##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2727518.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2467659 Sequences flagged as poor quality 0 Sequence length 43 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.61180860078317 34.0 31.0 34.0 31.0 34.0 2 32.7764918086332 34.0 31.0 34.0 31.0 34.0 3 32.87123018212808 34.0 31.0 34.0 31.0 34.0 4 36.322122708202386 37.0 37.0 37.0 35.0 37.0 5 36.184927496060034 37.0 35.0 37.0 35.0 37.0 6 36.20764011559134 37.0 36.0 37.0 35.0 37.0 7 36.183800922250605 37.0 36.0 37.0 35.0 37.0 8 36.175650282312105 37.0 36.0 37.0 35.0 37.0 9 37.88942921205888 39.0 38.0 39.0 35.0 39.0 10 37.87067500007092 39.0 38.0 39.0 35.0 39.0 11 37.94340303907469 39.0 38.0 39.0 35.0 39.0 12 37.917982995219354 39.0 38.0 39.0 35.0 39.0 13 37.94890542007627 39.0 38.0 39.0 35.0 39.0 14 39.29592986713318 40.0 39.0 41.0 36.0 41.0 15 39.31521980954419 40.0 39.0 41.0 36.0 41.0 16 39.29837064197282 40.0 39.0 41.0 36.0 41.0 17 39.320656136038245 40.0 39.0 41.0 36.0 41.0 18 39.30165310523051 40.0 39.0 41.0 36.0 41.0 19 39.34187097974234 40.0 39.0 41.0 36.0 41.0 20 39.32054955729296 40.0 39.0 41.0 36.0 41.0 21 39.30128190321272 40.0 39.0 41.0 36.0 41.0 22 39.26636500424086 40.0 39.0 41.0 36.0 41.0 23 39.2200368851612 40.0 39.0 41.0 36.0 41.0 24 39.18442864269334 40.0 39.0 41.0 36.0 41.0 25 39.1218888023021 40.0 39.0 41.0 36.0 41.0 26 39.01963845085565 40.0 39.0 41.0 36.0 41.0 27 38.97103489582637 40.0 38.0 41.0 35.0 41.0 28 38.901698330279835 40.0 38.0 41.0 35.0 41.0 29 38.82129094822259 40.0 38.0 41.0 35.0 41.0 30 38.75319482959355 40.0 38.0 41.0 35.0 41.0 31 38.671503234442035 40.0 38.0 41.0 35.0 41.0 32 38.571022171215716 40.0 38.0 41.0 35.0 41.0 33 38.518773055758516 40.0 38.0 41.0 35.0 41.0 34 38.46472304317574 40.0 38.0 41.0 35.0 41.0 35 38.44381780464805 40.0 38.0 41.0 35.0 41.0 36 38.37777423866101 40.0 38.0 41.0 34.0 41.0 37 38.3537348555858 40.0 38.0 41.0 34.0 41.0 38 38.29876575329087 40.0 38.0 41.0 34.0 41.0 39 38.242546073019 40.0 38.0 41.0 34.0 41.0 40 38.172395375536084 40.0 38.0 41.0 34.0 41.0 41 38.11416407210235 40.0 38.0 41.0 34.0 41.0 42 38.054312204401015 40.0 38.0 41.0 34.0 41.0 43 36.97613406066235 39.0 36.0 40.0 31.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 2.0 10 3.0 11 2.0 12 4.0 13 1.0 14 2.0 15 5.0 16 6.0 17 15.0 18 19.0 19 46.0 20 110.0 21 241.0 22 450.0 23 923.0 24 1545.0 25 2534.0 26 4091.0 27 6249.0 28 9239.0 29 13338.0 30 18667.0 31 25782.0 32 34714.0 33 48198.0 34 69363.0 35 101810.0 36 156219.0 37 274281.0 38 621777.0 39 1078023.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.489841991944594 17.056773241359522 12.36743002173315 27.085954744962738 2 18.009862788983405 20.0910255428323 35.88088953943799 26.018222128746316 3 19.863157753968437 21.837660714061382 29.86988882985858 28.429292702111596 4 15.14123304719169 14.785592336704545 33.67624943316723 36.39692518293654 5 15.903129241114758 35.385926499569024 33.3378315237235 15.373112735592724 6 36.24033952827356 33.26922398921407 14.92844027477054 15.561996207741831 7 29.986841780002827 30.32185565347562 20.590284151902676 19.101018414618874 8 27.560331472055093 34.712575765128 19.302221255043747 18.424871507773158 9 28.21852614157791 14.359115258631764 18.19380230412711 39.22855629566322 10 16.89398737832091 26.581833227362452 32.60961097137003 23.914568422946605 11 36.89071301991078 21.210588659129968 20.66638867039571 21.23230965056355 12 22.232002071599034 23.88486415667643 29.676750312745803 24.206383458978735 13 31.601084266505218 19.268667186187393 23.600667677341157 25.529580869966228 14 22.98084946096685 19.67508476657431 25.181193998036193 32.16287177442264 15 26.39088301908813 26.6235326680064 