##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2727509.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2654070 Sequences flagged as poor quality 0 Sequence length 43 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.58752745782892 34.0 31.0 34.0 31.0 34.0 2 32.7574031581684 34.0 31.0 34.0 31.0 34.0 3 32.8474983704273 34.0 31.0 34.0 31.0 34.0 4 36.30422935340816 37.0 37.0 37.0 35.0 37.0 5 36.1658143907282 37.0 35.0 37.0 35.0 37.0 6 36.19013552769897 37.0 36.0 37.0 35.0 37.0 7 36.16585885074621 37.0 36.0 37.0 35.0 37.0 8 36.15542468736695 37.0 36.0 37.0 35.0 37.0 9 37.864334022840396 39.0 38.0 39.0 35.0 39.0 10 37.84163982110494 39.0 38.0 39.0 35.0 39.0 11 37.91793886370744 39.0 38.0 39.0 35.0 39.0 12 37.89342556903171 39.0 38.0 39.0 35.0 39.0 13 37.92238448872863 39.0 38.0 39.0 35.0 39.0 14 39.27497541511716 40.0 39.0 41.0 36.0 41.0 15 39.298448043947594 40.0 39.0 41.0 36.0 41.0 16 39.27465854329388 40.0 39.0 41.0 36.0 41.0 17 39.29234647164544 40.0 39.0 41.0 36.0 41.0 18 39.270774320195024 40.0 39.0 41.0 36.0 41.0 19 39.313325948448984 40.0 39.0 41.0 36.0 41.0 20 39.28731269333514 40.0 39.0 41.0 36.0 41.0 21 39.266441352338106 40.0 39.0 41.0 36.0 41.0 22 39.23718063201046 40.0 39.0 41.0 36.0 41.0 23 39.1961534548825 40.0 39.0 41.0 36.0 41.0 24 39.157335714581755 40.0 39.0 41.0 36.0 41.0 25 39.097804504025895 40.0 39.0 41.0 36.0 41.0 26 38.99855731009355 40.0 39.0 41.0 36.0 41.0 27 38.95299068977081 40.0 38.0 41.0 35.0 41.0 28 38.878793701748634 40.0 38.0 41.0 35.0 41.0 29 38.80009231105434 40.0 38.0 41.0 35.0 41.0 30 38.74423244300263 40.0 38.0 41.0 35.0 41.0 31 38.67325918306601 40.0 38.0 41.0 35.0 41.0 32 38.582008763898465 40.0 38.0 41.0 35.0 41.0 33 38.53649338563037 40.0 38.0 41.0 35.0 41.0 34 38.49081410814334 40.0 38.0 41.0 35.0 41.0 35 38.47386052364858 40.0 38.0 41.0 35.0 41.0 36 38.40834341219335 40.0 38.0 41.0 34.0 41.0 37 38.3990279080808 40.0 38.0 41.0 34.0 41.0 38 38.35693519763985 40.0 38.0 41.0 34.0 41.0 39 38.302634444457006 40.0 38.0 41.0 34.0 41.0 40 38.2438669665834 40.0 38.0 41.0 34.0 41.0 41 38.19057221550298 40.0 38.0 41.0 34.0 41.0 42 38.14666757093822 40.0 38.0 41.0 34.0 41.0 43 37.07037644071181 39.0 36.0 40.0 31.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 2.0 10 2.0 11 3.0 12 3.0 13 2.0 14 1.0 15 1.0 16 9.0 17 14.0 18 27.0 19 71.0 20 113.0 21 268.0 22 505.0 23 1010.0 24 1720.0 25 2750.0 26 4268.0 27 6731.0 28 9955.0 29 14519.0 30 20225.0 31 27484.0 32 37681.0 33 52067.0 34 75418.0 35 109431.0 36 166631.0 37 287920.0 38 678875.0 39 1156364.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.2481057394869 16.863797865165576 12.360826956334988 27.527269439012535 2 18.274273097544526 19.7375351818151 35.98944262962168 25.9987490910187 3 20.168797356512826 21.627575761001026 29.422471901645398 28.781154980840746 4 15.487873341697844 14.530438157245287 33.20066916094903 36.78101934010783 5 16.20793724355424 35.18256865870154 33.10364835893552 15.505845738808697 6 36.91296763084621 32.61918487455116 14.825155327478177 15.642692167124453 7 30.341475545106196 29.851887855256265 20.46287400106252 19.34376259857502 8 27.429155975539455 34.81185500005652 19.300508275968607 18.45848074843542 9 28.61002158948332 14.269179034464049 17.940107080823037 39.18069229522959 10 17.03738032531169 26.27394906690479 32.59484489858971 24.0938257091938 11 37.309453028744535 20.87107725116519 20.46524771388848 21.354222006201795 12 22.21697242348544 23.409781957521844 29.637161039460153 24.736084579532566 13 31.724897986865457 19.056166566820014 23.356090834077474 