##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2727534.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1566095 Sequences flagged as poor quality 0 Sequence length 43 %GC 52 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.08959418170673 33.0 31.0 34.0 30.0 34.0 2 32.283035831159665 34.0 31.0 34.0 30.0 34.0 3 32.372622989026844 34.0 31.0 34.0 30.0 34.0 4 35.976532713532706 37.0 35.0 37.0 35.0 37.0 5 35.69669272936827 37.0 35.0 37.0 33.0 37.0 6 35.70038854603329 37.0 35.0 37.0 33.0 37.0 7 35.67480197561451 37.0 35.0 37.0 33.0 37.0 8 35.64926584913431 37.0 35.0 37.0 33.0 37.0 9 37.311115864618685 39.0 37.0 39.0 34.0 39.0 10 37.20138433492221 39.0 37.0 39.0 34.0 39.0 11 37.30822459684757 39.0 37.0 39.0 34.0 39.0 12 37.26748185774171 39.0 37.0 39.0 34.0 39.0 13 37.32422809599673 39.0 37.0 39.0 34.0 39.0 14 38.531451157177564 40.0 38.0 41.0 35.0 41.0 15 38.5196536608571 40.0 38.0 41.0 34.0 41.0 16 38.493459847582685 40.0 38.0 41.0 34.0 41.0 17 38.50808220446397 40.0 38.0 41.0 34.0 41.0 18 38.461043550997864 40.0 38.0 41.0 34.0 41.0 19 38.51698587888985 40.0 38.0 41.0 34.0 41.0 20 38.48992302510384 40.0 38.0 41.0 34.0 41.0 21 38.4592690737152 40.0 38.0 41.0 34.0 41.0 22 38.43864133401869 40.0 38.0 41.0 34.0 41.0 23 38.38704676280813 40.0 38.0 41.0 34.0 41.0 24 38.334810468075055 40.0 38.0 41.0 34.0 41.0 25 38.25554707728458 40.0 38.0 41.0 34.0 41.0 26 38.12977245952512 40.0 38.0 41.0 34.0 41.0 27 38.06324392836961 40.0 38.0 41.0 34.0 41.0 28 37.964813756509024 40.0 37.0 41.0 33.0 41.0 29 37.86695251565199 40.0 37.0 41.0 33.0 41.0 30 37.805255109045106 40.0 37.0 41.0 33.0 41.0 31 37.719686225931376 40.0 37.0 41.0 33.0 41.0 32 37.612761039400546 39.0 37.0 41.0 33.0 41.0 33 37.561766687206074 39.0 37.0 41.0 33.0 41.0 34 37.50710078251958 39.0 37.0 40.0 32.0 41.0 35 37.49469732040521 39.0 37.0 40.0 32.0 41.0 36 37.41303177648866 39.0 37.0 40.0 32.0 41.0 37 37.40284848620294 39.0 37.0 40.0 32.0 41.0 38 37.3687732864226 39.0 37.0 40.0 32.0 41.0 39 37.29323316912448 39.0 36.0 40.0 32.0 41.0 40 37.24889805535424 39.0 36.0 40.0 32.0 41.0 41 37.19230570303845 39.0 36.0 40.0 31.0 41.0 42 37.157969982663886 39.0 36.0 40.0 31.0 41.0 43 36.01174832944361 38.0 35.0 40.0 29.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 1.0 9 0.0 10 2.0 11 2.0 12 1.0 13 0.0 14 2.0 15 4.0 16 9.0 17 25.0 18 36.0 19 77.0 20 157.0 21 317.0 22 663.0 23 1164.0 24 1979.0 25 3240.0 26 4849.0 27 7176.0 28 10331.0 29 14741.0 30 19963.0 31 27029.0 32 36010.0 33 48464.0 34 67916.0 35 96041.0 36 147838.0 37 253765.0 38 483015.0 39 341278.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.2707466660707 16.78467781328719 12.099712980374754 27.84486254026735 2 18.916413116701094 19.907540730287753 34.66833110379638 26.507715049214763 3 20.4786427387866 21.54601093803377 29.412838940166463 28.562507383013163 4 16.018823889993904 14.475622487780115 32.75369629556317 36.751857326662815 5 16.526392077108987 35.232856244352995 32.73977632263688 15.500975355901142 6 37.58545937506984 32.34280168189031 14.490436403921855 15.581302539117997 7 30.793214970994736 30.039620840370475 19.918268048873152 19.248896139761637 8 28.44814650452239 34.291278626136986 18.93046079580102 18.3301140735396 9 29.499232166631018 13.56482205741031 16.944629795765902 39.99131598019277 10 17.01978487895051 