##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2727537.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1218851 Sequences flagged as poor quality 0 Sequence length 43 %GC 52 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.08916430310185 33.0 31.0 34.0 30.0 34.0 2 32.27625033740794 34.0 31.0 34.0 30.0 34.0 3 32.36623918756271 34.0 31.0 34.0 30.0 34.0 4 35.96749807810799 37.0 35.0 37.0 35.0 37.0 5 35.70863296662184 37.0 35.0 37.0 33.0 37.0 6 35.718563630829365 37.0 35.0 37.0 33.0 37.0 7 35.693097023344116 37.0 35.0 37.0 33.0 37.0 8 35.66701590268212 37.0 35.0 37.0 33.0 37.0 9 37.331502373957115 39.0 37.0 39.0 34.0 39.0 10 37.2277620480272 39.0 37.0 39.0 34.0 39.0 11 37.331199629815295 39.0 37.0 39.0 34.0 39.0 12 37.28897543670227 39.0 37.0 39.0 34.0 39.0 13 37.340465733711504 39.0 37.0 39.0 34.0 39.0 14 38.55552893667889 40.0 38.0 41.0 35.0 41.0 15 38.543758014720424 40.0 38.0 41.0 35.0 41.0 16 38.508089996234155 40.0 38.0 41.0 34.0 41.0 17 38.52244121717913 40.0 38.0 41.0 34.0 41.0 18 38.47908152842308 40.0 38.0 41.0 34.0 41.0 19 38.5350645813147 40.0 38.0 41.0 34.0 41.0 20 38.518639275842574 40.0 38.0 41.0 34.0 41.0 21 38.48476064752788 40.0 38.0 41.0 34.0 41.0 22 38.47045619193815 40.0 38.0 41.0 34.0 41.0 23 38.41465855957783 40.0 38.0 41.0 34.0 41.0 24 38.35765897554336 40.0 38.0 41.0 34.0 41.0 25 38.2855607453249 40.0 38.0 41.0 34.0 41.0 26 38.16036742801212 40.0 38.0 41.0 34.0 41.0 27 38.100298559873195 40.0 38.0 41.0 34.0 41.0 28 37.99779628518991 40.0 38.0 41.0 33.0 41.0 29 37.89580842941426 40.0 37.0 41.0 33.0 41.0 30 37.83415035964199 40.0 37.0 41.0 33.0 41.0 31 37.751922097122616 40.0 37.0 41.0 33.0 41.0 32 37.658039415810464 39.0 37.0 41.0 33.0 41.0 33 37.60965040025401 39.0 37.0 41.0 33.0 41.0 34 37.55840951847273 39.0 37.0 41.0 32.0 41.0 35 37.549079419879874 39.0 37.0 41.0 33.0 41.0 36 37.46920501357426 39.0 37.0 40.0 32.0 41.0 37 37.46633181578388 39.0 37.0 40.0 32.0 41.0 38 37.43649962136471 39.0 37.0 40.0 32.0 41.0 39 37.37789852902446 39.0 37.0 40.0 32.0 41.0 40 37.33343534197371 39.0 36.0 40.0 32.0 41.0 41 37.283772175598166 39.0 36.0 40.0 32.0 41.0 42 37.246677403554656 39.0 36.0 40.0 32.0 41.0 43 36.10208138648613 38.0 35.0 40.0 29.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 1.0 9 2.0 10 0.0 11 2.0 12 1.0 13 1.0 14 1.0 15 2.0 16 4.0 17 9.0 18 19.0 19 58.0 20 139.0 21 236.0 22 476.0 23 905.0 24 1457.0 25 2372.0 26 3626.0 27 5571.0 28 7826.0 29 11211.0 30 15460.0 31 20750.0 32 28102.0 33 37797.0 34 52502.0 35 73984.0 36 112535.0 37 190702.0 38 373595.0 39 279505.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.331547498422694 16.556002333345095 12.146439556598796 27.96601061163341 2 18.7550406079168 20.022217645963288 34.58650811296869 26.636233633151225 3 20.68259368864611 21.50894572019057 29.378242295407723 28.430218295755594 4 16.408568397613816 14.423830312318733 32.0367296740947 37.13087161597275 5 16.8127195202695 34.92773111725715 32.44440870951412 15.815140652959222 6 38.04304217660731 31.719873881220924 14.237343202737659 15.999740739434106 7 30.83174235406953 29.997514052168807 19.669344325106188 19.50139926865548 8 28.53359434418153 34.35448631539048 18.91199170366189 18.199927636766102 9 29.639553973373285 13.698721172645383 16.684894215946002 39.97683063803533 10 17.24689892365843 26.11959952447018 31.910463214945878 24.723038336925516 11 38.43398413751968 20.3964225323686 19.196357881316093 21.973235448795627 12 22.886390543224724 