25.86284461223706 14 23.21140738563791 19.431966752949243 24.637971116059486 32.71865474535336 15 26.765043876009297 26.268711827495128 21.62169799590817 25.3445463005874 16 25.285429547826542 25.188182677924846 24.107766562298657 25.418621211949947 17 25.180421013763766 24.83724995949617 24.47282852373901 25.509500503001053 18 24.971647319023234 25.105291118923013 25.19545452832819 24.72760703372556 19 26.388979944010522 24.708843399006057 24.892485880176483 24.00969077680694 20 25.337613552016336 23.991793735658817 24.900586646169845 25.770006066155 21 24.895311728778818 24.97345586212873 25.661757225694874 24.469475183397574 22 25.908434969688066 23.807171626972913 24.21590236881469 26.06849103452433 23 25.012640962747778 24.36145241082564 25.182832404571094 25.44307422185549 24 24.79263922956064 24.034143786712484 25.221565369413767 25.95165161431311 25 25.49586107374711 23.728311611977077 24.62188261801686 26.15394469625895 26 24.968520046569985 24.1922405965178 25.25815068931867 25.581088667593544 27 25.880025771739252 24.667284585561045 24.503724468457875 24.948965174241824 28 25.113655630785924 25.270810491057134 23.90189407212319 25.71363980603375 29 25.034155090106893 25.16041400565923 25.127747195816237 24.67768370841764 30 26.327828580255986 24.201057244157088 24.244462278688957 25.226651896897973 31 25.381320010399122 24.22754486505631 25.102088490507036 25.289046634037536 32 24.869012497786418 24.602327745688697 24.873307787661968 25.655351968862917 33 24.949831767813208 23.836447418493105 25.004916976568065 26.208803837125622 34 25.43365472651437 24.170010587512763 25.73858262969703 24.657752056275832 35 25.402419679963227 23.833320146039856 25.134265486592287 25.62999468740463 36 24.865772191389073 23.722057067070573 25.822265426307524 25.58990531523283 37 24.181916829623937 23.500811960498407 26.352658369975167 25.96461283990249 38 25.03784753228061 22.799285625473328 26.182617640077314 25.980249202168743 39 23.796169656414488 23.232695445108835 27.3122411993655 25.658893699111175 40 25.021457610387067 22.50675377815958 27.205499478159958 25.266289133293395 41 23.89092977954613 22.987374108444765 27.360582049456116 25.761114062552988 42 23.502921927454814 23.279792921814423 27.69953316981089 25.517751980919872 43 23.00696665875429 22.879464369816922 27.2007897304894 26.91277924093939 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 189.0 1 271.5 2 354.0 3 723.0 4 1092.0 5 1092.0 6 1346.0 7 1600.0 8 1472.5 9 1345.0 10 1845.0 11 2345.0 12 2345.0 13 3821.0 14 5297.0 15 6862.0 16 8427.0 17 7877.5 18 7328.0 19 7328.0 20 8624.5 21 9921.0 22 9786.0 23 9651.0 24 12167.5 25 14684.0 26 14684.0 27 18231.5 28 21779.0 29 25823.0 30 29867.0 31 36371.0 32 42875.0 33 42875.0 34 51169.5 35 59464.0 36 69435.5 37 79407.0 38 91345.0 39 103283.0 40 103283.0 41 116489.5 42 129696.0 43 145507.0 44 161318.0 45 181889.5 46 202461.0 47 202461.0 48 222309.5 49 242158.0 50 257100.5 51 272043.0 52 272317.5 53 272592.0 54 272592.0 55 255184.0 56 237776.0 57 218763.0 58 199750.0 59 185967.5 60 172185.0 61 172185.0 62 150462.0 63 128739.0 64 107341.5 65 85944.0 66 71502.0 67 57060.0 68 57060.0 69 46920.0 70 36780.0 71 30205.0 72 23630.0 73 18907.5 74 14185.0 75 14185.0 76 11369.0 77 8553.0 78 6828.5 79 5104.0 80 3979.0 81 2854.0 82 2854.0 83 2093.0 84 1332.0 85 994.5 86 657.0 87 441.5 88 226.0 89 226.0 90 148.0 91 70.0 92 51.5 93 33.0 94 21.5 95 10.0 96 10.0 97 7.0 98 4.0 99 3.0 100 2.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 2654070.