##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2727538.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2548494 Sequences flagged as poor quality 0 Sequence length 43 %GC 51 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.17268747738861 33.0 31.0 34.0 30.0 34.0 2 32.35619075422583 34.0 31.0 34.0 31.0 34.0 3 32.44751998631349 34.0 31.0 34.0 31.0 34.0 4 36.028734617385794 37.0 35.0 37.0 35.0 37.0 5 35.78617881776453 37.0 35.0 37.0 35.0 37.0 6 35.79090042982248 37.0 35.0 37.0 35.0 37.0 7 35.768411069439445 37.0 35.0 37.0 35.0 37.0 8 35.74207904746882 37.0 35.0 37.0 33.0 37.0 9 37.41079633697392 39.0 37.0 39.0 35.0 39.0 10 37.31745807523973 39.0 37.0 39.0 34.0 39.0 11 37.4129513351807 39.0 37.0 39.0 35.0 39.0 12 37.3775241377849 39.0 37.0 39.0 35.0 39.0 13 37.426123820577956 39.0 37.0 39.0 35.0 39.0 14 38.66319128081133 40.0 38.0 41.0 35.0 41.0 15 38.653305834740046 40.0 38.0 41.0 35.0 41.0 16 38.62497302328355 40.0 38.0 41.0 35.0 41.0 17 38.64373586910544 40.0 38.0 41.0 35.0 41.0 18 38.601195451117405 40.0 38.0 41.0 35.0 41.0 19 38.658697254143036 40.0 38.0 41.0 35.0 41.0 20 38.62849745771424 40.0 38.0 41.0 35.0 41.0 21 38.60515112062261 40.0 38.0 41.0 34.0 41.0 22 38.58553679153257 40.0 38.0 41.0 34.0 41.0 23 38.53588511489531 40.0 38.0 41.0 34.0 41.0 24 38.487686845642955 40.0 38.0 41.0 34.0 41.0 25 38.41225641496507 40.0 38.0 41.0 34.0 41.0 26 38.28778329476153 40.0 38.0 41.0 34.0 41.0 27 38.23313611882155 40.0 38.0 41.0 34.0 41.0 28 38.14080040996761 40.0 38.0 41.0 34.0 41.0 29 38.04605975136688 40.0 38.0 41.0 33.0 41.0 30 37.99137961478426 40.0 38.0 41.0 33.0 41.0 31 37.906075117304574 40.0 37.0 41.0 33.0 41.0 32 37.80112921592124 40.0 37.0 41.0 33.0 41.0 33 37.753722786869425 40.0 37.0 41.0 33.0 41.0 34 37.7013518572145 40.0 37.0 41.0 33.0 41.0 35 37.69680446569621 40.0 37.0 41.0 33.0 41.0 36 37.62114134857685 40.0 37.0 41.0 33.0 41.0 37 37.609712245741996 40.0 37.0 41.0 33.0 41.0 38 37.577662729439425 40.0 37.0 41.0 33.0 41.0 39 37.508718874755054 39.0 37.0 41.0 32.0 41.0 40 37.46176369259649 39.0 37.0 41.0 32.0 41.0 41 37.40437097360245 39.0 37.0 41.0 32.0 41.0 42 37.37272404800639 39.0 37.0 40.0 32.0 41.0 43 36.25173730053906 38.0 35.0 40.0 30.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 2.0 10 2.0 11 3.0 12 1.0 13 2.0 14 4.0 15 6.0 16 16.0 17 36.0 18 70.0 19 104.0 20 250.0 21 533.0 22 975.0 23 1702.0 24 2910.0 25 4614.0 26 7234.0 27 11007.0 28 15572.0 29 21818.0 30 30181.0 31 40689.0 32 54044.0 33 73245.0 34 103048.0 35 145742.0 36 220241.0 37 382554.0 38 783495.0 39 648394.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.49776770123845 16.70684725959724 11.969696612980057 27.825688426184247 2 18.81311080190889 19.8752282720697 35.141420776348696 26.170240149672708 3 20.3519411856571 21.779215489618576 29.366873141549483 28.501970183174848 4 15.897663482825545 14.450769748722186 32.925366902963084 36.72619986548919 5 16.376730728029965 35.580974489247374 32.63401836535616 15.408276417366492 6 37.463144900478476 32.42463980688203 14.60839225048205 15.503823042157446 7 30.808862018117367 30.225223210256726 20.047290674413986 18.91862409721192 8 28.256021006916242 34.762491102588434 18.921410056292068 18.06007783420326 9 29.767109516443828 13.795755454005384 17.04304581450849 39.39408921504229 10 17.06109569023902 26.143165336076912 32.26022898229307 24.535509991390995 11 38.068325842634906 20.537266322777295 