21.94152433541263 25.04405997749284 16 24.967590740860064 25.427216645411704 24.36276649245297 25.242426121275262 17 24.73745359468225 25.196917402282892 24.96195787181292 25.103671131221937 18 24.78563691336607 25.219408354233707 25.537239950900837 24.45771478149939 19 25.984424914463467 24.858864210978908 25.528324618596006 23.628386255961622 20 25.07988340366315 24.37002033101008 25.428270275593185 25.121825989733587 21 24.679058168085625 25.309615307463467 25.912372819745354 24.098953704705554 22 25.59912046194389 24.343720100710836 24.751596553656725 25.30556288368855 23 24.8695626097447 24.612882087841147 25.42437994876926 25.09317535364489 24 24.458930508631866 24.35547212965811 25.669389490201038 25.51620787150899 25 25.073642671049768 24.07103250489634 25.13228124307289 25.723043580981003 26 24.639344415091387 24.596024004937473 25.72215204775052 25.042479532220618 27 25.3392790494959 24.91936689793849 25.127337286067487 24.614016766498125 28 24.820163563928404 25.608157366961965 24.478341618513742 25.093337450595886 29 24.7218517631488 25.41988175837909 25.498174585710586 24.36009189276152 30 25.681465713050304 24.798361524019324 24.779598801941436 24.740573960988936 31 24.86640171920026 24.775546378166514 25.499917127933802 24.858134774699423 32 24.420432482770106 24.99060850790162 25.35062583606568 25.238333173262596 33 24.47477548559181 24.449083118858805 25.44488521307036 25.631256182479024 34 24.987163947692935 24.6464361566975 26.115763969008682 24.25063592660088 35 24.76748205485442 24.445557510174623 25.6141954783866 25.17276495658436 36 24.3507713180792 24.30048073903242 26.1926789722567 25.15606897063168 37 23.76385878275726 24.066250644841933 26.68209019155402 25.487800380846785 38 24.43279237528362 23.599127756306686 26.435459680612272 25.532620187797423 39 23.370125288785847 23.97612474008767 27.480336626738133 25.173413344388347 40 24.49175514120873 23.242595512589055 27.442000697827375 24.823648648374835 41 23.5233069074779 23.679487319763385 27.622981943615386 25.174223829143326 42 23.064856205820984 23.852850008854546 27.86296647956626 25.21932730575821 43 22.724817326867285 23.498465549737627 27.548295773443577 26.228421349951514 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 296.0 1 350.0 2 404.0 3 949.5 4 1495.0 5 1495.0 6 1877.5 7 2260.0 8 2032.5 9 1805.0 10 2485.5 11 3166.0 12 3166.0 13 5481.5 14 7797.0 15 11000.5 16 14204.0 17 12982.5 18 11761.0 19 11761.0 20 13057.0 21 14353.0 22 13229.0 23 12105.0 24 14774.0 25 17443.0 26 17443.0 27 21035.5 28 24628.0 29 28527.5 30 32427.0 31 38757.5 32 45088.0 33 45088.0 34 52949.5 35 60811.0 36 69878.5 37 78946.0 38 89370.5 39 99795.0 40 99795.0 41 112075.0 42 124355.0 43 137957.5 44 151560.0 45 167517.0 46 183474.0 47 183474.0 48 201614.0 49 219754.0 50 230658.0 51 241562.0 52 242655.5 53 243749.0 54 243749.0 55 228166.5 56 212584.0 57 195663.0 58 178742.0 59 165909.5 60 153077.0 61 153077.0 62 133876.5 63 114676.0 64 96613.5 65 78551.0 66 65340.5 67 52130.0 68 52130.0 69 42713.0 70 33296.0 71 27026.5 72 20757.0 73 16917.0 74 13077.0 75 13077.0 76 10543.0 77 8009.0 78 6417.0 79 4825.0 80 3717.5 81 2610.0 82 2610.0 83 1906.0 84 1202.0 85 887.5 86 573.0 87 391.0 88 209.0 89 209.0 90 136.5 91 64.0 92 43.0 93 22.0 94 17.0 95 12.0 96 12.0 97 8.0 98 4.0 99 2.5 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 2467659.