##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2727535.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2753481 Sequences flagged as poor quality 0 Sequence length 43 %GC 51 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.19641174208211 33.0 31.0 34.0 30.0 34.0 2 32.38572919152157 34.0 31.0 34.0 31.0 34.0 3 32.47773491082742 34.0 31.0 34.0 31.0 34.0 4 36.050224061833006 37.0 35.0 37.0 35.0 37.0 5 35.80878458939793 37.0 35.0 37.0 35.0 37.0 6 35.8148612610728 37.0 35.0 37.0 35.0 37.0 7 35.7932885681797 37.0 35.0 37.0 35.0 37.0 8 35.769339973655164 37.0 35.0 37.0 35.0 37.0 9 37.43585446930631 39.0 37.0 39.0 35.0 39.0 10 37.35113552626657 39.0 37.0 39.0 34.0 39.0 11 37.44272795054696 39.0 37.0 39.0 35.0 39.0 12 37.40590692290958 39.0 37.0 39.0 35.0 39.0 13 37.45289072268884 39.0 37.0 39.0 35.0 39.0 14 38.70657869075545 40.0 38.0 41.0 35.0 41.0 15 38.70010506700427 40.0 38.0 41.0 35.0 41.0 16 38.68154964570302 40.0 38.0 41.0 35.0 41.0 17 38.690222304058025 40.0 38.0 41.0 35.0 41.0 18 38.65707190280231 40.0 38.0 41.0 35.0 41.0 19 38.7010693010048 40.0 38.0 41.0 35.0 41.0 20 38.67808385095085 40.0 38.0 41.0 35.0 41.0 21 38.65194493806204 40.0 38.0 41.0 35.0 41.0 22 38.624326806685794 40.0 38.0 41.0 35.0 41.0 23 38.57455962107601 40.0 38.0 41.0 34.0 41.0 24 38.525865985637815 40.0 38.0 41.0 34.0 41.0 25 38.458198186223186 40.0 38.0 41.0 34.0 41.0 26 38.335756084752354 40.0 38.0 41.0 34.0 41.0 27 38.27958464213118 40.0 38.0 41.0 34.0 41.0 28 38.20204679095298 40.0 38.0 41.0 34.0 41.0 29 38.112564059821004 40.0 38.0 41.0 34.0 41.0 30 38.05327619838307 40.0 38.0 41.0 34.0 41.0 31 37.97699021711063 40.0 38.0 41.0 33.0 41.0 32 37.87508975002915 40.0 37.0 41.0 33.0 41.0 33 37.821738374079935 40.0 37.0 41.0 33.0 41.0 34 37.77193341809876 40.0 37.0 41.0 33.0 41.0 35 37.75839382948348 40.0 37.0 41.0 33.0 41.0 36 37.69220706443952 40.0 37.0 41.0 33.0 41.0 37 37.66502401868762 40.0 37.0 41.0 33.0 41.0 38 37.62917848352685 40.0 37.0 41.0 33.0 41.0 39 37.574118361448654 40.0 37.0 41.0 33.0 41.0 40 37.514828320950826 39.0 37.0 41.0 33.0 41.0 41 37.46581545323901 39.0 37.0 41.0 32.0 41.0 42 37.421035046183356 39.0 37.0 41.0 32.0 41.0 43 36.32239663175449 38.0 35.0 40.0 30.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 2.0 10 2.0 11 2.0 12 1.0 13 5.0 14 5.0 15 8.0 16 13.0 17 30.0 18 64.0 19 142.0 20 250.0 21 531.0 22 986.0 23 1836.0 24 3101.0 25 4932.0 26 7581.0 27 11392.0 28 16391.0 29 23306.0 30 32162.0 31 43197.0 32 56975.0 33 76820.0 34 106985.0 35 152012.0 36 232513.0 37 405851.0 38 845134.0 39 731252.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.17135291654455 17.22859173533429 12.101445406741503 27.49860994137966 2 18.64737762853639 19.86754221292974 35.13447160158359 26.350608556950274 3 20.251964694871692 21.77204055520993 29.264156898122778 28.7118378517956 4 15.581186142196005 14.623162462352202 33.27696831755876 36.51868307789304 5 16.230110176899714 35.201405057815904 33.148912231462646 15.419572533821732 6 37.144472760117104 32.89861088563894 14.696124650941844 15.260791703302113 7 30.678148859570847 29.688020364041005 20.377369591437166 19.256461184950975 8 27.952035986447697 34.47468858510373 19.04520132879072 18.52807409965785 9 28.521496970561987 13.946637002398054 17.615556453812463 39.91630957322749 10 16.866831476229542 26.16393575986179 32.72759100208064 24.241641761828028 11 37.77106143096684 20.599524747038387 20.42465519101094 21.204758630983836 12 22.414899539891504 23.336496601937693 29.49063385583558 24.757970002335224 13 31.879755117249765 18.81770747646343 23.344304899870384 