##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2727525.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 977721 Sequences flagged as poor quality 0 Sequence length 43 %GC 52 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.44618454548895 33.0 31.0 34.0 31.0 34.0 2 32.622733888297375 34.0 31.0 34.0 31.0 34.0 3 32.71676071190043 34.0 31.0 34.0 31.0 34.0 4 36.2097224054715 37.0 35.0 37.0 35.0 37.0 5 36.05440406823624 37.0 35.0 37.0 35.0 37.0 6 36.08043092047731 37.0 35.0 37.0 35.0 37.0 7 36.051097398951235 37.0 35.0 37.0 35.0 37.0 8 36.035582748043666 37.0 35.0 37.0 35.0 37.0 9 37.73591443775883 39.0 37.0 39.0 35.0 39.0 10 37.69447009934327 39.0 37.0 39.0 35.0 39.0 11 37.7776973185602 39.0 37.0 39.0 35.0 39.0 12 37.74913395539218 39.0 37.0 39.0 35.0 39.0 13 37.78373175987833 39.0 37.0 39.0 35.0 39.0 14 39.08692766136761 40.0 38.0 41.0 36.0 41.0 15 39.0980954689528 40.0 38.0 41.0 36.0 41.0 16 39.065610741714664 40.0 38.0 41.0 36.0 41.0 17 39.08676810664801 40.0 38.0 41.0 36.0 41.0 18 39.056726816750384 40.0 38.0 41.0 36.0 41.0 19 39.10455948066984 40.0 39.0 41.0 36.0 41.0 20 39.081711449380755 40.0 39.0 41.0 36.0 41.0 21 39.05797870762723 40.0 39.0 41.0 36.0 41.0 22 39.0304350627633 40.0 39.0 41.0 36.0 41.0 23 38.981070264421035 40.0 38.0 41.0 36.0 41.0 24 38.94045131484339 40.0 38.0 41.0 35.0 41.0 25 38.880130425755404 40.0 38.0 41.0 35.0 41.0 26 38.770416100298554 40.0 38.0 41.0 35.0 41.0 27 38.714524900252734 40.0 38.0 41.0 35.0 41.0 28 38.63740269463374 40.0 38.0 41.0 35.0 41.0 29 38.539905555879436 40.0 38.0 41.0 34.0 41.0 30 38.48178161254591 40.0 38.0 41.0 34.0 41.0 31 38.409861299900484 40.0 38.0 41.0 34.0 41.0 32 38.32254702517385 40.0 38.0 41.0 34.0 41.0 33 38.278718571044294 40.0 38.0 41.0 34.0 41.0 34 38.22332137695723 40.0 38.0 41.0 34.0 41.0 35 38.219039991981354 40.0 38.0 41.0 34.0 41.0 36 38.14947208866333 40.0 38.0 41.0 34.0 41.0 37 38.14579517060593 40.0 38.0 41.0 34.0 41.0 38 38.11539999652253 40.0 38.0 41.0 33.0 41.0 39 38.067631768162904 40.0 38.0 41.0 33.0 41.0 40 38.00577772186544 40.0 38.0 41.0 33.0 41.0 41 37.95455963408784 40.0 37.0 41.0 33.0 41.0 42 37.91279209508643 40.0 37.0 41.0 33.0 41.0 43 36.768821575889234 39.0 35.0 40.0 31.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 1.0 10 2.0 11 2.0 12 0.0 13 0.0 14 0.0 15 1.0 16 5.0 17 5.0 18 11.0 19 18.0 20 57.0 21 111.0 22 236.0 23 457.0 24 743.0 25 1228.0 26 1940.0 27 3087.0 28 4429.0 29 6153.0 30 8813.0 31 12164.0 32 16386.0 33 22069.0 34 31363.0 35 45529.0 36 68438.0 37 116350.0 38 268373.0 39 369750.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.58073519950988 16.405088977325843 12.396481204760867 27.61769461840341 2 18.353497572415854 19.629321657200776 35.297083728384685 26.720097041998685 3 20.595650497432295 21.350671612862975 29.13131660258908 28.92236128711565 4 16.052841250213508 14.207222714864464 32.097091092448665 37.64284494247336 5 17.03880759439554 34.45471663184078 32.395437962363495 16.111037811400184 6 38.11762251194359 31.654326745564433 14.120388127083288 16.107662615408692 7 30.831085759639 29.593207060091785 19.852084592639414 19.723622587629805 8 28.23085522352491 34.40460008530041 18.95745309756055 18.40709159361413 9 29.021367036199486 14.142275761694798 16.962814545253707 39.87354265685201 10 17.42204575742978 25.807975894963903 31.83863290243331 24.931345445173008 11 38.01104814154549 20.625822704022927 19.25201565681825 22.111113497613328 12 23.012597663341587 23.042565312599404 28.486449610880815 25.458387413178198 13 33.19515485501488 18.149144796930823 22.50345446195796 26.152245886096342 14 24.041930162081 