##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2727508.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1722211 Sequences flagged as poor quality 0 Sequence length 43 %GC 51 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.51632000956909 34.0 31.0 34.0 31.0 34.0 2 32.693553809608694 34.0 31.0 34.0 31.0 34.0 3 32.78552686052986 34.0 31.0 34.0 31.0 34.0 4 36.260893700017014 37.0 37.0 37.0 35.0 37.0 5 36.11318125363268 37.0 35.0 37.0 35.0 37.0 6 36.13118369351955 37.0 35.0 37.0 35.0 37.0 7 36.10658275902314 37.0 35.0 37.0 35.0 37.0 8 36.09296189607429 37.0 35.0 37.0 35.0 37.0 9 37.79756313250815 39.0 38.0 39.0 35.0 39.0 10 37.76667957642821 39.0 37.0 39.0 35.0 39.0 11 37.84748210294789 39.0 38.0 39.0 35.0 39.0 12 37.82321329964795 39.0 38.0 39.0 35.0 39.0 13 37.853887822107744 39.0 38.0 39.0 35.0 39.0 14 39.187762707356995 40.0 39.0 41.0 36.0 41.0 15 39.20073498543442 40.0 39.0 41.0 36.0 41.0 16 39.18235976892495 40.0 39.0 41.0 36.0 41.0 17 39.20170873371497 40.0 39.0 41.0 36.0 41.0 18 39.171193309066076 40.0 39.0 41.0 36.0 41.0 19 39.211931639038426 40.0 39.0 41.0 36.0 41.0 20 39.18473926830104 40.0 39.0 41.0 36.0 41.0 21 39.16519230222081 40.0 39.0 41.0 36.0 41.0 22 39.136805536603816 40.0 39.0 41.0 36.0 41.0 23 39.09158111288338 40.0 39.0 41.0 36.0 41.0 24 39.0548004861193 40.0 39.0 41.0 36.0 41.0 25 38.992639113325836 40.0 38.0 41.0 36.0 41.0 26 38.88661900313028 40.0 38.0 41.0 35.0 41.0 27 38.84003063503833 40.0 38.0 41.0 35.0 41.0 28 38.76854984667965 40.0 38.0 41.0 35.0 41.0 29 38.686303826883 40.0 38.0 41.0 35.0 41.0 30 38.63390258220392 40.0 38.0 41.0 35.0 41.0 31 38.56646427179945 40.0 38.0 41.0 35.0 41.0 32 38.480869649537716 40.0 38.0 41.0 34.0 41.0 33 38.43438986279846 40.0 38.0 41.0 34.0 41.0 34 38.387667945449195 40.0 38.0 41.0 34.0 41.0 35 38.38258726718155 40.0 38.0 41.0 34.0 41.0 36 38.31971518007956 40.0 38.0 41.0 34.0 41.0 37 38.30794310337119 40.0 38.0 41.0 34.0 41.0 38 38.27167751222121 40.0 38.0 41.0 34.0 41.0 39 38.22433720374565 40.0 38.0 41.0 34.0 41.0 40 38.17155098881612 40.0 38.0 41.0 34.0 41.0 41 38.12773115489333 40.0 38.0 41.0 34.0 41.0 42 38.08676985572615 40.0 38.0 41.0 33.0 41.0 43 36.99869644311876 39.0 36.0 40.0 31.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 1.0 9 0.0 10 3.0 11 1.0 12 0.0 13 2.0 14 1.0 15 3.0 16 3.0 17 9.0 18 20.0 19 34.0 20 92.0 21 190.0 22 380.0 23 670.0 24 1203.0 25 1965.0 26 3201.0 27 4797.0 28 6769.0 29 10089.0 30 13940.0 31 19531.0 32 26392.0 33 36638.0 34 51553.0 35 74320.0 36 112671.0 37 194533.0 38 455156.0 39 708044.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.145642432895855 16.649527845310477 12.318002846341129 27.88682687545254 2 18.52949493412828 19.401049000383807 35.67750989861288 26.391946166875023 3 20.198454196378957 21.17127343862047 29.355404186827283 29.274868178173293 4 15.74824455307741 14.430055318424978 32.73518750025403 37.086512628243575 5 16.377958333793014 34.91807914361249 33.0039698968361 15.6999926257584 6 37.34838530238165 32.240706858799534 14.71271522478953 15.69819261402929 7 30.69049030577554 29.628076931340004 20.147299024335577 19.534133738548878 