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 62.7356895412469 #Duplication Level Percentage of deduplicated Percentage of total 1 82.41083882403319 51.70100799298283 2 9.50066982178995 11.920621447474158 3 3.024151226474308 5.691666374096196 4 1.4866098052084116 3.730539648341137 5 0.8947301217596866 2.8065755570958864 6 0.5781446729500224 2.176218282727099 7 0.3932320689856299 1.7268779498281266 8 0.3026571254224757 1.5189922766360526 9 0.2169418290460253 1.224899571198753 >10 1.1312159549104324 11.945620784266044 >50 0.040866072582326045 1.7372624780619745 >100 0.01780963908042478 2.1131356255779954 >500 0.0014865232852179777 0.6191118994736258 >1k 5.17051577463658E-4 0.594743162055888 >5k 1.292628943659145E-4 0.4927269501842889 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 6832 0.2768615923026642 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 5320 0.21558894482584506 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 4847 0.19642098037046446 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2628 0.10649769680494753 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 4.0524237749218994E-5 0.0 4 0.0 0.0 0.0 8.104847549843799E-5 0.0 5 0.0 0.0 0.0 8.104847549843799E-5 0.0 6 0.0 0.0 0.0 8.104847549843799E-5 0.0 7 0.0 0.0 0.0 8.104847549843799E-5 0.0 8 0.0 0.0 0.0 8.104847549843799E-5 0.0 9 0.0 0.0 0.0 8.104847549843799E-5 4.0524237749218994E-5 10 0.0 0.0 0.0 8.104847549843799E-5 4.0524237749218994E-5 11 4.0524237749218994E-5 0.0 0.0 1.6209695099687598E-4 4.0524237749218994E-5 12 4.0524237749218994E-5 0.0 0.0 1.6209695099687598E-4 4.0524237749218994E-5 13 4.0524237749218994E-5 0.0 0.0 1.6209695099687598E-4 4.0524237749218994E-5 14 4.0524237749218994E-5 4.0524237749218994E-5 0.0 1.6209695099687598E-4 2.0262118874609498E-4 15 4.0524237749218994E-5 4.0524237749218994E-5 0.0 1.6209695099687598E-4 2.0262118874609498E-4 16 4.0524237749218994E-5 4.0524237749218994E-5 0.0 3.2419390199375195E-4 2.4314542649531398E-4 17 4.0524237749218994E-5 4.0524237749218994E-5 0.0 5.26815090739847E-4 2.4314542649531398E-4 18 4.0524237749218994E-5 4.0524237749218994E-5 0.0 7.699605172351609E-4 2.83669664244533E-4 19 4.0524237749218994E-5 4.0524237749218994E-5 0.0 8.91533230482818E-4 2.83669664244533E-4 20 4.0524237749218994E-5 4.0524237749218994E-5 0.0 0.001134678656978132 2.83669664244533E-4 21 8.104847549843799E-5 4.0524237749218994E-5 0.0 0.0016209695099687598 2.83669664244533E-4 22 8.104847549843799E-5 4.0524237749218994E-5 0.0 0.0024719785027023586 2.83669664244533E-4 23 8.104847549843799E-5 4.0524237749218994E-5 0.0 0.0032014147821883008 4.0524237749218995E-4 24 8.104847549843799E-5 4.0524237749218994E-5 0.0 0.004781860054407842 4.0524237749218995E-4 25 8.104847549843799E-5 4.0524237749218994E-5 0.0 0.006281256851128944 4.0524237749218995E-4 26 8.104847549843799E-5 4.0524237749218994E-5 0.0 0.009077429255825055 4.0524237749218995E-4 27 8.104847549843799E-5 4.0524237749218994E-5 0.0 0.02018107039911106 4.0524237749218995E-4 28 8.104847549843799E-5 4.0524237749218994E-5 0.0 0.06248837460929569 4.0524237749218995E-4 29 8.104847549843799E-5 4.0524237749218994E-5 0.0 0.1280160670497828 4.0524237749218995E-4 30 8.104847549843799E-5 4.0524237749218994E-5 0.0 0.21259015123240285 4.0524237749218995E-4 31 8.104847549843799E-5 4.0524237749218994E-5 0.0 0.5973677886612372 4.0524237749218995E-4 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ACTAACG 45 0.0038270329 20.555557 8 CTTATAC 1625 0.0 20.036922 37 TATACTG 325 0.0 17.076923 5 CGACTTA 230 0.0 15.282607 19 TCTTATA 2810 0.0 15.208185 37 TATACCG 110 1.4531321E-5 15.136364 5 GTCTTAG 315 0.0 14.682539 1 TTATACT 345 0.0 13.942028 4 TCGTTAC 680 0.0 13.875 23 AGGGCGT 735 0.0 13.843537 10 CTCGTTA 770 0.0 13.694805 22 GACCGTG 285 0.0 13.631579 7 ATAGCGT 95 0.0012457817 13.631579 6 GTACTTA 760 0.0 13.631579 30 CGTTATG 125 4.8487847E-5 13.32 24 GGGCGTC 695 0.0 13.309353 11 GCGTATA 85 0.009408726 13.058824 9 ATTAGAC 130 7.004157E-5 12.807693 3 CTCTTAT 4465 0.0 12.761478 37 TACCGTG 175 5.311613E-7 12.685715 7 >>END_MODULE