26.12146772705359 32.26905136661569 24.589696027380203 11 38.37091619601621 20.425069998946423 19.745673155204504 21.458340649832863 12 22.702198781044572 23.028488054683784 28.904951487617293 25.36436167665435 13 32.55715649433783 18.465227205246173 22.77773698275009 26.199879317665914 14 23.745813631995503 18.844195275510106 23.945609940648556 33.464381151845835 15 27.66415830457284 25.764082000134092 20.8753619671859 25.696397728107172 16 25.747416344474633 24.800475066965923 23.485740009386404 25.96636857917304 17 25.878379025538038 24.08972635759644 23.556680788841035 26.47521382802448 18 25.643718931482447 24.988394701470856 24.274325631586848 25.093560735459853 19 27.48377333431241 24.11437364910813 23.952442220938067 24.449410795641388 20 26.008703175733274 23.355352006104354 23.974343829716588 26.661600988445784 21 25.586378859520014 24.60412682500104 24.97243142976639 24.83706288571255 22 26.76919343973386 23.15236304311041 23.14227425539319 26.936169261762537 23 25.716447597367974 23.894974442802 24.394752553325308 25.993825406504712 24 25.22541735973871 23.39972990144276 24.5149240627165 26.859928676102022 25 26.279440263840954 22.856148573362407 23.80979442498699 27.05461673780965 26 25.62009328935984 23.542696962827925 24.598571606447887 26.23863814136435 27 26.9721824027278 23.98641206312516 23.557830144403756 25.48357538974328 28 25.64869947225424 25.110992628161128 22.69868686126959 26.541621038315043 29 25.894150737982052 24.709803683684576 24.134551224542573 25.2614943537908 30 27.38045903984113 23.622641027523873 23.127843457772357 25.869056474862635 31 26.105121336828223 23.845296741257716 24.367614991427722 25.68196693048634 32 25.698696439232616 23.917642288622336 23.94956883203126 26.434092440113787 33 25.591806371899533 23.28990259211606 24.05920458209751 27.0590864538869 34 26.127469917214473 23.79434197797707 25.049949077163262 25.028239027645192 35 26.18059568544692 23.272726111762058 24.203257145958577 26.34342105683244 36 25.54678994569295 23.17643565684074 25.085323687260352 26.19145071020596 37 24.879716747706876 23.195974701407003 25.721236578879314 26.203071972006807 38 26.146498137086194 22.197376276662656 24.996440190409906 26.659685395841247 39 24.197638074318608 23.220366580571422 26.508928257864305 26.073067087245665 40 26.165334797697458 21.76668720607626 26.290550700947264 25.777427295279022 41 24.70654717625687 22.600863932264645 26.400250304100325 26.29233858737816 42 24.342712287568762 22.57168307158889 26.972884786682798 26.11271985415955 43 23.736427228233282 22.178475762964574 26.35382910998375 27.731267898818402 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 24.0 1 40.0 2 56.0 3 127.5 4 199.0 5 199.0 6 247.0 7 295.0 8 295.0 9 295.0 10 395.5 11 496.0 12 496.0 13 806.5 14 1117.0 15 1581.5 16 2046.0 17 1981.5 18 1917.0 19 1917.0 20 2260.5 21 2604.0 22 2853.5 23 3103.0 24 4095.0 25 5087.0 26 5087.0 27 6596.0 28 8105.0 29 10028.0 30 11951.0 31 15319.0 32 18687.0 33 18687.0 34 23364.5 35 28042.0 36 33647.0 37 39252.0 38 46493.5 39 53735.0 40 53735.0 41 61741.0 42 69747.0 43 79642.0 44 89537.0 45 103277.5 46 117018.0 47 117018.0 48 133269.5 49 149521.0 50 160313.0 51 171105.0 52 172459.5 53 173814.0 54 173814.0 55 161830.0 56 149846.0 57 137685.0 58 125524.0 59 117566.0 60 109608.0 61 109608.0 62 95845.5 63 82083.0 64 68667.5 65 55252.0 66 46023.5 67 36795.0 68 36795.0 69 29939.5 70 23084.0 71 18914.5 72 14745.0 73 11956.0 74 9167.0 75 9167.0 76 7439.0 77 5711.0 78 4516.0 79 3321.0 80 2568.5 81 1816.0 82 1816.0 83 1312.0 84 808.0 85 591.0 86 374.0 87 255.0 88 136.0 89 136.0 90 90.5 91 45.0 92 30.5 93 16.0 94 12.0 95 8.0 96 8.0 97 5.0 98 2.0 99 1.5 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 1566095.