##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2727533.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1209734 Sequences flagged as poor quality 0 Sequence length 43 %GC 53 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.57374844387279 34.0 31.0 34.0 31.0 34.0 2 32.75145445197043 34.0 31.0 34.0 31.0 34.0 3 32.85091267997758 34.0 31.0 34.0 31.0 34.0 4 36.30112900852584 37.0 37.0 37.0 35.0 37.0 5 36.15764787961651 37.0 35.0 37.0 35.0 37.0 6 36.180509103654195 37.0 36.0 37.0 35.0 37.0 7 36.15499440372842 37.0 35.0 37.0 35.0 37.0 8 36.144204428411534 37.0 35.0 37.0 35.0 37.0 9 37.86923488965343 39.0 38.0 39.0 35.0 39.0 10 37.83817847559877 39.0 37.0 39.0 35.0 39.0 11 37.9188656349247 39.0 38.0 39.0 35.0 39.0 12 37.879647922601166 39.0 38.0 39.0 35.0 39.0 13 37.91656016942567 39.0 38.0 39.0 35.0 39.0 14 39.25519990344985 40.0 39.0 41.0 36.0 41.0 15 39.27708074667654 40.0 39.0 41.0 36.0 41.0 16 39.258659341640396 40.0 39.0 41.0 36.0 41.0 17 39.27311375889245 40.0 39.0 41.0 36.0 41.0 18 39.23971798759066 40.0 39.0 41.0 36.0 41.0 19 39.27885303711395 40.0 39.0 41.0 36.0 41.0 20 39.25025501473878 40.0 39.0 41.0 36.0 41.0 21 39.229042913566126 40.0 39.0 41.0 36.0 41.0 22 39.19402199161138 40.0 39.0 41.0 36.0 41.0 23 39.15683613091804 40.0 39.0 41.0 36.0 41.0 24 39.11139721624754 40.0 39.0 41.0 36.0 41.0 25 39.04778323168564 40.0 39.0 41.0 36.0 41.0 26 38.948598617547326 40.0 38.0 41.0 35.0 41.0 27 38.90546682163186 40.0 38.0 41.0 35.0 41.0 28 38.81807240269348 40.0 38.0 41.0 35.0 41.0 29 38.744473578489156 40.0 38.0 41.0 35.0 41.0 30 38.687009706266004 40.0 38.0 41.0 35.0 41.0 31 38.62064801022373 40.0 38.0 41.0 35.0 41.0 32 38.531823524840995 40.0 38.0 41.0 35.0 41.0 33 38.48250855146669 40.0 38.0 41.0 34.0 41.0 34 38.437964048294916 40.0 38.0 41.0 34.0 41.0 35 38.42278219840064 40.0 38.0 41.0 34.0 41.0 36 38.36390727217719 40.0 38.0 41.0 34.0 41.0 37 38.34631993479558 40.0 38.0 41.0 34.0 41.0 38 38.30786354686237 40.0 38.0 41.0 34.0 41.0 39 38.262766029556914 40.0 38.0 41.0 34.0 41.0 40 38.21231030953912 40.0 38.0 41.0 34.0 41.0 41 38.15950365948217 40.0 38.0 41.0 34.0 41.0 42 38.1247059270881 40.0 38.0 41.0 34.0 41.0 43 37.00017689839254 39.0 36.0 40.0 31.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 1.0 9 0.0 10 3.0 11 1.0 12 0.0 13 0.0 14 2.0 15 4.0 16 2.0 17 4.0 18 12.0 19 25.0 20 73.0 21 119.0 22 269.0 23 516.0 24 807.0 25 1372.0 26 2084.0 27 3174.0 28 4552.0 29 6638.0 30 9264.0 31 12880.0 32 17412.0 33 24166.0 34 34954.0 35 50846.0 36 78594.0 37 133819.0 38 314132.0 39 514008.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 44.136810240928995 15.88373973121364 11.478721768587144 28.50072825927022 2 19.27241856474233 19.158426563194883 33.87579418285342 27.693360689209364 3 20.742163153222112 20.719100231951817 28.65580367254289 29.88293294228318 4 16.01608287441702 13.941329250893173 31.996868733126455 38.04571914156335 5 17.09160856849522 34.2889428585127 32.6791674864061 15.940281086585978 6 38.8358928491718 31.261996438886563 14.144266425511724 15.75784428642991 7 31.726148062301302 28.65117455572878 19.60993077817107 20.01274660379885 8 28.93603056539702 33.30881003592525 18.639138852012096 19.11602054666563 9 29.15690556767025 13.21323530627394 16.648949273145995 40.98090985290981 10 17.332239980028668 25.459315849599996 32.075563718966315 25.132880451405022 11 39.06073566585712 19.731031780540185 19.281098158768785 21.927134394833907 12 23.29817959981285 22.555123688348015 28.586366920331248 25.560329791507886 13 