##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2727524.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2415388 Sequences flagged as poor quality 0 Sequence length 43 %GC 52 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.61296280349161 34.0 31.0 34.0 31.0 34.0 2 32.782912724580896 34.0 31.0 34.0 31.0 34.0 3 32.878984660021494 34.0 31.0 34.0 31.0 34.0 4 36.32985880529339 37.0 37.0 37.0 35.0 37.0 5 36.19388189392346 37.0 35.0 37.0 35.0 37.0 6 36.209226012549536 37.0 36.0 37.0 35.0 37.0 7 36.18825422665013 37.0 36.0 37.0 35.0 37.0 8 36.173483100851705 37.0 36.0 37.0 35.0 37.0 9 37.89732415661583 39.0 38.0 39.0 35.0 39.0 10 37.874238010621895 39.0 38.0 39.0 35.0 39.0 11 37.950214209890916 39.0 38.0 39.0 35.0 39.0 12 37.91771591148089 39.0 38.0 39.0 35.0 39.0 13 37.94869561329277 39.0 38.0 39.0 35.0 39.0 14 39.31242392526584 40.0 39.0 41.0 36.0 41.0 15 39.33085367651077 40.0 39.0 41.0 36.0 41.0 16 39.31930936147733 40.0 39.0 41.0 36.0 41.0 17 39.328621322951015 40.0 39.0 41.0 36.0 41.0 18 39.30064196725329 40.0 39.0 41.0 36.0 41.0 19 39.334167843841236 40.0 39.0 41.0 36.0 41.0 20 39.30683931525701 40.0 39.0 41.0 36.0 41.0 21 39.287027177414146 40.0 39.0 41.0 36.0 41.0 22 39.25384368888145 40.0 39.0 41.0 36.0 41.0 23 39.214181324077124 40.0 39.0 41.0 36.0 41.0 24 39.1705663851936 40.0 39.0 41.0 36.0 41.0 25 39.109599368714264 40.0 39.0 41.0 36.0 41.0 26 39.015815678474844 40.0 39.0 41.0 36.0 41.0 27 38.97228022992579 40.0 39.0 41.0 36.0 41.0 28 38.91362629937716 40.0 38.0 41.0 35.0 41.0 29 38.83919395144797 40.0 38.0 41.0 35.0 41.0 30 38.778265024087226 40.0 38.0 41.0 35.0 41.0 31 38.71535215046195 40.0 38.0 41.0 35.0 41.0 32 38.633860067202455 40.0 38.0 41.0 35.0 41.0 33 38.58714127916509 40.0 38.0 41.0 35.0 41.0 34 38.54448933256272 40.0 38.0 41.0 35.0 41.0 35 38.53179282169159 40.0 38.0 41.0 35.0 41.0 36 38.482817667389256 40.0 38.0 41.0 34.0 41.0 37 38.461962632918606 40.0 38.0 41.0 34.0 41.0 38 38.413457382416404 40.0 38.0 41.0 34.0 41.0 39 38.374576258555564 40.0 38.0 41.0 34.0 41.0 40 38.31661786843356 40.0 38.0 41.0 34.0 41.0 41 38.276347319768085 40.0 38.0 41.0 34.0 41.0 42 38.23448655040101 40.0 38.0 41.0 34.0 41.0 43 37.12784281448778 39.0 36.0 40.0 31.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 1.0 9 0.0 10 5.0 11 2.0 12 0.0 13 0.0 14 0.0 15 2.0 16 9.0 17 7.0 18 31.0 19 54.0 20 113.0 21 227.0 22 508.0 23 929.0 24 1490.0 25 2372.0 26 3748.0 27 5804.0 28 8416.0 29 12196.0 30 17404.0 31 24273.0 32 33365.0 33 45876.0 34 66342.0 35 97652.0 36 150866.0 37 260731.0 38 610495.0 39 1072470.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.684120315245416 16.640018084051093 11.670547340634299 28.00531426006919 2 19.011562531568426 19.188511328200686 34.4728465985589 27.327079541671978 3 20.402187971456346 20.92144202090927 28.59370834002653 30.08266166760785 4 15.609748827103553 14.285986350847152 32.55137476877421 37.552890053275085 5 16.602963995846633 34.34417161963212 33.069055572024034 15.983808812497205 6 37.91175579244411 32.18857591409744 14.472250421050365 15.427417872408078 7 31.273029426328193 28.58083256189068 20.139414454323695 20.006723557457434 8 27.964616864868084 33.497226946560964 18.924454373376037 19.613701815194908 9 28.087412871141197 13.777248210225437 17.549188784576224 40.586150134057135 10 17.249485382886725 25.500582101095144 32.45325388716016 24.796678628857972 11 38.247271245861945 20.10960557889664 20.21811816569429 21.42500500954712 12 22.90360803316072 22.99634675671155 28.924918066993794 25.175127143133942 13 32.321846427985896 18.50944858548606 22.652965072278242 26.515739914249803 