8 27.713619295196697 34.540541199655564 19.06961458264986 18.676224922497884 9 28.77945849840699 14.093278930398192 17.614682521479654 39.51258004971516 10 17.239234913724278 26.08182156541794 32.26323603786063 24.41570748299715 11 37.71825868026624 20.68120572914701 20.17911858651466 21.42141700407209 12 22.4927143073642 23.202325382894433 29.21709360815835 25.08786670158302 13 32.134854556149044 18.720528436991753 22.95642055474039 26.188196452118817 14 23.490617584024257 19.131279500595454 24.159815492991278 33.21828742238901 15 27.06846025254745 26.045705201046793 21.140905498803573 25.744929047602184 16 25.518708218679357 25.00309195563145 23.736986931334197 25.741212894354987 17 25.484449930931806 24.53050177939869 24.0014725257242 25.9835757639453 18 25.3934041763756 24.914252667065767 24.65894132600477 25.033401830553863 19 26.917665721563733 24.31711329215758 24.4081009818193 24.357120004459386 20 25.736567702796 23.745812795296278 24.439688284420434 26.077931217487286 21 25.302764876080808 24.75858068494511 25.17606727630935 24.762587162664737 22 26.37626864536343 23.588573061024462 23.683799487983762 26.351358805628344 23 25.464823996595076 24.089673100450526 24.683386646583955 25.762116256370444 24 25.098434512379725 23.686818862497102 24.788542170500595 26.426204454622575 25 25.916162421445456 23.345919866961715 24.163763905816417 26.57415380577641 26 25.36814594727359 23.894400860289476 24.833019879677927 25.904433312759007 27 26.25810658508162 24.32048105603785 24.099892521880303 25.321519837000228 28 25.51359850796447 25.02504048574768 23.341216610508237 26.12014439577961 29 25.458146533729025 24.834645696723573 24.702780321342736 25.004427448204662 30 26.7669292554745 23.903458983829506 23.687457576336467 25.642154184359523 31 25.686399633958906 23.94503344828247 24.679670493336765 25.688896424421863 32 25.21851271417962 24.258641943408794 24.41652039151997 26.10632495089161 33 25.25224841787679 23.538288862398392 24.538398605048975 26.671064114675847 34 25.827671522246693 23.828729464624253 25.38126861342774 24.96233039970131 35 25.62206373086689 23.382152361121836 24.84678125967143 26.149002648339838 36 25.141692858772824 23.269100011554915 25.534443805085438 26.054763324586826 37 24.440907647204668 22.995904682991807 26.2121772535421 26.351010416261424 38 25.28075828107009 22.299300143826745 25.881439614542007 26.538501960561163 39 23.967272302871134 22.761032184790363 27.261642156506955 26.01005335583155 40 25.300500345195797 21.892149103681255 27.21507411112808 25.592276439994865 41 24.125499140349238 22.529120996207784 27.23319035820814 26.112189505234838 42 23.52638555902848 22.66859287276646 27.77638744613755 26.02863412206751 43 23.04229853368722 22.272996746623964 27.250087242503966 27.43461747718485 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 49.0 1 77.5 2 106.0 3 214.0 4 322.0 5 322.0 6 433.0 7 544.0 8 486.0 9 428.0 10 599.0 11 770.0 12 770.0 13 1308.0 14 1846.0 15 2584.0 16 3322.0 17 3126.5 18 2931.0 19 2931.0 20 3512.5 21 4094.0 22 4350.5 23 4607.0 24 5950.0 25 7293.0 26 7293.0 27 9334.5 28 11376.0 29 13641.5 30 15907.0 