20.045093298238097 21.349314536349702 12 22.601230373703057 23.02030140153361 28.865204312821614 25.51326391194172 13 32.317478479447075 18.764297659715893 22.90976553211426 26.008458328722767 14 23.79028555688183 19.13023927072224 23.75293016189169 33.32654501050424 15 27.673010020820136 25.984758057111378 20.905366071099245 25.436865850969237 16 25.591349243906404 25.075986052939502 23.606255302151 25.726409401003103 17 25.766511516213104 24.115026364590225 23.518909599159347 26.599552520037324 18 25.282657130054066 25.349873297720144 24.329192064018983 25.038277508206807 19 27.38711568479267 24.23898192422662 23.927817762176407 24.446084628804304 20 25.671828146348393 23.669900733531254 24.05687437364969 26.601396746470662 21 25.48320694496436 24.65954402874796 25.260290979692318 24.59695804659536 22 26.556468251445757 23.266329055512784 23.231759619602794 26.945443073438668 23 25.54179056336801 24.087716117832727 24.603550175123033 25.766943143676222 24 24.919030611804462 23.59566080987438 24.572080609175458 26.913227969145698 25 26.05409312323278 23.164464974216145 23.828896595401048 26.95254530715003 26 25.468727805519652 23.72848435193491 24.621482334272713 26.18130550827273 27 26.78111072657028 24.363094439304152 23.57698311237931 25.27881172174625 28 25.548147258733984 25.32578063750592 22.58871317727254 26.537358926487563 29 25.742654289160576 25.026662805562815 24.246594263121672 24.984088642154937 30 27.525746578175188 23.68728354863696 23.12075288386004 25.66621698932782 31 26.21022454830186 23.944533516657287 24.32946673604097 25.51577519899988 32 25.665079062379586 24.25118520977487 23.954853336911917 26.128882390933626 33 25.511458924368668 23.40162464577119 24.111887255767524 26.97502917409262 34 26.223291088776353 24.03015270979645 25.023523696740114 24.723032504687083 35 26.252131651084916 23.667428685333377 24.02002908384324 26.060410579738463 36 25.568551466081534 23.49932940787775 24.874769177404378 26.057349948636332 37 24.82340550929294 23.622853340051027 25.628233772573132 25.9255073780829 38 26.181776374596133 22.53715331485968 24.76474341316872 26.51632689737547 39 24.223757246436524 23.62379507269784 26.351798356205663 25.800649324659975 40 26.31471763323751 22.03214918300769 26.065119242972518 25.588013940782282 41 24.690111100909007 23.148298563779235 26.021054002873857 26.140536332437904 42 24.539316160838517 23.11973267349266 26.484111793082505 25.85683937258632 43 23.77651271692223 22.561245975073906 25.885169829711195 27.77707147829267 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 40.0 1 69.0 2 98.0 3 198.0 4 298.0 5 298.0 6 360.0 7 422.0 8 423.5 9 425.0 10 543.0 11 661.0 12 661.0 13 1126.0 14 1591.0 15 2213.5 16 2836.0 17 2911.0 18 2986.0 19 2986.0 20 3847.5 21 4709.0 22 5497.5 23 6286.0 24 8157.0 25 10028.0 26 10028.0 27 13007.0 28 15986.0 29 19305.5 30 22625.0 31 28196.0 32 33767.0 33 33767.0 34 41011.5 35 48256.0 36 57293.0 37 66330.0 38 77968.0 39 89606.0 40 89606.0 41 102021.0 42 114436.0 43 129983.0 44 145530.0 45 168464.5 46 191399.0 47 191399.0 48 216672.0 49 241945.0 50 260358.5 51 278772.0 52 280134.0 53 281496.0 54 281496.0 55 259982.0 56 238468.0 57 219814.5 58 201161.0 59 188009.0 60 174857.0 61 174857.0 62 153671.5 63 132486.0 64 110257.5 65 88029.0 66 73239.5 67 58450.0 68 58450.0 69 47980.0 70 37510.0 71 30589.5 72 23669.0 73 19011.5 74 14354.0 75 14354.0 76 11598.0 77 8842.0 78 7006.0 79 5170.0 80 3989.5 81 2809.0 82 2809.0 83 2037.0 84 1265.0 85 918.5 86 572.0 87 401.0 88 230.0 89 230.0 90 145.0 91 60.0 92 41.0 93 22.0 94 14.0 95 6.0 96 6.0 97 5.5 98 5.0 99 3.0 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 2548494.