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 62.82648388684105 #Duplication Level Percentage of deduplicated Percentage of total 1 82.86195373892377 52.059252014106626 2 9.158644123480261 11.508108148982881 3 3.0226548713037937 5.697083327023482 4 1.4629818584297924 3.6765602462152054 5 0.8352251928615386 2.6237131060599577 6 0.5869529069659396 2.2125712411098073 7 0.3973142459259771 1.747329994877656 8 0.2893967900497832 1.454542621357298 9 0.2149609348304894 1.2154715737585224 >10 1.1019451929917716 11.91173118675585 >50 0.04452711324448121 1.9158934865553017 >100 0.02134460554800445 2.583664200461124 >500 0.0014988753174619708 0.6542866704270153 >1k 5.995501269550076E-4 0.7397921823092685 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 3746 0.14114171819130616 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 3267 0.12309396511772486 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 2766 0.10421729645412518 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 3.767798136447042E-5 0.0 3 0.0 0.0 0.0 7.535596272894084E-5 0.0 4 0.0 0.0 0.0 7.535596272894084E-5 0.0 5 0.0 0.0 0.0 1.1303394409341125E-4 0.0 6 0.0 0.0 0.0 1.1303394409341125E-4 3.767798136447042E-5 7 0.0 0.0 0.0 1.1303394409341125E-4 3.767798136447042E-5 8 0.0 0.0 0.0 1.1303394409341125E-4 3.767798136447042E-5 9 0.0 0.0 0.0 1.5071192545788168E-4 7.535596272894084E-5 10 0.0 0.0 0.0 1.883899068223521E-4 7.535596272894084E-5 11 0.0 0.0 0.0 2.637458695512929E-4 7.535596272894084E-5 12 0.0 0.0 0.0 2.637458695512929E-4 7.535596272894084E-5 13 0.0 0.0 0.0 3.3910183228023374E-4 1.1303394409341125E-4 14 0.0 0.0 0.0 4.52135776373645E-4 2.260678881868225E-4 15 0.0 0.0 0.0 5.651697204670563E-4 2.260678881868225E-4 16 3.767798136447042E-5 0.0 0.0 6.028477018315267E-4 2.260678881868225E-4 17 3.767798136447042E-5 0.0 0.0 9.0427155274729E-4 2.260678881868225E-4 18 3.767798136447042E-5 0.0 0.0 0.0012433733850275238 3.0142385091576335E-4 19 3.767798136447042E-5 0.0 0.0 0.0014694412732143463 3.0142385091576335E-4 20 3.767798136447042E-5 0.0 0.0 0.0017331871427656391 3.0142385091576335E-4 21 3.767798136447042E-5 0.0 0.0 0.0022983568632326955 3.0142385091576335E-4 22 3.767798136447042E-5 0.0 0.0 0.0033910183228023374 3.0142385091576335E-4 23 3.767798136447042E-5 0.0 0.0 0.004596713726465391 3.3910183228023374E-4 24 3.767798136447042E-5 0.0 0.0 0.0071964944406138496 3.3910183228023374E-4 25 3.767798136447042E-5 0.0 0.0 0.009457173322482075 3.3910183228023374E-4 26 3.767798136447042E-5 0.0 0.0 0.013827819160760643 3.3910183228023374E-4 27 3.767798136447042E-5 0.0 0.0 0.030556842886585507 3.3910183228023374E-4 28 3.767798136447042E-5 0.0 0.0 0.0803671342504154 3.3910183228023374E-4 29 3.767798136447042E-5 0.0 0.0 0.14867731446420027 3.3910183228023374E-4 30 3.767798136447042E-5 0.0 0.0 0.24140282660216197 3.3910183228023374E-4 31 3.767798136447042E-5 0.0 0.0 0.6634715738469595 3.3910183228023374E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CTTATAC 2025 0.0 21.469135 37 CGTATAC 60 9.2411606E-4 18.5 3 CTAGTAC 210 0.0 17.619047 3 TATACTA 170 8.54925E-11 16.32353 5 TACTTAC 1170 0.0 16.286324 31 TAGTACT 210 0.0 15.857142 4 TCTTATA 3335 0.0 15.476762 37 TACGGAT 1585 0.0 14.940064 27 GTACTTA 1335 0.0 14.827716 30 ATACCGT 150 8.11342E-8 14.8 6 TCGTTAC 985 0.0 14.649745 23 ACGGATG 1705 0.0 14.105572 28 CCGACTA 145 8.921852E-7 14.034483 13 AGTGTAC 1440 0.0 14.003472 27 CGTTACG 795 0.0 13.729559 24 GTATACG 95 0.0012458258 13.6315775 1 GTGTTAG 340 0.0 13.6029415 1 ATCTCGT 1280 0.0 13.5859375 20 GTATTAT 260 1.8189894E-12 13.519231 1 TACACTC 315 0.0 13.507937 5 >>END_MODULE