##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2727519.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1523959 Sequences flagged as poor quality 0 Sequence length 43 %GC 52 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.40012821867255 33.0 31.0 34.0 31.0 34.0 2 32.58483725612041 34.0 31.0 34.0 31.0 34.0 3 32.67354633556415 34.0 31.0 34.0 31.0 34.0 4 36.182621710951544 37.0 35.0 37.0 35.0 37.0 5 36.011190589773086 37.0 35.0 37.0 35.0 37.0 6 36.022977652285924 37.0 35.0 37.0 35.0 37.0 7 36.0039036483265 37.0 35.0 37.0 35.0 37.0 8 35.98840388750616 37.0 35.0 37.0 35.0 37.0 9 37.680259114582476 39.0 37.0 39.0 35.0 39.0 10 37.63478282552221 39.0 37.0 39.0 35.0 39.0 11 37.7112940702473 39.0 37.0 39.0 35.0 39.0 12 37.687609706035396 39.0 37.0 39.0 35.0 39.0 13 37.72329636164753 39.0 37.0 39.0 35.0 39.0 14 39.02464830090573 40.0 38.0 41.0 36.0 41.0 15 39.029639248824935 40.0 38.0 41.0 36.0 41.0 16 39.000072836605185 40.0 38.0 41.0 36.0 41.0 17 39.026720535132505 40.0 38.0 41.0 36.0 41.0 18 38.987459636381296 40.0 38.0 41.0 36.0 41.0 19 39.03923071421213 40.0 39.0 41.0 36.0 41.0 20 39.00940904578142 40.0 38.0 41.0 36.0 41.0 21 38.98911125561777 40.0 38.0 41.0 36.0 41.0 22 38.96779244061028 40.0 38.0 41.0 36.0 41.0 23 38.919306228054694 40.0 38.0 41.0 35.0 41.0 24 38.87891209671651 40.0 38.0 41.0 35.0 41.0 25 38.806717241080634 40.0 38.0 41.0 35.0 41.0 26 38.69209342246084 40.0 38.0 41.0 35.0 41.0 27 38.64479818682786 40.0 38.0 41.0 35.0 41.0 28 38.55892382931562 40.0 38.0 41.0 35.0 41.0 29 38.48027276324363 40.0 38.0 41.0 34.0 41.0 30 38.430007631438905 40.0 38.0 41.0 34.0 41.0 31 38.3483039898055 40.0 38.0 41.0 34.0 41.0 32 38.26312846999165 40.0 38.0 41.0 34.0 41.0 33 38.22126841995093 40.0 38.0 41.0 34.0 41.0 34 38.17342198838683 40.0 38.0 41.0 34.0 41.0 35 38.1732303821822 40.0 38.0 41.0 34.0 41.0 36 38.09739304010147 40.0 38.0 41.0 34.0 41.0 37 38.09186795707758 40.0 38.0 41.0 34.0 41.0 38 38.06706545254826 40.0 38.0 41.0 33.0 41.0 39 38.005450277861804 40.0 38.0 41.0 33.0 41.0 40 37.965039085697185 40.0 37.0 41.0 33.0 41.0 41 37.911262048388444 40.0 37.0 41.0 33.0 41.0 42 37.87909976580735 40.0 37.0 41.0 33.0 41.0 43 36.78103610398968 39.0 35.0 40.0 31.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 1.0 10 0.0 11 0.0 12 0.0 13 0.0 14 1.0 15 2.0 16 5.0 17 4.0 18 17.0 19 43.0 20 91.0 21 233.0 22 389.0 23 721.0 24 1291.0 25 2060.0 26 3247.0 27 4920.0 28 7071.0 29 10135.0 30 14179.0 31 19727.0 32 26460.0 33 35741.0 34 50749.0 35 72226.0 36 109220.0 37 184793.0 38 430703.0 39 549930.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.302608534744046 16.41041524082997 12.194685027615572 28.092291196810415 2 19.011075757287433 19.738654386371287 34.98348708856341 26.266782767777876 3 20.49425214195395 21.19335231459639 29.645941918384942 28.666453625064715 4 16.367763174731078 14.469549377640737 32.225932587425255 36.93675486020293 5 16.624331756956717 35.1561951469823 32.49142529425004 15.728047801810941 6 37.644451064628385 31.700459133086913 14.5464543337452 16.108635468539507 7 30.352063277292896 30.223057181984554 19.88609929794699 19.538780242775562 8 28.092094341120728 34.240488097120725 19.15537097782814 18.51204658393041 9 29.65388176453566 13.683176515903641 17.158073150261917 39.50486856929878 10 17.182811348599273 26.117631773558216 32.32396672088947 24.37559015695304 11 38.07084048849083 20.509278792933404 19.621197158191265 21.7986835603845 12 22.504279970786616 22.980473884139926 28.553983407690104 25.961262737383358 13 32.45382585751979 18.687904333384296 22.523112498433356 