22.955307908842016 28.515052291051163 25.643249256882093 13 33.004280260671734 18.186554386057033 22.431700019116366 26.37746533415487 14 23.91055182298739 18.892383072254116 23.748596013786756 33.44846909097174 15 28.404538372614862 25.407453413091506 20.615973568549396 25.57203464574423 16 25.96609429700595 24.64189634335944 23.547915208667835 25.84409415096677 17 26.189911646296387 23.97873078825878 23.390800023956988 26.44055754148784 18 25.82809547680561 24.84946888504009 24.119847298808466 25.202588339345827 19 27.573427761063495 24.289597333882483 23.774275936927484 24.36269896812654 20 26.1585706538371 23.160419116036334 23.58270206940799 27.098308160718577 21 25.478011668366356 24.92306278618141 24.6413220319793 24.957603513472932 22 27.10421536348577 23.2640412979109 22.462466700195513 27.169276638407812 23 25.93770690593026 23.732023028245454 23.79454092419828 26.535729141626007 24 25.14023453235875 23.338209510432367 24.217480233432962 27.304075723775917 25 26.40708339247373 22.670367419807672 23.227531503030313 27.695017684688285 26 25.700270172482114 23.3716016149636 24.363191235023805 26.56493697753048 27 27.383412738718675 23.848198016000318 23.246155600643554 25.52223364463745 28 25.96100753906753 25.153279605136312 22.11107018003021 26.774642675765946 29 26.17243617144343 24.58602405051971 23.930570676809555 25.310969101227304 30 27.682382834325114 23.337635199052222 22.86284377663882 26.117138189983848 31 26.228062330834533 23.60222865633289 24.048058376290456 26.12165063654212 32 25.73079072011263 23.677135269200257 23.55718623523302 27.0348877754541 33 25.8742044761829 23.03956759275744 23.6025568342644 27.48367109679526 34 26.59225779032876 23.636687339141535 24.74018563384696 25.030869236682747 35 26.431778781819926 23.05728920105903 23.918920360240918 26.59201165688013 36 25.600832259234313 23.06877542866191 24.866944359893047 26.46344795221073 37 24.591028763975253 22.770707822367132 25.710033465944566 26.92822994771305 38 26.030253082616333 21.741295695700295 25.044734754289085 27.18371646739429 39 24.081122302890183 22.540080780997844 26.711550468432975 26.667246447679005 40 26.18662986698128 21.178962810056355 26.71901651637485 25.915390806587517 41 24.82321465051922 21.91613248871273 26.699079707035562 26.561573153732493 42 23.96248598064899 21.929341650456045 27.631843432872433 26.47632893602253 43 23.442077825755568 21.30974171576345 26.9733544132958 28.27482604518518 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 11.0 1 19.0 2 27.0 3 61.0 4 95.0 5 95.0 6 134.5 7 174.0 8 149.5 9 125.0 10 165.5 11 206.0 12 206.0 13 407.5 14 609.0 15 883.5 16 1158.0 17 1113.5 18 1069.0 19 1069.0 20 1270.5 21 1472.0 22 1638.5 23 1805.0 24 2378.5 25 2952.0 26 2952.0 27 3950.5 28 4949.0 29 6297.0 30 7645.0 31 9900.5 32 12156.0 33 12156.0 34 15492.5 35 18829.0 36 23049.0 37 27269.0 38 32468.0 39 37667.0 40 37667.0 41 43931.0 42 50195.0 43 58128.0 44 66061.0 45 78216.5 46 90372.0 47 90372.0 48 103770.5 49 117169.0 50 128394.5 51 139620.0 52 143796.0 53 147972.0 54 147972.0 55 135821.0 56 123670.0 57 111380.5 58 99091.0 59 92738.0 60 86385.0 61 86385.0 62 75491.0 63 64597.0 64 53559.5 65 42522.0 66 35250.0 67 27978.0 68 27978.0 69 22973.5 70 17969.0 71 14614.5 72 11260.0 73 9000.5 74 6741.0 75 6741.0 76 5502.0 77 4263.0 78 3334.5 79 2406.0 80 1858.0 81 1310.0 82 1310.0 83 956.0 84 602.0 85 449.5 86 297.0 87 203.0 88 109.0 89 109.0 90 69.0 91 29.0 92 20.0 93 11.0 94 6.5 95 2.0 96 2.0 97 1.5 98 1.0 99 1.0 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 1218851.