18.953361950904192 23.913468157071392 33.09123972994341 15 28.397876285770685 25.130482008671184 20.860552243431407 25.611089462126724 16 26.192748237994273 24.16599418443503 23.600290880527268 26.040966697043434 17 26.033909469061218 24.241373561578406 23.683647993650542 26.04106897570984 18 25.94298373462368 24.18767726171372 24.658261405861182 25.211077597801417 19 27.254093959319682 24.469352709003896 23.742253669502855 24.534299662173563 20 25.971008089219726 23.2946822252974 24.001836924848703 26.732472760634167 21 25.462274002501733 25.04528387955255 24.34845932530855 25.143982792637164 22 26.714369436679792 23.59977948719522 22.69195404414961 26.99389703197538 23 25.96937163055718 23.551810792649437 23.74839038948739 26.730427187305988 24 25.299446365578724 23.473158498180975 24.063817796692515 27.163577339547786 25 26.48056040526899 22.821438835823308 23.183198478911674 27.514802279996033 26 25.936949293305556 23.19567647621356 24.411667541149264 26.45570668933162 27 27.106301286358786 23.80556416400998 23.590983521884056 25.49715102774718 28 26.213817643274513 24.739879781655503 22.550809484505294 26.495493090564693 29 25.758677577754803 24.341095261327105 24.434475683758457 25.465751477159635 30 27.05823031314659 23.508137802092826 23.53800317268423 25.895628712076352 31 26.05242190768123 23.39757456370478 24.127537405865272 26.422466122748716 32 25.49060519309701 23.664726440364888 23.840134353256197 27.004534013281905 33 26.027670470410268 23.244770236089845 23.66493099769771 27.062628295802178 34 26.436171464047515 23.720468313557753 24.575211128737134 25.2681490936576 35 26.091799194248665 23.402279382359588 24.324832953368087 26.181088470023656 36 25.500117109073038 23.147605503001365 24.814134093468383 26.53814329445721 37 24.382211285223494 22.745854901347112 25.790588521674383 27.08134529175501 38 25.713572685868463 21.96025246466016 25.280524812293077 27.04565003717829 39 24.22286112295839 22.31720501042731 26.655968318160294 26.803965548454006 40 25.79406599633229 21.28153123437054 27.11929067699272 25.805112092304448 41 24.706434657739784 21.853678094262065 26.901846232207347 26.538041015790803 42 23.773755498756802 21.776559979789738 28.03601436401591 26.41367015743755 43 23.35584486780994 21.348626039534796 27.46550396278693 27.830025129868336 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 8.0 1 16.0 2 24.0 3 60.5 4 97.0 5 97.0 6 114.5 7 132.0 8 141.0 9 150.0 10 192.5 11 235.0 12 235.0 13 458.0 14 681.0 15 1081.0 16 1481.0 17 1385.0 18 1289.0 19 1289.0 20 1528.5 21 1768.0 22 1805.5 23 1843.0 24 2385.0 25 2927.0 26 2927.0 27 3701.5 28 4476.0 29 5598.0 30 6720.0 31 8717.5 32 10715.0 33 10715.0 34 13475.0 35 16235.0 36 19191.0 37 22147.0 38 26502.5 39 30858.0 40 30858.0 41 35756.0 42 40654.0 43 46774.0 44 52894.0 45 61474.5 46 70055.0 47 70055.0 48 80792.5 49 91530.0 50 100102.5 51 108675.0 52 113910.5 53 119146.0 54 119146.0 55 108779.0 56 98412.0 57 88465.0 58 78518.0 59 73738.5 60 68959.0 61 68959.0 62 60368.0 63 51777.0 64 43356.0 65 34935.0 66 29126.0 67 23317.0 68 23317.0 69 19053.5 70 14790.0 71 12007.5 72 9225.0 73 7427.5 74 5630.0 75 5630.0 76 4562.0 77 3494.0 78 2761.0 79 2028.0 80 1532.0 81 1036.0 82 1036.0 83 778.5 84 521.0 85 372.5 86 224.0 87 150.5 88 77.0 89 77.0 90 49.5 91 22.0 92 16.5 93 11.0 94 8.0 95 5.0 96 5.0 97 2.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 977721.