##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2727513.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1183556 Sequences flagged as poor quality 0 Sequence length 43 %GC 52 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.930013450990067 33.0 31.0 34.0 30.0 34.0 2 32.12203647313689 33.0 31.0 34.0 30.0 34.0 3 32.21067275228211 34.0 31.0 34.0 30.0 34.0 4 35.85556323486172 37.0 35.0 37.0 35.0 37.0 5 35.536182487351674 37.0 35.0 37.0 33.0 37.0 6 35.53575665198774 37.0 35.0 37.0 33.0 37.0 7 35.507400579271284 37.0 35.0 37.0 33.0 37.0 8 35.47618617116554 37.0 35.0 37.0 33.0 37.0 9 37.13170732943773 39.0 37.0 39.0 33.0 39.0 10 36.993239863597495 39.0 37.0 39.0 33.0 39.0 11 37.1124272953709 39.0 37.0 39.0 33.0 39.0 12 37.06403414794061 39.0 37.0 39.0 33.0 39.0 13 37.129284968349616 39.0 37.0 39.0 33.0 39.0 14 38.27940714254332 40.0 38.0 41.0 34.0 41.0 15 38.26444122627066 40.0 38.0 41.0 34.0 41.0 16 38.22188979651153 40.0 38.0 41.0 34.0 41.0 17 38.249150019095 40.0 38.0 41.0 34.0 41.0 18 38.208680451115114 40.0 38.0 41.0 33.0 41.0 19 38.27215104312766 40.0 38.0 41.0 34.0 41.0 20 38.2371463623183 40.0 38.0 41.0 34.0 41.0 21 38.20519350161716 40.0 38.0 41.0 34.0 41.0 22 38.191036165589125 40.0 38.0 41.0 34.0 41.0 23 38.12832345913501 40.0 38.0 41.0 34.0 41.0 24 38.06455714811973 40.0 37.0 41.0 33.0 41.0 25 37.97700320052452 40.0 37.0 41.0 33.0 41.0 26 37.84126902318099 40.0 37.0 41.0 33.0 41.0 27 37.76352280753932 39.0 37.0 41.0 33.0 41.0 28 37.64975801736462 39.0 37.0 40.0 33.0 41.0 29 37.54089709316669 39.0 37.0 40.0 32.0 41.0 30 37.476673685064334 39.0 37.0 40.0 32.0 41.0 31 37.37253328106148 39.0 37.0 40.0 32.0 41.0 32 37.26266522243139 39.0 36.0 40.0 31.0 41.0 33 37.211379943154355 39.0 36.0 40.0 31.0 41.0 34 37.154663573164264 39.0 36.0 40.0 31.0 41.0 35 37.15337423831234 39.0 36.0 40.0 31.0 41.0 36 37.05501471835722 39.0 36.0 40.0 31.0 41.0 37 37.05462774891936 39.0 36.0 40.0 31.0 41.0 38 37.03444450452704 39.0 36.0 40.0 31.0 41.0 39 36.957488281078376 39.0 36.0 40.0 31.0 41.0 40 36.9089954340986 39.0 36.0 40.0 31.0 41.0 41 36.84668068093102 39.0 36.0 40.0 31.0 41.0 42 36.813272037824994 39.0 36.0 40.0 31.0 41.0 43 35.655004072473126 38.0 34.0 40.0 28.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 1.0 11 0.0 12 2.0 13 0.0 14 3.0 15 3.0 16 8.0 17 19.0 18 35.0 19 73.0 20 158.0 21 303.0 22 602.0 23 1099.0 24 1763.0 25 2845.0 26 4357.0 27 6464.0 28 9185.0 29 12945.0 30 17696.0 31 24112.0 32 31126.0 33 42075.0 34 58103.0 35 82250.0 36 125476.0 37 207736.0 38 351867.0 39 203250.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.14776825093194 16.544886764969295 12.48635468030241 27.820990303796357 2 18.93556367421567 19.851532162398737 34.929145726944896 26.283758436440692 3 20.568946463031747 21.338660781576877 29.707424067809214 28.38496868758217 4 16.475857500616787 14.63428853387588 32.17194623659548 36.717907728911854 5 16.801063912480693 35.10877389831998 32.42575763208501 15.664404557114322 6 37.836485979539624 31.726677909621515 14.407598795494255 16.029237315344606 7 30.650936668818375 30.27647192021332 19.619350499680625 19.45324091128768 8 28.38192700641119 34.76244470054649 18.835864124722445 18.019764168319877 9 30.03322191767859 13.699985467523293 16.656415074571886 39.61037754022623 10 17.30480011085238 26.23914711259966 31.738675652018156 24.717377124529808 11 38.43899232482451 20.606460530807162 19.182869251645045 21.771677892723286 12 22.71561294945064 22.963847929460034 28.585128206861356 25.73541091422797 13 32.9420830108588 18.424814710922004 