33.50703543092944 17.79928480145222 22.04691279239899 26.646766975219343 14 24.161427222844033 18.22483289714929 23.332484661917412 34.28125521808927 15 28.084769048402375 25.12370488057705 20.39035027534979 26.401175795670785 16 26.632052996774497 23.950802407802048 22.748719966538097 26.668424628885358 17 26.566501396174697 23.458793420702403 23.215930113562155 26.75877506956075 18 26.37604630439419 23.883597551197205 23.69372109901846 26.046635045390143 19 27.794291968317005 23.404070646935608 23.333889929521696 25.46774745522569 20 26.846232312227315 22.714084253232528 23.52492366090397 26.914759773636188 21 26.45457596463355 23.762331223227587 23.968409584255713 25.814683227883155 22 27.36692529101439 22.814106241537395 22.770625608604867 27.04834285884335 23 26.587332421838187 23.199728204712773 23.3657151076187 26.847224265830338 24 26.097803318746106 22.904539345013035 23.654208280498025 27.34344905574283 25 26.993289433875546 22.527100999062604 22.95628625797076 27.52332330909109 26 26.49111292234491 23.02497904498014 23.59684029712317 26.887067735551785 27 27.561430860007242 23.2748686901418 22.89660371618885 26.26709673366211 28 26.45457596463355 24.167544270062674 22.281344493913537 27.096535271390238 29 26.563608198165877 23.740177592760062 23.543688116561164 26.1525260925129 30 27.52745644910369 23.050687175858496 22.859736107276476 26.56212026776134 31 26.621802809543254 23.011752996939823 23.66503710733103 26.701407086185892 32 26.171042559769337 23.260154711696952 23.45441229228905 27.114390436244662 33 26.302724400570703 22.778313249028297 23.400433483724523 27.51852886667648 34 26.720171541843087 23.203613356324613 24.237311673475325 25.83890342835698 35 26.69652998097102 22.928346231485598 23.677436527368826 26.69768726017455 36 26.22560000793563 22.656798932657924 24.205238506977565 26.91236255242888 37 25.506268320143104 22.366239189772298 24.902581889903068 27.22491060018153 38 26.121527542418416 21.66368805043092 24.67509386360969 27.539690543540978 39 24.97350657251925 22.028148336741797 26.032665032147563 26.96568005859139 40 26.122188844820432 21.082733890260172 26.230146461949488 26.56493080296991 41 25.18495801556375 21.4832351574809 26.399605202466 26.93220162448935 42 24.339565557386997 21.471331714244617 27.124805949076407 27.064296779291976 43 23.970558817062262 21.096538577902248 26.736621439093224 28.196281165942267 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 5.0 1 8.0 2 11.0 3 34.5 4 58.0 5 58.0 6 81.0 7 104.0 8 97.5 9 91.0 10 127.0 11 163.0 12 163.0 13 266.5 14 370.0 15 483.0 16 596.0 17 598.0 18 600.0 19 600.0 20 802.5 21 1005.0 22 1198.0 23 1391.0 24 1914.5 25 2438.0 26 2438.0 27 3300.5 28 4163.0 29 5392.0 30 6621.0 31 8690.5 32 10760.0 33 10760.0 34 13697.0 35 16634.0 36 20580.5 37 24527.0 38 29710.5 39 34894.0 40 34894.0 41 40911.0 42 46928.0 43 54993.0 44 63058.0 45 73774.5 46 84491.0 47 84491.0 48 96427.5 49 108364.0 50 118988.5 51 129613.0 52 132705.0 53 135797.0 54 135797.0 55 129524.0 56 123251.0 57 114735.5 58 106220.0 59 99689.0 60 93158.0 61 93158.0 62 82729.5 63 72301.0 64 61058.5 65 49816.0 66 41972.0 67 34128.0 68 34128.0 69 28303.0 70 22478.0 71 18520.5 72 14563.0 73 11811.0 74 9059.0 75 9059.0 76 7405.0 77 5751.0 78 4529.0 79 3307.0 80 2513.5 81 1720.0 82 1720.0 83 1227.5 84 735.0 85 552.5 86 370.0 87 250.5 88 131.0 89 131.0 90 89.0 91 47.0 92 29.5 93 12.0 94 7.0 95 2.0 96 2.0 97 1.5 98 1.0 99 1.5 100 2.