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 65.76486531791149 #Duplication Level Percentage of deduplicated Percentage of total 1 84.44350580092639 55.53415785970203 2 8.45050208663221 11.114922631921946 3 2.7247026678723167 5.375691119519312 4 1.3050412889061362 3.4330345839690266 5 0.7852086129137512 2.581956933736848 6 0.4889914335398622 1.9295073461016905 7 0.33115161346009075 1.5244698881308372 8 0.25899076735155596 1.3625994346766102 9 0.20625563648765766 1.2207936739203826 >10 0.9431653149450094 10.35122071341375 >50 0.03728530549149053 1.6875001912058756 >100 0.02296182295511413 2.8127026625776463 >500 0.0019457813203917148 0.8479537539577685 >1k 2.9186719805875724E-4 0.2234892071662631 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 6.385308681784949E-5 8 0.0 0.0 0.0 0.0 6.385308681784949E-5 9 0.0 0.0 0.0 1.2770617363569897E-4 6.385308681784949E-5 10 0.0 0.0 0.0 1.2770617363569897E-4 6.385308681784949E-5 11 0.0 0.0 0.0 2.5541234727139794E-4 6.385308681784949E-5 12 0.0 0.0 0.0 2.5541234727139794E-4 6.385308681784949E-5 13 0.0 0.0 0.0 2.5541234727139794E-4 6.385308681784949E-5 14 0.0 0.0 0.0 3.1926543408924746E-4 1.2770617363569897E-4 15 0.0 0.0 0.0 3.8311852090709697E-4 1.2770617363569897E-4 16 0.0 0.0 0.0 5.108246945427959E-4 1.2770617363569897E-4 17 0.0 0.0 0.0 5.746777813606455E-4 1.2770617363569897E-4 18 0.0 0.0 0.0 7.662370418141939E-4 1.2770617363569897E-4 19 0.0 0.0 0.0 9.577963022677424E-4 1.2770617363569897E-4 20 0.0 0.0 0.0 0.0013409148231748394 1.2770617363569897E-4 21 0.0 0.0 0.0 0.002234858038624732 1.9155926045354849E-4 22 0.0 0.0 0.0 0.0028733889068032273 1.9155926045354849E-4 23 0.0 0.0 0.0 0.00376733212225312 2.5541234727139794E-4 24 0.0 0.0 0.0 0.0050443938586101095 2.5541234727139794E-4 25 0.0 0.0 0.0 0.0061937494213314005 3.1926543408924746E-4 26 0.0 0.0 0.0 0.008428607459956133 3.1926543408924746E-4 27 0.0 0.0 0.0 0.02004986926080474 3.1926543408924746E-4 28 0.0 0.0 0.0 0.0568931003547039 3.8311852090709697E-4 29 0.0 0.0 0.0 0.11634032418212177 3.8311852090709697E-4 30 6.385308681784949E-5 0.0 0.0 0.19692291974624784 3.8311852090709697E-4 31 6.385308681784949E-5 0.0 0.0 0.543900593514442 3.8311852090709697E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CTTATAC 1020 0.0 21.764706 37 TACTTAC 555 0.0 17.666666 31 GTACTTA 570 0.0 17.201756 30 TCTTATA 1735 0.0 15.887609 37 CCCTATA 70 0.0025930563 15.857143 2 TCGTTAC 760 0.0 15.578948 23 GTATATG 155 7.214112E-9 15.5161295 1 CTCGTTA 860 0.0 15.273255 22 TGTTATA 110 1.4524576E-5 15.136364 2 CCTATAC 110 1.4524576E-5 15.136364 3 CGTTACG 590 0.0 15.050847 24 TACGGAT 1260 0.0 14.829366 27 ACGATAC 75 0.0041052885 14.8 3 AGTGTAC 765 0.0 14.751634 27 TACATAT 340 0.0 14.691176 35 TCTCGTT 940 0.0 14.56383 21 ACGGATG 1305 0.0 14.45977 28 CTATACT 130 4.446152E-6 14.230769 4 ATAGCAC 105 1.6562354E-4 14.095239 3 TTACATA 355 0.0 14.070422 34 >>END_MODULE