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 68.27816701578166 #Duplication Level Percentage of deduplicated Percentage of total 1 85.45793485763672 58.34911149033509 2 8.148534169461469 11.127339539125877 3 2.610824247241294 5.347868820059806 4 1.2381088989168023 3.3814322473586786 5 0.7099606204163045 2.4237404907706206 6 0.44479312139960164 1.8221795418235713 7 0.294638644696143 1.4082170614306762 8 0.20990361272637043 1.1465467141557657 9 0.16236262702522963 0.9977240308634724 >10 0.6683138634045879 7.574885641349968 >50 0.028968912201186258 1.3766664299381426 >100 0.022955749095303325 3.1760371102914657 >500 0.0019504880625663178 0.9346888771125375 >1k 7.501877163716607E-4 0.9335620053843221 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTACGGAAGCAGTGGTATCAACGCAGAGTACGGAAGCAGTGGT 2562 0.2620379433396644 No Hit CTTCCGTACTCTGCGTTGATACCACTGCTTCCGTACTCTGCGT 1734 0.17735120755307496 No Hit GAGTACGGAAGCAGTGGTATCAACGCAGAGTACGGAAGCAGTG 1697 0.17356689689594476 No Hit GTACGGGAAGCAGTGGTATCAACGCAGAGTACGGGAAGCAGTG 1630 0.1667142262465468 No Hit TCCGTACTCTGCGTTGATACCACTGCTTCCGTACTCTGCGTTG 1490 0.1523952129492974 No Hit TTCCCGTACTCTGCGTTGATACCACTGCTTCCCGTACTCTGCG 983 0.10053992907997271 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 2.0455733281784884E-4 2 0.0 0.0 0.0 0.0 2.0455733281784884E-4 3 0.0 0.0 0.0 0.0 2.0455733281784884E-4 4 0.0 0.0 0.0 1.0227866640892442E-4 2.0455733281784884E-4 5 0.0 0.0 0.0 1.0227866640892442E-4 2.0455733281784884E-4 6 0.0 0.0 0.0 1.0227866640892442E-4 2.0455733281784884E-4 7 0.0 0.0 0.0 1.0227866640892442E-4 2.0455733281784884E-4 8 0.0 0.0 0.0 1.0227866640892442E-4 2.0455733281784884E-4 9 0.0 0.0 0.0 3.068359992267733E-4 2.0455733281784884E-4 10 0.0 0.0 0.0 3.068359992267733E-4 2.0455733281784884E-4 11 0.0 0.0 0.0 3.068359992267733E-4 2.0455733281784884E-4 12 0.0 0.0 0.0 3.068359992267733E-4 2.0455733281784884E-4 13 0.0 0.0 0.0 3.068359992267733E-4 2.0455733281784884E-4 14 0.0 0.0 0.0 3.068359992267733E-4 2.0455733281784884E-4 15 0.0 0.0 0.0 5.113933320446221E-4 3.068359992267733E-4 16 0.0 0.0 0.0 7.15950664862471E-4 3.068359992267733E-4 17 0.0 0.0 0.0 7.15950664862471E-4 3.068359992267733E-4 18 0.0 0.0 0.0 8.182293312713954E-4 4.091146656356977E-4 19 0.0 0.0 0.0 9.205079976803199E-4 4.091146656356977E-4 20 0.0 0.0 0.0 0.0012273439969070932 4.091146656356977E-4 21 0.0 0.0 0.0 0.0018410159953606397 4.091146656356977E-4 22 0.0 0.0 0.0 0.002863802659449884 4.091146656356977E-4 23 0.0 0.0 0.0 0.004602539988401599 6.136719984535466E-4 24 0.0 0.0 0.0 0.007670899980669332 6.136719984535466E-4 25 1.0227866640892442E-4 0.0 0.0 0.009409637309621048 7.15950664862471E-4 26 1.0227866640892442E-4 0.0 0.0 0.013807619965204798 7.15950664862471E-4 27 1.0227866640892442E-4 0.0 0.0 0.025978781267866805 7.15950664862471E-4 28 1.0227866640892442E-4 0.0 0.0 0.07384519714724344 7.15950664862471E-4 29 1.0227866640892442E-4 0.0 0.0 0.14595165696553516 7.15950664862471E-4 30 1.0227866640892442E-4 0.0 0.0 0.2466961433783257 7.15950664862471E-4 31 1.0227866640892442E-4 0.0 0.0 0.6545834650171163 7.15950664862471E-4 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TAACACG 50 2.7017025E-4 22.2 4 GTACTTA 270 0.0 21.240742 30 TACTTAC 255 0.0 21.039215 31 CTTATAC 630 0.0 20.555555 37 CATATAA 100 1.2891178E-8 20.35 37 GGACCGC 110 1.7535058E-9 20.181818 6 CAATACT 110 1.7535058E-9 20.181818 4 CATATAC 85 1.24492E-6 19.588234 3 TAGGACC 105 2.2584572E-8 19.38095 4 AGTGTAC 350 0.0 19.02857 27 TTAGGAC 50 0.007034149 18.5 3 GTATAGA 60 9.235469E-4 18.5 1 ACTTACA 255 0.0 17.411764 32 AGTACCG 75 2.0668677E-4 17.266666 5 ACATATA 110 7.804665E-7 16.818182 36 TCTTATA 1255 0.0 16.804781 37 GCTTATA 145 2.9776857E-9 16.586208 1 GTCCTAT 80 3.3819198E-4 16.1875 1 GAATAGA 80 3.3819198E-4 16.1875 1 GACCGCG 115 1.2416531E-6 16.086956 7 >>END_MODULE