##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2727539.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1651363 Sequences flagged as poor quality 0 Sequence length 43 %GC 52 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.66198104232685 34.0 31.0 34.0 31.0 34.0 2 32.824196739299595 34.0 31.0 34.0 31.0 34.0 3 32.91910561154634 34.0 31.0 34.0 31.0 34.0 4 36.35397910695589 37.0 37.0 37.0 35.0 37.0 5 36.22165932021003 37.0 35.0 37.0 35.0 37.0 6 36.24721396809787 37.0 36.0 37.0 35.0 37.0 7 36.217590560040406 37.0 36.0 37.0 35.0 37.0 8 36.21325716998625 37.0 36.0 37.0 35.0 37.0 9 37.93735054012958 39.0 38.0 39.0 35.0 39.0 10 37.91651017977271 39.0 38.0 39.0 35.0 39.0 11 37.9967469296575 39.0 38.0 39.0 35.0 39.0 12 37.972324074113324 39.0 38.0 39.0 35.0 39.0 13 38.00347409987992 39.0 38.0 39.0 35.0 39.0 14 39.36685937616381 40.0 39.0 41.0 37.0 41.0 15 39.389932437628794 40.0 39.0 41.0 37.0 41.0 16 39.36608304776115 40.0 39.0 41.0 36.0 41.0 17 39.382488283920615 40.0 39.0 41.0 37.0 41.0 18 39.360685082565126 40.0 39.0 41.0 36.0 41.0 19 39.3997352490034 40.0 39.0 41.0 37.0 41.0 20 39.37751784435039 40.0 39.0 41.0 37.0 41.0 21 39.35344439714345 40.0 39.0 41.0 36.0 41.0 22 39.32593136699805 40.0 39.0 41.0 36.0 41.0 23 39.28958139427854 40.0 39.0 41.0 36.0 41.0 24 39.259071445829896 40.0 39.0 41.0 36.0 41.0 25 39.201465092774875 40.0 39.0 41.0 36.0 41.0 26 39.11216007625216 40.0 39.0 41.0 36.0 41.0 27 39.074259868968845 40.0 39.0 41.0 36.0 41.0 28 38.99242625637125 40.0 39.0 41.0 35.0 41.0 29 38.915902197154715 40.0 38.0 41.0 35.0 41.0 30 38.857617616478024 40.0 38.0 41.0 35.0 41.0 31 38.803746965385564 40.0 38.0 41.0 35.0 41.0 32 38.720674376257676 40.0 38.0 41.0 35.0 41.0 33 38.675123519177795 40.0 38.0 41.0 35.0 41.0 34 38.62964472378272 40.0 38.0 41.0 35.0 41.0 35 38.61746993241341 40.0 38.0 41.0 35.0 41.0 36 38.54911548823608 40.0 38.0 41.0 35.0 41.0 37 38.541309209422764 40.0 38.0 41.0 35.0 41.0 38 38.504779990831814 40.0 38.0 41.0 35.0 41.0 39 38.45554490442138 40.0 38.0 41.0 34.0 41.0 40 38.401864399287135 40.0 38.0 41.0 34.0 41.0 41 38.35135763608607 40.0 38.0 41.0 34.0 41.0 42 38.31083535237256 40.0 38.0 41.0 34.0 41.0 43 37.2147111204502 39.0 36.0 41.0 32.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 1.0 10 3.0 11 1.0 12 0.0 13 2.0 14 0.0 15 3.0 16 1.0 17 8.0 18 16.0 19 28.0 20 71.0 21 164.0 22 257.0 23 519.0 24 917.0 25 1404.0 26 2320.0 27 3543.0 28 5368.0 29 7716.0 30 10854.0 31 15284.0 32 21170.0 33 29341.0 34 43379.0 35 64625.0 36 99227.0 37 174338.0 38 416599.0 39 754204.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.98306126514885 16.40220835758098 11.859899973537011 27.75483040373316 2 18.29391841769496 19.55972127266991 35.278736413496006 26.867623896139133 3 20.39866461825777 21.38094410496057 29.111588427256756 29.108802849524906 4 15.576587340275882 14.109556772193638 32.67609847138394 37.63775741614654 5 16.616455618782787 34.836798450734335 32.73290003469861 15.81384589578427 6 37.75977783200907 32.01743044987686 14.3922323559387 15.830559362175368 7 30.95667033838108 29.6320070148114 20.020007714839196 19.39131493196832 8 28.398904420166854 34.27635232229377 18.97511328520743 18.349629972331947 9 29.041403979621684 13.996861986129034 17.14504927142003 39.816684762829254 10 17.21850374508815 25.943417649541622 32.0758064701704 24.76227213519983 11 37.91019902952894 20.5177177882755 19.746657760892063 21.825425421303493 12 22.796199260853005 23.07923818082396 28.877054893442565 