##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2727528.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1532697 Sequences flagged as poor quality 0 Sequence length 43 %GC 51 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.8038066232269 31.0 31.0 34.0 30.0 34.0 2 31.999461080696314 33.0 31.0 34.0 30.0 34.0 3 32.095958300955765 33.0 31.0 34.0 30.0 34.0 4 35.79613061159512 37.0 35.0 37.0 35.0 37.0 5 35.35885566423109 37.0 35.0 37.0 33.0 37.0 6 35.33968227249091 37.0 35.0 37.0 32.0 37.0 7 35.311879647445 37.0 35.0 37.0 32.0 37.0 8 35.26416571572855 37.0 35.0 37.0 32.0 37.0 9 36.905261770591316 39.0 37.0 39.0 33.0 39.0 10 36.75449093982699 38.0 37.0 39.0 33.0 39.0 11 36.86829882227211 39.0 37.0 39.0 33.0 39.0 12 36.82254418192245 38.0 37.0 39.0 33.0 39.0 13 36.89611188643287 39.0 37.0 39.0 33.0 39.0 14 38.01292427661827 39.0 37.0 40.0 33.0 41.0 15 37.993726744425025 39.0 37.0 40.0 33.0 41.0 16 37.96202315265183 39.0 37.0 40.0 33.0 41.0 17 37.96664441830316 39.0 37.0 40.0 33.0 41.0 18 37.92416178801159 39.0 37.0 40.0 33.0 41.0 19 37.97837276382742 40.0 37.0 40.0 33.0 41.0 20 37.947846834697266 39.0 37.0 40.0 33.0 41.0 21 37.913377529935794 39.0 37.0 40.0 33.0 41.0 22 37.89775669946506 39.0 37.0 40.0 33.0 41.0 23 37.83357310675235 39.0 37.0 40.0 33.0 41.0 24 37.76785561660263 39.0 37.0 40.0 33.0 41.0 25 37.681820346748246 39.0 37.0 40.0 33.0 41.0 26 37.53081528834466 39.0 37.0 40.0 32.0 41.0 27 37.45236207808849 39.0 37.0 40.0 32.0 41.0 28 37.34857313611236 39.0 36.0 40.0 32.0 41.0 29 37.22374807284153 39.0 36.0 40.0 31.0 41.0 30 37.15026779591791 39.0 36.0 40.0 31.0 41.0 31 37.06660481491123 39.0 36.0 40.0 31.0 41.0 32 36.94040244092603 39.0 36.0 40.0 31.0 41.0 33 36.893952946994744 39.0 36.0 40.0 31.0 41.0 34 36.82827656085971 39.0 36.0 40.0 31.0 41.0 35 36.80820344790914 39.0 36.0 40.0 30.0 41.0 36 36.72841729317667 39.0 36.0 40.0 30.0 41.0 37 36.70478966162262 39.0 35.0 40.0 30.0 41.0 38 36.67381028344154 38.0 35.0 40.0 30.0 41.0 39 36.60289085187744 38.0 35.0 40.0 30.0 41.0 40 36.54769207481974 38.0 35.0 40.0 30.0 41.0 41 36.49572746602884 38.0 35.0 40.0 30.0 41.0 42 36.45319785972048 38.0 35.0 40.0 30.0 41.0 43 35.265600441574556 38.0 34.0 40.0 27.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 3.0 10 6.0 11 1.0 12 3.0 13 1.0 14 1.0 15 5.0 16 13.0 17 32.0 18 57.0 19 141.0 20 271.0 21 540.0 22 944.0 23 1680.0 24 2716.0 25 4411.0 26 6486.0 27 9458.0 28 13644.0 29 18969.0 30 26136.0 31 34363.0 32 46156.0 33 61457.0 34 84791.0 35 121992.0 36 185777.0 37 294655.0 38 418953.0 39 199035.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 42.594394064841254 17.447218856695095 12.527785987706638 27.430601090757012 2 18.57705730486848 20.040882183497455 35.26776655790414 26.114293953729927 3 20.24118269951595 21.7802996939382 29.315383275363622 28.66313433118222 4 15.890290122574783 14.809841736494558 33.0757481746229 36.224119966307754 5 16.306158360067254 35.19580190996655 33.06576577105586 15.43227395891034 6 37.14080473831422 32.91459433925949 14.565174982400306 15.379425940025982 7 30.650480819105148 29.897820639043466 20.169935740723705 19.281762801127687 8 27.80588726930372 34.990151347591855 18.925658496101967 18.278302887002454 9 28.643300012983648 14.254219849063448 17.430646761884443 39.67183337606846 10 16.910713598317216 