22.305999885092046 26.32710239312715 14 23.762120254554915 19.096688285133954 24.022690941535508 33.118500518775626 15 28.328613094775406 25.51767723707201 20.724325676182623 25.42938399196996 16 25.630979860691 24.861687997864063 23.730943022552374 25.776389118892556 17 26.009838148765247 23.924427741484138 23.45043242567314 26.615301684077476 18 25.743606555160888 25.047484022724735 24.128558344514328 25.080351077600042 19 27.74063922619631 24.219724288500082 23.95467557090666 24.08496091439695 20 26.15575435382863 23.095907586966735 23.928060860660587 26.82027719854405 21 25.559584844316618 24.82763806697782 25.005491924336493 24.60728516436907 22 27.110504276941693 23.097005971834033 22.68528062888448 27.1072091223398 23 25.802750355707715 23.91226101680022 24.21465481988178 26.070333807610286 24 25.129862887772102 23.0552673468767 24.659923146855746 27.15494661849545 25 26.269056977447626 22.56124763002342 23.535852971891487 27.633842420637468 26 25.580031701077093 23.38841592624261 24.6935506220238 26.3380017506565 27 27.25963114546333 23.776568240117072 23.570240867352286 25.39355974706731 28 25.688771802939613 25.50162391978073 22.198611641527734 26.610992635751916 29 25.952215188803912 24.814710922001158 24.23729844637685 24.995775442818083 30 27.959640270506846 23.34608586327981 22.823170175302224 25.871103690911117 31 26.13623689964818 23.914711259965728 24.368344210159893 25.5807076302262 32 25.667226561311846 23.818475847361682 23.78763657993369 26.72666101139279 33 25.60174592499214 23.17220308967214 23.892828053763402 27.333222931572315 34 26.265508349414812 23.756036892212958 25.247305577429373 24.731149180942854 35 26.244808019223427 22.857304597332107 24.279290544765097 26.61859683867937 36 25.449915339874075 22.901408974311313 25.44552180040488 26.20315388540973 37 24.329224810655347 22.889580214201946 26.21641899496095 26.56477598018176 38 26.08309197029967 21.691326815123237 25.285242100922982 26.940339113654105 39 23.777244169266176 22.90605598721142 27.08321363754651 26.233486205975893 40 26.25562288560913 21.16055345078729 26.798985430347187 25.78483823325639 41 24.663133810314005 22.182980779954644 26.892010179492985 26.261875230238367 42 23.816279077627083 22.17115201984528 27.740047788190843 26.272521114336794 43 23.341016394661512 21.596358769673763 26.80194262037453 28.260682215290196 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 13.0 1 23.0 2 33.0 3 77.0 4 121.0 5 121.0 6 166.5 7 212.0 8 191.0 9 170.0 10 261.5 11 353.0 12 353.0 13 633.0 14 913.0 15 1345.5 16 1778.0 17 1639.0 18 1500.0 19 1500.0 20 1639.0 21 1778.0 22 1854.5 23 1931.0 24 2525.5 25 3120.0 26 3120.0 27 4106.0 28 5092.0 29 6294.5 30 7497.0 31 10157.5 32 12818.0 33 12818.0 34 16583.5 35 20349.0 36 24043.0 37 27737.0 38 32686.0 39 37635.0 40 37635.0 41 43378.5 42 49122.0 43 57184.5 44 65247.0 45 77100.0 46 88953.0 47 88953.0 48 102415.5 49 115878.0 50 126928.0 51 137978.0 52 138970.5 53 139963.0 54 139963.0 55 128410.0 56 116857.0 57 105825.0 58 94793.0 59 88892.5 60 82992.0 61 82992.0 62 71607.5 63 60223.0 64 50017.0 65 39811.0 66 33021.0 67 26231.0 68 26231.0 69 21396.5 70 16562.0 71 13594.5 72 10627.0 73 8583.5 74 6540.0 75 6540.0 76 5369.0 77 4198.0 78 3271.5 79 2345.0 80 1803.0 81 1261.0 82 1261.0 83 908.0 84 555.0 85 391.5 86 228.0 87 160.0 88 92.0 89 92.0 90 65.5 91 39.0 92 22.5 93 6.0 94 5.5 95 5.0 96 5.0 97 2.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 1183556.