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 57.71666258741715 #Duplication Level Percentage of deduplicated Percentage of total 1 81.77497063639329 47.197783883166565 2 9.256499708335202 10.685085408130162 3 3.1621414162838044 5.475247475320492 4 1.5754943714658032 3.6372910818506647 5 0.9822574327747708 2.834631041072202 6 0.6501077738613746 2.2513230617648308 7 0.44905099596619535 1.814240737310716 8 0.3259890403563145 1.5051999559553049 9 0.2612904026125192 1.3572729004425437 >10 1.4582530233289168 14.94925881308474 >50 0.06711498909852207 2.644205975513918 >100 0.03302425055905877 3.6709837066040976 >500 0.002514651458530107 0.9623779099709004 >1k 0.0012913075057240703 1.015098049812955 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 3.923886028375974E-5 0.0 4 0.0 0.0 0.0 3.923886028375974E-5 3.923886028375974E-5 5 0.0 0.0 0.0 3.923886028375974E-5 3.923886028375974E-5 6 0.0 0.0 0.0 3.923886028375974E-5 1.1771658085127922E-4 7 0.0 0.0 0.0 3.923886028375974E-5 1.5695544113503897E-4 8 0.0 0.0 0.0 3.923886028375974E-5 1.961943014187987E-4 9 0.0 0.0 0.0 7.847772056751949E-5 2.3543316170255844E-4 10 0.0 0.0 0.0 1.1771658085127922E-4 2.3543316170255844E-4 11 0.0 0.0 0.0 1.5695544113503897E-4 2.3543316170255844E-4 12 0.0 0.0 0.0 1.961943014187987E-4 2.3543316170255844E-4 13 0.0 0.0 0.0 1.961943014187987E-4 2.3543316170255844E-4 14 0.0 0.0 0.0 1.961943014187987E-4 3.1391088227007794E-4 15 0.0 0.0 0.0 1.961943014187987E-4 3.531497425538377E-4 16 0.0 0.0 0.0 2.3543316170255844E-4 3.923886028375974E-4 17 0.0 0.0 0.0 4.3162746312135715E-4 3.923886028375974E-4 18 0.0 0.0 0.0 6.278217645401559E-4 4.708663234051169E-4 19 0.0 0.0 0.0 7.455383453914351E-4 4.708663234051169E-4 20 0.0 0.0 0.0 9.417326468102338E-4 4.708663234051169E-4 21 0.0 0.0 0.0 0.0014910766907828702 4.708663234051169E-4 22 0.0 0.0 0.0 0.002550525918444383 4.708663234051169E-4 23 0.0 0.0 0.0 0.0034137808446870976 5.101051836888767E-4 24 0.0 0.0 0.0 0.004590946653199889 5.101051836888767E-4 25 0.0 0.0 0.0 0.005768112461712682 5.101051836888767E-4 26 3.923886028375974E-5 0.0 0.0 0.008240160659589546 5.101051836888767E-4 27 3.923886028375974E-5 0.0 0.0 0.017225859664570527 5.101051836888767E-4 28 7.847772056751949E-5 0.0 0.0 0.04802836498732192 5.493440439726364E-4 29 7.847772056751949E-5 0.0 0.0 0.09550738593067121 5.493440439726364E-4 30 7.847772056751949E-5 0.0 0.0 0.15652381367191762 5.493440439726364E-4 31 7.847772056751949E-5 0.0 0.0 0.4585845601363001 5.493440439726364E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CTTATAC 1560 0.0 20.397436 37 TACTTAC 860 0.0 18.930233 31 CCCGTTA 65 0.0015806477 17.076923 22 GTACTTA 1030 0.0 17.063107 30 ATACCGT 115 1.2435703E-6 16.086956 6 ATTATAC 220 0.0 15.977273 3 AATACCG 70 0.0025936551 15.857142 5 CGTTATG 235 0.0 15.744681 24 TTATACT 295 0.0 15.677966 4 CTCGTTA 1495 0.0 15.468228 22 AGTGTAC 1210 0.0 15.289256 27 TCGTTAT 270 0.0 15.074075 23 CGTTACA 385 0.0 14.896104 24 TTACATA 560 0.0 14.866071 34 TAGTTCG 75 0.0041062296 14.8 7 TCGTTAC 1290 0.0 14.771318 23 CTTACAT 685 0.0 14.3138685 33 ACTTACA 860 0.0 14.197674 32 TCTCGTT 1690 0.0 14.011833 21 GATCTCG 1905 0.0 13.984252 19 >>END_MODULE