26.335157310662556 14 23.648995806317625 19.450063945289866 23.748407929609655 33.15253231878286 15 28.049639130711522 25.92307273358404 20.744586960672827 25.28270117503161 16 25.435854901608245 25.088929557816186 23.744930145758513 25.730285394817052 17 25.861128809895806 23.90011804779525 23.465526303529163 26.773226838779784 18 25.252844728762387 25.353175511939625 24.297569685273686 25.0964100740243 19 27.545754183675548 24.301966129010033 24.03378306109285 24.11849662622157 20 25.814605248566398 23.353843508913297 23.88673186089652 26.944819381623788 21 25.37161432820699 24.85224340024896 25.441366860919484 24.334775410624566 22 26.944031958865033 23.002390484258434 22.984345379370442 27.069232177506088 23 25.572013420308554 24.03942625753055 24.612670025899646 25.77589029626125 24 24.88629943456484 23.354762168798505 24.805194890413716 26.95374350622294 25 26.066843005618917 22.822333146757888 23.80477427542342 27.306049572199775 26 25.419319023674518 23.672093540574256 24.841088244500014 26.06749919125121 27 27.096267025556465 24.073154199030288 23.592760697630315 25.23781807778293 28 25.24575792393365 25.565320326859187 22.400077692378865 26.7888440568283 29 25.691636061075133 25.142999253916937 24.21823684232975 24.94712784267818 30 27.73788533681024 23.450565271112936 22.941627694708323 25.869921697368497 31 26.04505764262687 24.044347649772728 24.436156090813466 25.474438616786934 32 25.62063677566129 24.057208888165626 23.896246552564733 26.42590778360835 33 25.455343614887276 23.215322721936747 24.08706533443485 27.242268328741126 34 26.258711684500696 23.755822827254537 25.230468798701278 24.754996689543486 35 26.109757545970723 23.10016214346974 24.259576537164058 26.53050377339548 36 25.333489942970903 23.03782450840213 25.467679904774343 26.161005643852626 37 24.394553921726242 23.160924933019853 26.348674734687744 26.095846410566164 38 26.022288001186382 21.821256346135296 25.462364801152788 26.69409085152553 39 23.808580152090705 22.949305066606122 27.21772698609346 26.024387795209712 40 26.13187100177892 21.427479348197686 26.743632866763477 25.69701678325992 41 24.390748045058956 22.626330498392676 26.77526101423988 26.207660442308487 42 23.995199345914163 22.702513650301615 27.382495198361635 25.919791805422587 43 23.272870201888633 22.238787263961825 26.414424535043267 28.073917999106275 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 35.0 1 62.5 2 90.0 3 149.5 4 209.0 5 209.0 6 260.5 7 312.0 8 303.5 9 295.0 10 404.5 11 514.0 12 514.0 13 815.0 14 1116.0 15 1544.5 16 1973.0 17 1879.5 18 1786.0 19 1786.0 20 2196.5 21 2607.0 22 2939.5 23 3272.0 24 4279.5 25 5287.0 26 5287.0 27 6843.0 28 8399.0 29 10264.0 30 12129.0 31 15388.5 32 18648.0 33 18648.0 34 22840.0 35 27032.0 36 32146.0 37 37260.0 38 44023.5 39 50787.0 40 50787.0 41 58456.0 42 66125.0 43 75834.5 44 85544.0 45 100206.5 46 114869.0 47 114869.0 48 131352.0 49 147835.0 50 160802.5 51 173770.0 52 174098.0 53 174426.0 54 174426.0 55 160502.0 56 146578.0 57 133573.0 58 120568.0 59 112430.5 60 104293.0 61 104293.0 62 90818.0 63 77343.0 64 64363.0 65 51383.0 66 42796.5 67 34210.0 68 34210.0 69 27917.5 70 21625.0 71 17645.5 72 13666.0 73 11084.5 74 8503.0 75 8503.0 76 6930.0 77 5357.0 78 4260.5 79 3164.0 80 2416.5 81 1669.0 82 1669.0 83 1197.5 84 726.0 85 546.0 86 366.0 87 244.0 88 122.0 89 122.0 90 83.5 91 45.0 92 29.0 93 13.0 94 8.5 95 4.0 96 4.0 97 4.0 98 4.0 99 2.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 1523959.