26.395106142962373 32.337572266403605 24.35660799231681 11 37.92974084244962 20.84632513797574 19.988947587161714 21.23498643241293 12 22.58345909204494 23.29729881379033 29.183067494749455 24.936174599415278 13 32.12924668085081 18.773443152821464 23.019618359010295 26.07769180731743 14 23.524153828186524 19.000624389556446 24.22044278810489 33.25477899415214 15 27.092960970106944 25.96775487914441 21.128703194434387 25.81058095631426 16 25.66671690490684 25.01127098180527 23.572630467731067 25.749381645556817 17 25.51182653844824 24.601274746411065 23.95137460306897 25.93552411207173 18 25.499886800848437 24.92932393030064 24.54901392773653 25.021775341114388 19 26.88704942986122 24.522198451487803 24.142214671262487 24.448537447388492 20 25.782395346242602 23.87210257474243 24.165767924123294 26.17973415489167 21 25.35602274944102 24.806990553253513 24.89317849516245 24.94380820214302 22 26.406001969078037 23.761317468488553 23.455386159169098 26.37729440326431 23 25.499169111703097 24.089888608120198 24.356868970187843 26.054073309988862 24 25.15278623237339 23.761969913166137 24.552667617931007 26.532576236529465 25 25.969451235306128 23.443120199230506 23.94374100034123 26.643687565122132 26 25.492840398330525 23.83641385087855 24.68035104133433 25.9903947094566 27 26.508566272394347 24.260111424502036 23.84561332083249 25.385708982271122 28 25.753883513832154 25.000701378028406 23.146062137526204 26.09935297061324 29 25.579615540449286 24.85559768173357 24.40436694271601 25.160419835101134 30 26.755255604989113 24.11520346161048 23.516324492055507 25.6132164413449 31 25.85566488353536 23.997632930709724 24.435619042772316 25.7110831429826 32 25.36228621834583 24.26539622639047 24.101045412106895 26.271272143156803 33 25.512348494190306 23.73678554861137 24.143650049553173 26.60721590764515 34 25.957576742174087 24.003113466001434 24.930302597317016 25.10900719450746 35 25.764583606544544 23.713036562347288 24.557038997270826 25.965340833837345 36 25.41539521510122 23.488530348790402 25.103657148151264 25.99241728795711 37 24.661756368023163 23.29410183487017 25.716694167209823 26.327447629896845 38 25.513327161206682 22.730259144501492 25.364961241523925 26.3914524527679 39 24.290515346477484 23.119116172341958 26.546147085823225 26.044221395357336 40 25.56284771223536 22.25762822005915 26.568330204861105 25.611193862844384 41 24.49068537356046 22.75700937628246 26.686161713632895 26.066143536524176 42 23.91855663578646 22.873992706973397 27.176669622241057 26.03078103499909 43 23.562321841825227 22.450947578027492 26.77887410231768 27.207856477829605 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 25.0 1 30.5 2 36.0 3 79.0 4 122.0 5 122.0 6 186.0 7 250.0 8 242.0 9 234.0 10 323.0 11 412.0 12 412.0 13 713.0 14 1014.0 15 1520.5 16 2027.0 17 2026.0 18 2025.0 19 2025.0 20 2469.0 21 2913.0 22 3332.5 23 3752.0 24 5005.0 25 6258.0 26 6258.0 27 8001.5 28 9745.0 29 12015.0 30 14285.0 31 18044.0 32 21803.0 33 21803.0 34 26486.0 35 31169.0 36 37158.5 37 43148.0 38 50255.0 39 57362.0 40 57362.0 41 65706.0 42 74050.0 43 83231.5 44 92413.0 45 104761.0 46 117109.0 47 117109.0 48 130075.5 49 143042.0 50 151818.0 51 160594.0 52 162608.5 53 164623.0 54 164623.0 55 154407.0 56 144191.0 57 132262.0 58 120333.0 59 111831.5 60 103330.0 61 103330.0 62 90265.5 63 77201.0 64 64661.5 65 52122.0 66 43322.0 67 34522.0 68 34522.0 69 27984.5 70 21447.0 71 17317.0 72 13187.0 73 10494.5 74 7802.0 75 7802.0 76 6268.5 77 4735.0 78 3755.0 79 2775.0 80 2116.5 81 1458.0 82 1458.0 83 1067.0 84 676.0 85 503.5 86 331.0 87 224.5 88 118.0 89 118.0 90 78.5 91 39.0 92 27.0 93 15.0 94 9.0 95 3.0 96 3.0 97 2.0 98 1.0 99 0.