25.247507664880466 13 32.59271280754141 18.373125714939718 22.874800997721277 26.1593604797976 14 23.764248078708317 18.721262375383244 24.105541906897514 33.408947639010925 15 27.763489917116953 25.452247628171392 20.966195803103254 25.8180666516084 16 25.977026250436758 24.50272895783665 23.485205857222187 26.035038934504406 17 25.85536917080012 24.337653199205747 23.87391506289047 25.93306256710366 18 25.66249819088838 24.44931853263032 24.558077176247743 25.330106100233564 19 27.026825719118087 24.3540638854086 24.045894209813348 24.573216185659966 20 25.96866951724121 23.488839219481118 24.06829994374344 26.474191319534228 21 25.38490931430582 24.770507756320082 24.74029029353328 25.10429263584082 22 26.48557585461222 23.56962097370475 23.178005078229315 26.76679809345371 23 25.664738764281385 23.721979964429384 24.1725168845372 26.440764386752036 24 25.20312008928382 23.572285439361305 24.342437126180013 26.88215734517486 25 26.162388281680045 23.171404470125587 23.58784834103707 27.078358907157302 26 25.680786114258343 23.52359838509159 24.544573179852037 26.251042320798028 27 26.770492011750292 23.957966843147148 23.721616628203492 25.54992451689907 28 25.91477464373369 24.80968751267892 22.937052604424345 26.338485239163045 29 25.876987676240777 24.409412103819694 24.353761105220354 25.359839114719172 30 26.88881850931624 23.72585555083891 23.581368845008637 25.803957094836207 31 25.985140759481713 23.707991519732488 24.238704633687444 26.068163087098355 32 25.442316437996976 23.864347208941947 24.04147361906498 26.6518627339961 33 25.6801199978442 23.427738177493378 24.01894677305959 26.873195051602828 34 26.270117472657432 23.811179007886214 24.707105584901683 25.211597934554668 35 26.029104442814816 23.567622624462338 24.271828786281393 26.131444146441456 36 25.61865561963057 23.43615546672658 24.779106713666227 26.166082199976625 37 24.686213751912813 23.197564678389913 25.454185421376156 26.662036148321118 38 25.807348232944545 22.4687727652854 25.074014617016367 26.649864384753684 39 24.356970575215747 22.899750085232622 26.26939080020565 26.473888539345978 40 25.8812265988762 22.024170336867183 26.33140018275812 25.763202881498497 41 24.98463390544659 22.463262165859355 26.341815821233734 26.210288107460322 42 24.26819542402246 22.474767813012644 27.070910514526485 26.186126248438413 43 23.939133915438337 22.069829589254454 26.605113472931148 27.385923022376062 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 23.0 1 35.0 2 47.0 3 145.0 4 243.0 5 243.0 6 312.5 7 382.0 8 359.0 9 336.0 10 486.5 11 637.0 12 637.0 13 1018.0 14 1399.0 15 2039.5 16 2680.0 17 2591.5 18 2503.0 19 2503.0 20 2943.5 21 3384.0 22 3523.0 23 3662.0 24 4806.0 25 5950.0 26 5950.0 27 7537.0 28 9124.0 29 11115.5 30 13107.0 31 16644.0 32 20181.0 33 20181.0 34 25251.0 35 30321.0 36 35813.5 37 41306.0 38 48684.5 39 56063.0 40 56063.0 41 64188.0 42 72313.0 43 82174.0 44 92035.0 45 105856.5 46 119678.0 47 119678.0 48 135938.5 49 152199.0 50 163880.0 51 175561.0 52 180522.0 53 185483.0 54 185483.0 55 173977.0 56 162471.0 57 147467.0 58 132463.0 59 124256.0 60 116049.0 61 116049.0 62 101718.0 63 87387.0 64 73361.0 65 59335.0 66 49740.0 67 40145.0 68 40145.0 69 32904.0 70 25663.0 71 20848.0 72 16033.0 73 12983.5 74 9934.0 75 9934.0 76 8006.0 77 6078.0 78 4829.0 79 3580.0 80 2761.5 81 1943.0 82 1943.0 83 1436.5 84 930.0 85 697.0 86 464.0 87 320.5 88 177.0 89 177.0 90 121.0 91 65.0 92 43.5 93 22.0 94 13.5 95 5.0 96 5.0 97 3.5 98 2.0 99 1.