25.958232506416422 14 23.408877707890486 18.996281434300798 24.320777953434217 33.2740629043745 15 26.658146542503836 26.243289857456798 21.330744610186162 25.767818989853208 16 25.69943282702877 24.9999909205838 23.608370640654503 25.69220561173293 17 25.456612920154527 24.720054360280677 24.152954024378595 25.6703786951862 18 25.35851890752106 24.947838753926394 24.714643028225 24.978999310327545 19 26.64510850083948 24.482246291149277 24.45943879765286 24.413206410358377 20 25.7179185184136 23.940096190966997 24.524229511661783 25.81775577895762 21 25.293147110875285 24.647927477981508 25.176785312845812 24.88214009829739 22 26.14436053853286 23.764645552302703 23.911441553437268 26.17955235572717 23 25.494455926879468 24.105850013128833 24.655372599266165 25.744321460725534 24 25.1596433750587 24.026096421220995 24.689765427834804 26.124494775885506 25 25.905717163110985 23.650535449491024 24.21549304316972 26.22825434422827 26 25.39647086724041 24.071892996537837 24.75688047239113 25.774755663830618 27 26.122497304321328 24.508322374477977 24.073236750135553 25.295943571065138 28 25.527359731191172 24.995088035835366 23.57731903724776 25.900233195725704 29 25.508147686510274 24.90796195797247 24.514060565516886 25.069829790000362 30 26.54654235856358 24.11307722842467 23.849774158601424 25.490606254410324 31 25.808567409762407 24.097351679564884 24.612190895815154 25.481890014857555 32 25.310506954651224 24.39101631716362 24.453918512602772 25.844558215582385 33 25.31166911992492 23.875632335941305 24.50665176189703 26.30604678223674 34 25.78100230217677 24.07835754087281 25.154704172645463 24.98593598430496 35 25.744103554736714 23.842038495998338 24.623994136876195 25.789863812388752 36 25.342212276024423 23.75008216871662 25.13770750551756 25.7699980497414 37 24.780160095529986 23.581422933370522 25.698851744391916 25.939565226707572 38 25.47793138939401 22.939762431627457 25.409908403217603 26.172397775760935 39 24.415385470246573 23.428997694191462 26.406392490088 25.749224345473966 40 25.549404553726717 22.630626468822555 26.38812470469199 25.431844272758735 41 24.52477427663383 23.0693438596453 26.474814970577242 25.931066893143623 42 24.14431042015543 23.245557169270462 26.824917259280163 25.785215151293944 43 23.788978387720853 22.808074579051027 26.52972727975969 26.87321975346843 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 81.0 1 126.5 2 172.0 3 379.0 4 586.0 5 586.0 6 741.0 7 896.0 8 846.0 9 796.0 10 1049.0 11 1302.0 12 1302.0 13 2233.0 14 3164.0 15 4246.0 16 5328.0 17 5094.5 18 4861.0 19 4861.0 20 5882.0 21 6903.0 22 7452.0 23 8001.0 24 10369.5 25 12738.0 26 12738.0 27 16360.5 28 19983.0 29 23947.5 30 27912.0 31 34937.0 32 41962.0 33 41962.0 34 50537.5 35 59113.0 36 69501.5 37 79890.0 38 93036.5 39 106183.0 40 106183.0 41 120033.0 42 133883.0 43 150739.0 44 167595.0 45 188269.0 46 208943.0 47 208943.0 48 230203.0 49 251463.0 50 266042.5 51 280622.0 52 281477.5 53 282333.0 54 282333.0 55 266685.5 56 251038.0 57 232890.5 58 214743.0 59 200185.5 60 185628.0 61 185628.0 62 162369.5 63 139111.0 64 116732.0 65 94353.0 66 78522.0 67 62691.0 68 62691.0 69 51412.5 70 40134.0 71 32734.0 72 25334.0 73 20331.5 74 15329.0 75 15329.0 76 12211.0 77 9093.0 78 7358.0 79 5623.0 80 4379.0 81 3135.0 82 3135.0 83 2309.0 84 1483.0 85 1099.0 86 715.0 87 470.5 88 226.0 89 226.0 90 159.0 91 92.0 92 60.0 93 28.0 94 19.5 95 11.0 96 11.0 97 6.5 98 2.0 99 2.0 100 2.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 2753481.