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 64.92027151352127 #Duplication Level Percentage of deduplicated Percentage of total 1 84.36744563459288 54.771574775000154 2 8.507970798283768 11.04679548507385 3 2.7217382821059037 5.300879647891807 4 1.3412851620482853 3.483063875889282 5 0.7757822235748392 2.5181996294920914 6 0.5128090823540605 1.9975022916615182 7 0.3494560491511636 1.588074711505518 8 0.2700947077363009 1.402769740848466 9 0.1956613289332772 1.1432147939140278 >10 0.8868493958560871 9.726541951403842 >50 0.03815651328488044 1.7380054454562854 >100 0.030013241680793976 3.826432000855691 >500 0.002230621064863075 1.0175712848525202 >1k 5.069593329234261E-4 0.4393743661550277 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTTCAAATCCCAGCAACCACATGGTGGCTCACAACCATCCGTA 1657 0.10872995927055781 No Hit GTTGTGAGCCACCATGTGGTTGCTGGGATTTGAACTCTGGACC 1603 0.10518655685618838 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 6.561856322906325E-5 0.0 3 0.0 0.0 0.0 6.561856322906325E-5 0.0 4 0.0 0.0 0.0 6.561856322906325E-5 0.0 5 0.0 0.0 0.0 6.561856322906325E-5 0.0 6 6.561856322906325E-5 0.0 0.0 6.561856322906325E-5 6.561856322906325E-5 7 6.561856322906325E-5 0.0 0.0 6.561856322906325E-5 6.561856322906325E-5 8 6.561856322906325E-5 0.0 0.0 6.561856322906325E-5 6.561856322906325E-5 9 6.561856322906325E-5 0.0 0.0 6.561856322906325E-5 1.9685568968718975E-4 10 6.561856322906325E-5 0.0 0.0 6.561856322906325E-5 1.9685568968718975E-4 11 6.561856322906325E-5 0.0 0.0 1.312371264581265E-4 1.9685568968718975E-4 12 6.561856322906325E-5 0.0 0.0 1.312371264581265E-4 1.9685568968718975E-4 13 6.561856322906325E-5 0.0 0.0 1.312371264581265E-4 1.9685568968718975E-4 14 6.561856322906325E-5 0.0 0.0 1.9685568968718975E-4 1.9685568968718975E-4 15 6.561856322906325E-5 0.0 0.0 4.5932994260344275E-4 2.62474252916253E-4 16 6.561856322906325E-5 0.0 0.0 5.24948505832506E-4 3.2809281614531625E-4 17 6.561856322906325E-5 0.0 0.0 6.561856322906325E-4 3.2809281614531625E-4 18 6.561856322906325E-5 0.0 0.0 7.87422758748759E-4 3.2809281614531625E-4 19 6.561856322906325E-5 0.0 0.0 9.186598852068855E-4 3.2809281614531625E-4 20 6.561856322906325E-5 0.0 0.0 0.0013779898278103281 3.2809281614531625E-4 21 6.561856322906325E-5 0.0 0.0 0.0019029383336428341 3.2809281614531625E-4 22 6.561856322906325E-5 0.0 0.0 0.0022310311497881503 3.2809281614531625E-4 23 6.561856322906325E-5 0.0 0.0 0.003084072471765973 5.24948505832506E-4 24 6.561856322906325E-5 0.0 0.0 0.0045276808628053646 5.24948505832506E-4 25 6.561856322906325E-5 0.0 0.0 0.005840052127386629 6.561856322906325E-4 26 6.561856322906325E-5 0.0 0.0 0.008530413219778222 7.218041955196957E-4 27 6.561856322906325E-5 0.0 0.0 0.022507167187568695 7.218041955196957E-4 28 6.561856322906325E-5 0.0 0.0 0.06798083150530952 7.218041955196957E-4 29 6.561856322906325E-5 0.0 0.0 0.13576480732093185 7.218041955196957E-4 30 6.561856322906325E-5 0.0 0.0 0.22474357905954162 7.218041955196957E-4 31 6.561856322906325E-5 0.0 0.0 0.6437181052771105 7.218041955196957E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TACTTAC 765 0.0 21.764706 31 CTTATAC 1155 0.0 21.30303 37 GTACTTA 875 0.0 20.085714 30 AGTGTAC 1015 0.0 17.497538 27 TTACATA 425 0.0 16.976469 34 GTGTACT 990 0.0 16.631313 28 CTACAGT 1190 0.0 16.47899 23 ACTTACT 350 0.0 15.857143 32 ACTTACA 665 0.0 15.857143 32 GTGTTAC 70 0.0025930137 15.857142 1 TAGTACT 130 2.5903864E-7 15.653846 4 CTTACAT 545 0.0 15.614678 33 CAGTGTA 1220 0.0 15.315573 26 TCTTATA 1935 0.0 15.297158 37 CTATAGT 110 1.4524072E-5 15.136364 4 ACAGTGT 1240 0.0 14.919354 25 TACAGTG 1315 0.0 14.771863 24 GCTACAG 1285 0.0 14.684824 22 ACATATA 315 0.0 14.68254 36 TGTACTT 1205 0.0 14.585062 29 >>END_MODULE