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 67.91080948698792 #Duplication Level Percentage of deduplicated Percentage of total 1 85.6295700841561 58.15173420437806 2 8.021328657487299 10.89469844582273 3 2.5208835629783963 5.135857301529156 4 1.2108297845095972 3.2891372326800763 5 0.7083404168400302 2.405198554997845 6 0.4340179799251025 1.7684707409172589 7 0.31075253380620094 1.477241928463818 8 0.2196225357953328 1.1931795349956824 9 0.1639904760241464 1.0023053377460642 >10 0.715534771452158 8.14459245504177 >50 0.03459132895267642 1.6255257051679757 >100 0.02836522811065013 3.6202136472251873 >500 0.001448426641595723 0.6699396229622311 >1k 7.242133207978615E-4 0.6219052880722437 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTACGGAAGCAGTGGTATCAACGCAGAGTACGGAAGCAGTGGT 1738 0.1425933112414889 No Hit GTACGGGAAGCAGTGGTATCAACGCAGAGTACGGGAAGCAGTG 1663 0.1364399750256594 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 2.461334486331799E-4 2 0.0 0.0 0.0 8.204448287772664E-5 2.461334486331799E-4 3 0.0 0.0 0.0 1.640889657554533E-4 2.461334486331799E-4 4 0.0 0.0 0.0 1.640889657554533E-4 2.461334486331799E-4 5 0.0 0.0 0.0 1.640889657554533E-4 2.461334486331799E-4 6 0.0 0.0 0.0 1.640889657554533E-4 2.461334486331799E-4 7 0.0 0.0 0.0 1.640889657554533E-4 3.281779315109066E-4 8 0.0 0.0 0.0 1.640889657554533E-4 3.281779315109066E-4 9 0.0 0.0 0.0 2.461334486331799E-4 3.281779315109066E-4 10 0.0 0.0 0.0 2.461334486331799E-4 3.281779315109066E-4 11 0.0 0.0 0.0 2.461334486331799E-4 3.281779315109066E-4 12 0.0 0.0 0.0 2.461334486331799E-4 3.281779315109066E-4 13 0.0 0.0 0.0 2.461334486331799E-4 3.281779315109066E-4 14 0.0 0.0 0.0 2.461334486331799E-4 3.281779315109066E-4 15 0.0 0.0 0.0 3.281779315109066E-4 3.281779315109066E-4 16 0.0 0.0 0.0 4.1022241438863323E-4 4.1022241438863323E-4 17 0.0 0.0 0.0 4.1022241438863323E-4 4.1022241438863323E-4 18 0.0 0.0 0.0 5.743113801440865E-4 4.1022241438863323E-4 19 0.0 0.0 0.0 9.024893116549931E-4 4.1022241438863323E-4 20 0.0 0.0 0.0 0.0010665782774104465 4.1022241438863323E-4 21 0.0 0.0 0.0 0.0015588451746768063 4.1022241438863323E-4 22 0.0 0.0 0.0 0.002789512417842706 4.1022241438863323E-4 23 0.0 0.0 0.0 0.003692001729497699 4.1022241438863323E-4 24 0.0 0.0 0.0 0.004922668972663599 4.1022241438863323E-4 25 0.0 0.0 0.0 0.006317425181584952 4.922668972663598E-4 26 0.0 0.0 0.0 0.009435115530938565 4.922668972663598E-4 27 0.0 0.0 0.0 0.023300633137274367 5.743113801440865E-4 28 0.0 0.0 0.0 0.07334776769268762 5.743113801440865E-4 29 0.0 0.0 0.0 0.14882869194019613 5.743113801440865E-4 30 0.0 0.0 0.0 0.24441051449274767 5.743113801440865E-4 31 0.0 0.0 0.0 0.6660371120013849 5.743113801440865E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CTTATAC 905 0.0 23.099447 37 TCGTATA 45 0.0038259383 20.555557 2 TCGTTAC 645 0.0 18.930235 23 GTATTAT 70 1.2192743E-4 18.5 1 CTAGTAC 60 9.2372514E-4 18.5 3 GTATACG 50 0.007035121 18.5 1 ACATATA 180 0.0 17.472223 36 CGTTACG 535 0.0 17.289719 24 GATACCG 65 0.0015800081 17.076923 5 TCTTATA 1585 0.0 16.807571 37 GTATAGG 90 4.4463108E-5 16.444445 1 ACTTACA 410 0.0 16.243902 32 CATATAA 160 6.2937033E-10 16.1875 37 TTAGAGT 80 3.3827763E-4 16.1875 4 TTACATA 230 0.0 16.086956 34 CGTTACA 150 4.671165E-9 16.033333 24 GTTACGG 820 0.0 16.018291 25 AGGGCGT 625 0.0 15.983999 10 CTCGTTA 755 0.0 15.927153 22 TTCGTTA 105 9.343947E-6 15.857142 22 >>END_MODULE