38095 37 CGACTTA 180 1.0913936E-11 16.444445 19 TTAACCT 145 5.349466E-8 15.310345 4 ATAACAC 75 0.0041054147 14.8 3 TATAACA 150 8.107054E-8 14.8 4 TCTTATA 1705 0.0 14.53959 37 GTATATA 90 8.27671E-4 14.388888 1 TACTGTG 350 0.0 14.271429 7 CTTGTTA 715 0.0 14.230769 22 TACCTAT 80 0.0063001565 13.875 6 TAAGTCG 275 0.0 13.454546 20 GTATTAT 110 2.4573784E-4 13.454545 1 GTGTAAG 250 1.0913936E-11 13.32 1 GGGCGTC 390 0.0 13.282052 11 GTATAGA 195 1.0264557E-8 13.282052 1 CTCTTAT 2765 0.0 13.24774 37 TGTACTA 155 1.8887367E-6 13.129032 5 TGTACCG 155 1.8887367E-6 13.129032 5 TATAGTG 200 1.463377E-8 12.949999 5 GTCTATA 115 3.5786387E-4 12.869565 1 >>END_MODULE