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 68.41883743681055 #Duplication Level Percentage of deduplicated Percentage of total 1 86.10138701588953 58.909568013240566 2 7.780102612339386 10.64611151750707 3 2.4582461727903624 5.045710358274166 4 1.1933814485887586 3.2659908532439905 5 0.6572053406915557 2.248261268368962 6 0.4121433885502153 1.691902290112406 7 0.29247380982249194 1.4007502634138802 8 0.2069910468802891 1.1329669429902185 9 0.15633466103346452 0.9626612183088742 >10 0.6715470501660888 7.761299719998845 >50 0.039515307000641105 1.8843819631421062 >100 0.028074915729403477 3.7668129232650274 >500 0.0021025199430476068 0.9016133778737565 >1k 4.947105748347309E-4 0.3819692902601724 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTACGGGAAGCAGTGGTATCAACGCAGAGTACGGGAAGCAGTG 1214 0.10257224837692513 No Hit GTTGTGAGCCACCATGTGGTTGCTGGGATTTGAACTCTGGACC 1186 0.10020649635505206 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 8.449114363832382E-5 0.0 3 0.0 0.0 0.0 8.449114363832382E-5 0.0 4 0.0 0.0 0.0 1.6898228727664765E-4 0.0 5 8.449114363832382E-5 0.0 0.0 2.534734309149715E-4 0.0 6 8.449114363832382E-5 0.0 0.0 2.534734309149715E-4 0.0 7 8.449114363832382E-5 0.0 0.0 2.534734309149715E-4 0.0 8 8.449114363832382E-5 0.0 0.0 2.534734309149715E-4 0.0 9 8.449114363832382E-5 0.0 0.0 5.06946861829943E-4 1.6898228727664765E-4 10 8.449114363832382E-5 0.0 0.0 5.914380054682668E-4 1.6898228727664765E-4 11 8.449114363832382E-5 0.0 0.0 5.914380054682668E-4 1.6898228727664765E-4 12 8.449114363832382E-5 0.0 0.0 5.914380054682668E-4 1.6898228727664765E-4 13 8.449114363832382E-5 0.0 0.0 5.914380054682668E-4 1.6898228727664765E-4 14 8.449114363832382E-5 0.0 0.0 6.759291491065906E-4 3.379645745532953E-4 15 8.449114363832382E-5 0.0 0.0 6.759291491065906E-4 3.379645745532953E-4 16 8.449114363832382E-5 0.0 0.0 6.759291491065906E-4 3.379645745532953E-4 17 8.449114363832382E-5 0.0 0.0 8.449114363832383E-4 3.379645745532953E-4 18 8.449114363832382E-5 0.0 0.0 0.0012673671545748574 4.2245571819161915E-4 19 8.449114363832382E-5 0.0 0.0 0.001520840585489829 4.2245571819161915E-4 20 8.449114363832382E-5 0.0 0.0 0.0017743140164048004 4.2245571819161915E-4 21 1.6898228727664765E-4 0.0 0.0 0.002534734309149715 4.2245571819161915E-4 22 1.6898228727664765E-4 0.0 0.0 0.0032106634582563056 4.2245571819161915E-4 23 1.6898228727664765E-4 0.0 0.0 0.004140066038277867 5.06946861829943E-4 24 1.6898228727664765E-4 0.0 0.0 0.005407433192852725 5.06946861829943E-4 25 1.6898228727664765E-4 0.0 0.0 0.006505818060150935 5.06946861829943E-4 26 1.6898228727664765E-4 0.0 0.0 0.008787078938385678 5.06946861829943E-4 27 1.6898228727664765E-4 0.0 0.0 0.021460750484134254 5.06946861829943E-4 28 1.6898228727664765E-4 0.0 0.0 0.06750842376702074 5.06946861829943E-4 29 1.6898228727664765E-4 0.0 0.0 0.14507129362700202 5.06946861829943E-4 30 1.6898228727664765E-4 0.0 0.0 0.24020832136375464 5.06946861829943E-4 31 1.6898228727664765E-4 0.0 0.0 0.6694233310464397 5.06946861829943E-4 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ACGTGTA 40 0.0019312204 23.125002 2 GCTTATA 225 0.0 23.022223 1 CTTATAC 960 0.0 21.776043 37 GTAGTAC 70 5.1021325E-6 21.142859 3 ACATATA 185 0.0 20.0 36 CGACTTA 225 0.0 18.911112 19 TACTTAC 560 0.0 18.830359 31 GTACTTA 555 0.0 18.666666 30 CATATAA 180 0.0 18.5 37 TTATAGC 280 0.0 18.5 3 TTACATA 240 0.0 18.5 34 ATAGCAA 320 0.0 17.34375 5 TACATAT 235 0.0 17.319147 35 AGTGTAC 705 0.0 17.319147 27 TAGCAAT 300 0.0 17.266666 6 CTTATAG 300 0.0 17.266666 2 CTAATAC 75 2.0673311E-4 17.266666 3 ACTTACA 435 0.0 16.586208 32 TATAGCA 295 0.0 16.305084 4 TTACACG 80 3.3826704E-4 16.1875 4 >>END_MODULE