14 23.79601124125813 18.74071577734095 23.572320471907616 33.8909525094933 15 26.69575240085651 25.902960518144496 20.80961733684195 26.59166974415705 16 26.32500451273253 24.46919501131909 22.793025385569525 26.412775090378855 17 25.79742881888955 24.34627480139837 23.745460356679754 26.110836023032324 18 25.952807582053072 24.167338746404305 24.125068105000107 25.75478556654252 19 26.943207468116924 23.850122630401412 23.893179894907153 25.31349000657451 20 26.339412135855607 23.611858633064337 23.88605888577736 26.1626703453027 21 26.01942213838936 23.981364484712188 24.183029807219377 25.816183569679076 22 26.710408431274807 23.447537207272703 23.431266529435437 26.410787832017053 23 26.15335507173175 23.65309424407176 23.773902991983068 26.419647692213427 24 25.959473177808285 23.653218447719375 23.807189569543276 26.580118804929064 25 26.464361005354004 23.280234893938363 23.684931779076486 26.57047232163114 26 26.055151387685953 23.662575122506198 23.979874040940835 26.302399448867014 27 26.447096698335837 23.954370891964356 23.457183690570623 26.14134871912918 28 26.16089009302025 24.15450436948432 23.255642571711046 26.42896296578438 29 26.09382012330938 24.195698579275877 23.840062134944777 25.870419162469965 30 26.55850737024445 23.808680013314632 23.476352453518857 26.156460162922063 31 26.19123718425363 23.61566754492446 23.901046125922626 26.292049144899288 32 25.716448040646057 23.914170311353704 23.876371001263568 26.493010646736675 33 25.776852414601713 23.608836344305757 23.91619897093138 26.69811227016115 34 26.252221175231472 23.50479508882217 24.374386226974714 25.868597508971643 35 26.086864719043067 23.40269969048451 24.179717709949706 26.330717880522712 36 25.741330171384476 23.160585380071442 24.58942414220821 26.508660306335873 37 25.403454848661994 22.761187850564795 25.05001266877206 26.785344632001152 38 25.464066228697003 22.596700819909678 25.15902207016016 26.780210881233156 39 24.909828151833164 22.633092488660207 26.018304305560847 26.438775053945783 40 25.465059857877907 22.07579072182192 26.190326357504468 26.26882306279571 41 24.732672349121547 22.299605694820045 26.403666822887256 26.56405513317115 42 24.208905567138693 22.477009904826886 26.697201443411988 26.61688308462243 43 23.881794560542655 22.062252524232132 26.692812914529675 27.36314000069554 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 33.0 1 46.0 2 59.0 3 119.5 4 180.0 5 180.0 6 202.5 7 225.0 8 223.5 9 222.0 10 317.0 11 412.0 12 412.0 13 686.5 14 961.0 15 1342.5 16 1724.0 17 1803.0 18 1882.0 19 1882.0 20 2478.5 21 3075.0 22 3828.5 23 4582.0 24 6234.5 25 7887.0 26 7887.0 27 10439.0 28 12991.0 29 16245.5 30 19500.0 31 24507.0 32 29514.0 33 29514.0 34 36880.5 35 44247.0 36 53317.0 37 62387.0 38 74349.5 39 86312.0 40 86312.0 41 99413.5 42 112515.0 43 128085.5 44 143656.0 45 161300.0 46 178944.0 47 178944.0 48 196006.5 49 213069.0 50 225672.0 51 238275.0 52 239984.5 53 241694.0 54 241694.0 55 234658.0 56 227622.0 57 215499.0 58 203376.0 59 189354.5 60 175333.0 61 175333.0 62 155462.5 63 135592.0 64 115672.0 65 95752.0 66 80546.5 67 65341.0 68 65341.0 69 53728.5 70 42116.0 71 34503.0 72 26890.0 73 21763.5 74 16637.0 75 16637.0 76 13445.0 77 10253.0 78 8198.5 79 6144.0 80 4769.0 81 3394.0 82 3394.0 83 2432.0 84 1470.0 85 1097.0 86 724.0 87 500.0 88 276.0 89 276.0 90 177.5 91 79.0 92 53.5 93 28.0 94 19.0 95 10.0 96 10.0 97 7.0 98 4.0 99 2.5 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 2415388.