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 1651363.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 63.48118960854722 #Duplication Level Percentage of deduplicated Percentage of total 1 83.09211579764028 52.74786357925364 2 9.119374115888231 11.578174347239568 3 2.939963615866336 5.598971632231228 4 1.4512106996005703 3.68498326333185 5 0.869948492110741 2.7612682588675845 6 0.5575131956748779 2.1234960530342404 7 0.3791488158595441 1.6848172508605108 8 0.2826336904201856 1.4353538313061787 9 0.21181256290464945 1.2101502120500145 >10 1.0318696907400966 11.03964038879239 >50 0.03909270046892554 1.6941645547088202 >100 0.023024022360090303 2.901213836249118 >500 0.0013373502715032066 0.5991273366031221 >1k 9.552501939308618E-4 0.9407754554717447 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTACGGAAGCAGTGGTATCAACGCAGAGTACGGAAGCAGTGGT 2703 0.16368296976497596 No Hit GTACGGGAAGCAGTGGTATCAACGCAGAGTACGGGAAGCAGTG 2274 0.137704429613598 No Hit GAGTACGGAAGCAGTGGTATCAACGCAGAGTACGGAAGCAGTG 1684 0.10197636740074716 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 1.2111207529779945E-4 2 0.0 0.0 0.0 0.0 1.2111207529779945E-4 3 0.0 0.0 0.0 0.0 1.2111207529779945E-4 4 0.0 0.0 0.0 1.2111207529779945E-4 1.2111207529779945E-4 5 0.0 0.0 0.0 1.2111207529779945E-4 1.2111207529779945E-4 6 0.0 0.0 0.0 1.2111207529779945E-4 1.2111207529779945E-4 7 0.0 0.0 0.0 1.2111207529779945E-4 1.2111207529779945E-4 8 0.0 0.0 0.0 1.2111207529779945E-4 1.2111207529779945E-4 9 0.0 0.0 0.0 1.8166811294669918E-4 1.2111207529779945E-4 10 0.0 0.0 0.0 1.8166811294669918E-4 1.2111207529779945E-4 11 0.0 0.0 0.0 1.8166811294669918E-4 1.2111207529779945E-4 12 0.0 0.0 0.0 1.8166811294669918E-4 1.2111207529779945E-4 13 0.0 0.0 0.0 1.8166811294669918E-4 1.2111207529779945E-4 14 0.0 0.0 0.0 2.422241505955989E-4 1.2111207529779945E-4 15 0.0 0.0 0.0 3.0278018824449865E-4 1.8166811294669918E-4 16 0.0 0.0 0.0 6.055603764889973E-4 2.422241505955989E-4 17 0.0 0.0 0.0 7.872284894356965E-4 2.422241505955989E-4 18 0.0 0.0 0.0 9.083405647334959E-4 2.422241505955989E-4 19 0.0 0.0 0.0 0.0010294526400312955 2.422241505955989E-4 20 0.0 0.0 0.0 0.0012716767906268943 2.422241505955989E-4 21 0.0 0.0 0.0 0.0023616854683070894 2.422241505955989E-4 22 0.0 0.0 0.0 0.0032094699953916857 3.0278018824449865E-4 23 0.0 0.0 0.0 0.0043600347107207805 5.450043388400976E-4 24 0.0 0.0 0.0 0.006237271877836672 5.450043388400976E-4 25 0.0 0.0 0.0 0.008538401308494861 6.66116414137897E-4 26 0.0 0.0 0.0 0.011505647153290948 6.66116414137897E-4 27 0.0 0.0 0.0 0.021194613177114904 6.66116414137897E-4 28 0.0 0.0 0.0 0.058557688406486036 6.66116414137897E-4 29 0.0 0.0 0.0 0.11578314398469627 6.66116414137897E-4 30 0.0 0.0 0.0 0.18778427274923806 6.66116414137897E-4 31 0.0 0.0 0.0 0.5075201515354286 7.266724517867967E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CTTATAC 960 0.0 21.390627 37 TTACATA 260 0.0 19.211538 34 TACTTAC 530 0.0 18.849056 31 GTACTTA 600 0.0 18.808334 30 GTATAGT 115 6.409937E-8 17.69565 1 GTATTAC 105 4.800404E-7 17.619047 1 CTAGTAC 130 1.3942554E-8 17.076923 3 GTTTGCG 80 3.3836847E-4 16.1875 9 TAGATCG 70 0.0025931373 15.857142 5 TCTTATA 1760 0.0 15.767045 37 ACTTACA 460 0.0 15.684781 32 TACATAT 310 0.0 15.516129 35 GTCTTAG 265 0.0 15.358491 1 AGTGTAC 700 0.0 15.328572 27 TAGTACC 145 5.349466E-8 15.310345 4 CGTTACG 525 0.0 15.152382 24 TTAGAAC 175 2.239176E-9 14.8 3 ACGCTCG 75 0.0041054147 14.8 13 TGTACTT 870 0.0 14.459769 29 CTTACAT 385 0.0 14.415584 33 >>END_MODULE