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 1532697.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 67.36657979981487 #Duplication Level Percentage of deduplicated Percentage of total 1 84.41104118331305 56.86483141861118 2 8.499321459821441 11.451404347346804 3 2.7617111372609653 5.581411011369849 4 1.3579895757839788 3.659324524974726 5 0.7749150676979187 2.6101688873075397 6 0.49121088955207054 1.9854718553728568 7 0.3541413493362531 1.6700104029332368 8 0.25597560187202223 1.3795360648253783 9 0.18740577654740617 1.1362397580654402 >10 0.8592130481974771 9.502382059108932 >50 0.02923175255563514 1.3652604775236947 >100 0.01648563025356242 2.0637802520749267 >500 0.0011635952642592444 0.5698113166804191 >1k 1.9393254404320742E-4 0.1603676238049328 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 6.52444677584676E-5 7 0.0 0.0 0.0 0.0 6.52444677584676E-5 8 0.0 0.0 0.0 0.0 6.52444677584676E-5 9 0.0 0.0 0.0 1.304889355169352E-4 6.52444677584676E-5 10 0.0 0.0 0.0 1.304889355169352E-4 6.52444677584676E-5 11 0.0 0.0 0.0 1.9573340327540278E-4 6.52444677584676E-5 12 0.0 0.0 0.0 1.9573340327540278E-4 6.52444677584676E-5 13 0.0 0.0 0.0 2.609778710338704E-4 6.52444677584676E-5 14 0.0 0.0 0.0 3.9146680655080556E-4 6.52444677584676E-5 15 0.0 0.0 0.0 3.9146680655080556E-4 1.9573340327540278E-4 16 0.0 0.0 0.0 3.9146680655080556E-4 2.609778710338704E-4 17 0.0 0.0 0.0 5.872002098262083E-4 2.609778710338704E-4 18 0.0 0.0 0.0 7.829336131016111E-4 3.2622233879233797E-4 19 0.0 0.0 0.0 9.134225486185463E-4 3.2622233879233797E-4 20 0.0 0.0 0.0 0.0011744004196524167 3.9146680655080556E-4 21 0.0 0.0 0.0 0.0015006227584447546 4.5671127430927316E-4 22 0.0 0.0 0.0 0.0019573340327540276 4.5671127430927316E-4 23 0.0 0.0 0.0 0.0023488008393048334 5.219557420677408E-4 24 0.0 0.0 0.0 0.0031317344524064445 5.219557420677408E-4 25 0.0 0.0 0.0 0.0037189346622326525 5.219557420677408E-4 26 0.0 0.0 0.0 0.0058067576305036155 5.872002098262083E-4 27 0.0 0.0 0.0 0.013766582697036662 5.872002098262083E-4 28 0.0 0.0 0.0 0.04332232659162248 5.872002098262083E-4 29 0.0 0.0 0.0 0.09303861102357479 5.872002098262083E-4 30 0.0 0.0 0.0 0.16200201344427503 5.872002098262083E-4 31 0.0 0.0 0.0 0.5049269359827807 5.872002098262083E-4 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TATACCG 60 3.7273305E-5 21.583334 5 CTTATAC 900 0.0 17.883333 37 TACTTAC 445 0.0 17.044943 31 GTACTTA 480 0.0 16.1875 30 ATACCGT 80 3.3834856E-4 16.1875 6 TCTTATA 1545 0.0 15.805826 37 GTACTAG 115 2.2106837E-5 14.478261 1 GTCTTAT 145 8.914758E-7 14.034484 1 CTCGTTA 490 0.0 13.969389 22 GTATTAG 120 3.3017703E-5 13.875001 1 CTATACC 120 3.3017703E-5 13.875001 4 AATAGGT 80 0.006299884 13.875001 7 TTTTACG 80 0.006299884 13.875001 2 CTCTTAT 2420 0.0 13.5309925 37 GTGTACT 615 0.0 13.235772 28 CGTTACA 140 9.563008E-6 13.214285 24 TATAGTA 155 1.8884857E-6 13.129032 5 GTACTAC 100 0.0018329648 12.950001 1 TCTATAC 100 0.0018329648 12.950001 3 AGTGTAC 630 0.0 12.920635 27 >>END_MODULE