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 64.84140926039203 #Duplication Level Percentage of deduplicated Percentage of total 1 82.4009606445396 53.42994412602049 2 9.460329096510458 12.26842141369659 3 3.1261751140927796 6.081167999776279 4 1.4809752522412427 3.8411408974034695 5 0.906081927172605 2.937581453162181 6 0.556136810118068 2.163641670578075 7 0.4088663076493989 1.8558027310956022 8 0.28535805659823654 1.4802414826909094 9 0.20762521690036922 1.2116440495633056 >10 1.1261450569249143 12.389790005276396 >50 0.03346392451555221 1.4589860650867432 >100 0.007627101894342283 0.7820741241337753 >500 2.554908424188908E-4 0.09956398151613627 >1k 0.0 0.0 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 4.1401215870907696E-5 2 0.0 0.0 0.0 0.0 4.1401215870907696E-5 3 0.0 0.0 0.0 0.0 4.1401215870907696E-5 4 0.0 0.0 0.0 0.0 4.1401215870907696E-5 5 0.0 0.0 0.0 0.0 4.1401215870907696E-5 6 0.0 0.0 0.0 0.0 8.280243174181539E-5 7 4.1401215870907696E-5 0.0 0.0 0.0 8.280243174181539E-5 8 4.1401215870907696E-5 0.0 0.0 0.0 8.280243174181539E-5 9 4.1401215870907696E-5 0.0 0.0 0.0 2.070060793545385E-4 10 4.1401215870907696E-5 0.0 0.0 0.0 2.070060793545385E-4 11 4.1401215870907696E-5 0.0 0.0 0.0 2.070060793545385E-4 12 4.1401215870907696E-5 0.0 0.0 0.0 2.070060793545385E-4 13 4.1401215870907696E-5 0.0 0.0 0.0 2.070060793545385E-4 14 4.1401215870907696E-5 4.1401215870907696E-5 0.0 0.0 2.070060793545385E-4 15 4.1401215870907696E-5 4.1401215870907696E-5 0.0 8.280243174181539E-5 3.3120972696726157E-4 16 4.1401215870907696E-5 4.1401215870907696E-5 0.0 8.280243174181539E-5 4.5541337457998465E-4 17 4.1401215870907696E-5 4.1401215870907696E-5 0.0 8.280243174181539E-5 4.5541337457998465E-4 18 4.1401215870907696E-5 4.1401215870907696E-5 0.0 2.070060793545385E-4 4.5541337457998465E-4 19 4.1401215870907696E-5 4.1401215870907696E-5 0.0 2.898085110963539E-4 4.5541337457998465E-4 20 4.1401215870907696E-5 4.1401215870907696E-5 0.0 2.898085110963539E-4 4.5541337457998465E-4 21 4.1401215870907696E-5 4.1401215870907696E-5 0.0 4.968145904508923E-4 5.382158063218001E-4 22 4.1401215870907696E-5 4.1401215870907696E-5 0.0 7.452218856763386E-4 5.382158063218001E-4 23 4.1401215870907696E-5 4.1401215870907696E-5 0.0 0.0010350303967726923 6.624194539345231E-4 24 4.1401215870907696E-5 4.1401215870907696E-5 0.0 0.001366240123739954 7.038206698054308E-4 25 4.1401215870907696E-5 4.1401215870907696E-5 0.0 0.002194264441158108 7.038206698054308E-4 26 4.1401215870907696E-5 4.1401215870907696E-5 0.0 0.003974516723607139 7.038206698054308E-4 27 4.1401215870907696E-5 4.1401215870907696E-5 0.0 0.014117814611979525 7.038206698054308E-4 28 4.1401215870907696E-5 4.1401215870907696E-5 0.0 0.048273817705478374 7.038206698054308E-4 29 4.1401215870907696E-5 4.1401215870907696E-5 0.0 0.0984106901251476 7.038206698054308E-4 30 4.1401215870907696E-5 4.1401215870907696E-5 0.0 0.16552206105188896 7.038206698054308E-4 31 4.1401215870907696E-5 4.1401215870907696E-5 0.0 0.4388114870157507 7.038206698054308E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CTTATAC 1260 0.0 20.702381 37 TCTTATA 2420 0.0 17.506199 37 CGACTTA 120 1.9375511E-6 15.416667 19 GCTTATA 175 2.242814E-9 14.799999 1 GTATAAT 180 3.3360266E-9 14.388888 1 CTCGTTA 490 0.0 13.969387 22 GGTATCA 1300 0.0 13.946154 1 GGATACG 135 6.5736695E-6 13.703704 1 GTCTTAG 375 0.0 13.32 1 TCGTTAC 465 0.0 13.129032 23 CGTTACG 370 0.0 13.0 24 CGGTAAA 100 0.0018334959 12.950001 34 CTAGCGT 100 0.0018334959 12.950001 4 TAGACTG 365 0.0 12.671233 5 TTATAAC 205 2.0683729E-8 12.634147 3 CTCTTAT 3705 0.0 12.433198 37 TTTAGAC 275 6.184564E-11 12.109092 3 GTATATG 200 2.042434E-7 12.025001 1 GTCCTAT 185 1.0405547E-6 12.0 1 TATATGA 155 2.7225933E-5 11.935483 2 >>END_MODULE