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 60.082760837400414 #Duplication Level Percentage of deduplicated Percentage of total 1 81.15543725153674 48.76042727038738 2 9.753095455837439 11.719858033948352 3 3.4172531479759316 6.159540108320749 4 1.6113769563892 3.87263905158522 5 0.9769191738674705 2.9348000540475017 6 0.636460049311026 2.294416615518867 7 0.44070694525836596 1.8535222993937803 8 0.3241332099482697 1.557985450622463 9 0.24903283790714206 1.346632239657053 >10 1.360676311983254 14.314808250700858 >50 0.052449725740460175 2.1226277619760268 >100 0.020826809353653362 2.1726979276365546 >500 0.0012089814008280745 0.5020803557727047 >1k 4.2314349024037635E-4 0.3879645804324751 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 3.631766480320729E-5 5 0.0 3.631766480320729E-5 0.0 0.0 3.631766480320729E-5 6 0.0 3.631766480320729E-5 0.0 0.0 3.631766480320729E-5 7 0.0 3.631766480320729E-5 0.0 0.0 7.263532960641458E-5 8 0.0 3.631766480320729E-5 0.0 0.0 7.263532960641458E-5 9 0.0 7.263532960641458E-5 0.0 7.263532960641458E-5 1.8158832401603644E-4 10 0.0 7.263532960641458E-5 0.0 7.263532960641458E-5 1.8158832401603644E-4 11 0.0 7.263532960641458E-5 0.0 7.263532960641458E-5 1.8158832401603644E-4 12 0.0 7.263532960641458E-5 0.0 1.0895299440962186E-4 1.8158832401603644E-4 13 0.0 7.263532960641458E-5 0.0 1.0895299440962186E-4 1.8158832401603644E-4 14 0.0 7.263532960641458E-5 0.0 1.0895299440962186E-4 2.1790598881924373E-4 15 0.0 7.263532960641458E-5 0.0 1.8158832401603644E-4 2.54223653622451E-4 16 3.631766480320729E-5 7.263532960641458E-5 0.0 2.1790598881924373E-4 2.54223653622451E-4 17 3.631766480320729E-5 7.263532960641458E-5 0.0 4.7212964244169474E-4 2.54223653622451E-4 18 3.631766480320729E-5 7.263532960641458E-5 0.0 5.810826368513166E-4 2.905413184256583E-4 19 7.263532960641458E-5 7.263532960641458E-5 0.0 7.62670960867353E-4 2.905413184256583E-4 20 7.263532960641458E-5 7.263532960641458E-5 0.0 0.0011621652737026332 3.268589832288656E-4 21 7.263532960641458E-5 7.263532960641458E-5 0.0 0.0017069302457507424 3.268589832288656E-4 22 7.263532960641458E-5 7.263532960641458E-5 0.0 0.002215377552995644 3.268589832288656E-4 23 7.263532960641458E-5 7.263532960641458E-5 0.0 0.0024696012066180956 3.631766480320729E-4 24 7.263532960641458E-5 7.263532960641458E-5 0.0 0.0035954488155175214 3.631766480320729E-4 25 7.263532960641458E-5 7.263532960641458E-5 0.0 0.004612343430007325 3.9949431283528016E-4 26 7.263532960641458E-5 7.263532960641458E-5 0.0 0.006900356312609384 3.9949431283528016E-4 27 7.263532960641458E-5 7.263532960641458E-5 0.0 0.017214573116720252 3.9949431283528016E-4 28 7.263532960641458E-5 7.263532960641458E-5 0.0 0.05171635467976717 3.9949431283528016E-4 29 7.263532960641458E-5 7.263532960641458E-5 0.0 0.0987114129351174 3.9949431283528016E-4 30 7.263532960641458E-5 7.263532960641458E-5 0.0 0.16339317394962957 3.9949431283528016E-4 31 7.263532960641458E-5 7.263532960641458E-5 0.0 0.4639218501961699 3.9949431283528016E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CTTATAC 1500 0.0 19.609999 37 TATACCG 100 5.883785E-6 16.650002 5 CATATAC 225 0.0 15.622222 3 TCTTATA 2655 0.0 15.608286 37 CGTTACG 605 0.0 14.677686 24 TTAGACT 270 0.0 14.388889 4 TCTATAC 265 0.0 13.962264 3 GTCTTAG 345 0.0 13.942028 1 TACGGAT 1360 0.0 13.73897 27 TCGTTAC 730 0.0 13.684932 23 GGACCGT 190 7.1377144E-9 13.631579 6 GTTACGG 1095 0.0 13.178082 25 GTCTAGA 295 0.0 13.169492 1 TATACTA 240 8.185452E-11 13.104166 5 TTAGACG 85 0.0094090905 13.058823 4 ACGGATG 1520 0.0 12.657895 28 TACTTAC 745 0.0 12.416107 31 GTACTTA 760 0.0 12.414474 30 TTACGGA 1550 0.0 12.412903 26 CTCGTTA 865 0.0 12.404624 22 >>END_MODULE