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 1209734.0 >>END_MODULE >>Sequence Duplication Levels pass #Total Deduplicated Percentage 72.12356168035728 #Duplication Level Percentage of deduplicated Percentage of total 1 86.98368535664223 62.73573196004576 2 7.345662109636257 10.595906284948281 3 2.2838683801279807 4.941621659519342 4 1.0854610876646509 3.131492788312366 5 0.6172165129060053 2.225792661935566 6 0.3908584055314869 1.6914060191781777 7 0.2772033027374776 1.3995022652089655 8 0.19359701059179243 1.117032474763994 9 0.14227294883201222 0.9235108620478754 >10 0.6369719323679448 7.665895601915035 >50 0.028632274703447865 1.4352515038045763 >100 0.013767575984829791 1.740996345327964 >500 8.031022738355386E-4 0.39585957299202706 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 8.266280025195622E-5 2 0.0 0.0 0.0 8.266280025195622E-5 8.266280025195622E-5 3 0.0 0.0 0.0 8.266280025195622E-5 8.266280025195622E-5 4 0.0 0.0 0.0 1.6532560050391243E-4 8.266280025195622E-5 5 0.0 0.0 0.0 1.6532560050391243E-4 8.266280025195622E-5 6 0.0 0.0 0.0 1.6532560050391243E-4 8.266280025195622E-5 7 0.0 0.0 0.0 1.6532560050391243E-4 8.266280025195622E-5 8 0.0 0.0 0.0 1.6532560050391243E-4 8.266280025195622E-5 9 0.0 0.0 0.0 2.4798840075586863E-4 8.266280025195622E-5 10 0.0 0.0 0.0 2.4798840075586863E-4 8.266280025195622E-5 11 0.0 0.0 0.0 2.4798840075586863E-4 8.266280025195622E-5 12 0.0 0.0 0.0 2.4798840075586863E-4 8.266280025195622E-5 13 8.266280025195622E-5 0.0 0.0 3.3065120100782486E-4 8.266280025195622E-5 14 8.266280025195622E-5 0.0 0.0 4.133140012597811E-4 2.4798840075586863E-4 15 8.266280025195622E-5 0.0 0.0 4.133140012597811E-4 2.4798840075586863E-4 16 8.266280025195622E-5 0.0 0.0 5.786396017636935E-4 2.4798840075586863E-4 17 8.266280025195622E-5 0.0 0.0 7.43965202267606E-4 2.4798840075586863E-4 18 8.266280025195622E-5 0.0 0.0 8.266280025195622E-4 3.3065120100782486E-4 19 8.266280025195622E-5 0.0 0.0 9.919536030234745E-4 3.3065120100782486E-4 20 8.266280025195622E-5 0.0 0.0 0.0013226048040312994 3.3065120100782486E-4 21 8.266280025195622E-5 0.0 0.0 0.001901244405794993 3.3065120100782486E-4 22 8.266280025195622E-5 0.0 0.0 0.003471837610582161 3.3065120100782486E-4 23 8.266280025195622E-5 0.0 0.0 0.004463791213605636 3.3065120100782486E-4 24 8.266280025195622E-5 0.0 0.0 0.006199710018896716 3.3065120100782486E-4 25 8.266280025195622E-5 0.0 0.0 0.007935628824187796 3.3065120100782486E-4 26 8.266280025195622E-5 0.0 0.0 0.010663501232502351 3.3065120100782486E-4 27 8.266280025195622E-5 0.0 0.0 0.02314558407054774 3.3065120100782486E-4 28 8.266280025195622E-5 0.0 0.0 0.062327751389974984 3.3065120100782486E-4 29 8.266280025195622E-5 0.0 0.0 0.11886910676231303 3.3065120100782486E-4 30 8.266280025195622E-5 0.0 0.0 0.19830805780444297 3.3065120100782486E-4 31 8.266280025195622E-5 0.0 0.0 0.5018458603296262 3.3065120100782486E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CTAATAC 105 9.822543E-10 21.142859 3 CTTATAC 705 0.0 20.205673 37 CGTCGAA 55 5.143309E-4 20.181818 22 GTATAAT 65 6.902512E-5 19.923077 1 TACTTAC 330 0.0 18.5 31 TAAGGGT 155 2.0008883E-11 17.903225 4 TAATACA 115 6.405753E-8 17.695652 4 TCTTATA 1335 0.0 17.322098 37 TTTATAC 75 2.0673785E-4 17.266668 3 TAGTACT 75 2.0673785E-4 17.266668 4 GATCGAG 90 4.4462668E-5 16.444445 7 CCTAATA 80 3.38275E-4 16.1875 2 GGTACCG 95 7.0601636E-5 15.578948 5 GTACTTA 385 0.0 15.376623 30 TCGTTAT 85 5.364441E-4 15.235294 23 TTATACA 340 0.0 15.235294 37 TATTATA 85 5.364441E-4 15.235294 1 GTGTACT 475 0.0 14.410526 28 TAATACC 90 8.274457E-4 14.388888 4 TAGACAG 155 1.2100645E-7 14.32258 5 >>END_MODULE