31 20141.0 32 24375.0 33 24375.0 34 29904.0 35 35433.0 36 41723.5 37 48014.0 38 55615.5 39 63217.0 40 63217.0 41 72379.0 42 81541.0 43 92211.5 44 102882.0 45 117102.0 46 131322.0 47 131322.0 48 145413.5 49 159505.0 50 170052.0 51 180599.0 52 180788.0 53 180977.0 54 180977.0 55 170438.0 56 159899.0 57 147562.0 58 135225.0 59 126307.5 60 117390.0 61 117390.0 62 102257.5 63 87125.0 64 73280.0 65 59435.0 66 49369.5 67 39304.0 68 39304.0 69 32077.5 70 24851.0 71 20240.0 72 15629.0 73 12665.5 74 9702.0 75 9702.0 76 7694.5 77 5687.0 78 4496.5 79 3306.0 80 2553.0 81 1800.0 82 1800.0 83 1312.5 84 825.0 85 589.5 86 354.0 87 258.0 88 162.0 89 162.0 90 100.5 91 39.0 92 25.0 93 11.0 94 8.0 95 5.0 96 5.0 97 3.5 98 2.0 99 1.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 1722211.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 65.85539087025037 #Duplication Level Percentage of deduplicated Percentage of total 1 83.64947416802818 55.08768817426408 2 8.822962642336615 11.620793068893898 3 2.9325140410407897 5.793655752157161 4 1.3986892678009526 3.6844491374822415 5 0.7990977911639207 2.6312448690326846 6 0.5314468572503511 2.0999184306592817 7 0.3827204193678821 1.7642941968048613 8 0.2755560457874563 1.4517480881594835 9 0.2050715011509908 1.2154557478182746 >10 0.9511129011200022 10.338299040353213 >50 0.03300961055580665 1.4858655592302084 >100 0.01711022296787603 2.1688084153881815 >500 8.818081636599761E-4 0.3784540593495722 >1k 3.527232654639903E-4 0.2793254604068501 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 5.806489448737698E-5 0.0 0.0 0.0 0.0 7 5.806489448737698E-5 0.0 0.0 0.0 0.0 8 5.806489448737698E-5 0.0 0.0 5.806489448737698E-5 0.0 9 5.806489448737698E-5 0.0 0.0 2.3225957794950793E-4 0.0 10 5.806489448737698E-5 0.0 0.0 2.903244724368849E-4 0.0 11 5.806489448737698E-5 0.0 0.0 2.903244724368849E-4 0.0 12 5.806489448737698E-5 0.0 0.0 3.483893669242619E-4 0.0 13 5.806489448737698E-5 5.806489448737698E-5 0.0 3.483893669242619E-4 0.0 14 5.806489448737698E-5 5.806489448737698E-5 0.0 5.225840503863928E-4 0.0 15 5.806489448737698E-5 5.806489448737698E-5 0.0 5.225840503863928E-4 0.0 16 5.806489448737698E-5 5.806489448737698E-5 0.0 6.387138393611468E-4 5.806489448737698E-5 17 5.806489448737698E-5 5.806489448737698E-5 0.0 6.387138393611468E-4 5.806489448737698E-5 18 1.1612978897475396E-4 5.806489448737698E-5 0.0 8.129085228232777E-4 5.806489448737698E-5 19 1.1612978897475396E-4 5.806489448737698E-5 0.0 0.0011032329952601627 5.806489448737698E-5 20 1.1612978897475396E-4 5.806489448737698E-5 0.0 0.0013935574676970477 5.806489448737698E-5 21 1.1612978897475396E-4 5.806489448737698E-5 0.0 0.0017419468346213094 1.1612978897475396E-4 22 1.1612978897475396E-4 5.806489448737698E-5 5.806489448737698E-5 0.0025548553574445874 1.1612978897475396E-4 23 1.1612978897475396E-4 5.806489448737698E-5 5.806489448737698E-5 0.003019374513343603 2.3225957794950793E-4 24 1.1612978897475396E-4 5.806489448737698E-5 5.806489448737698E-5 0.004819386242452289 2.3225957794950793E-4 25 1.1612978897475396E-4 5.806489448737698E-5 5.806489448737698E-5 0.006329073499124091 2.3225957794950793E-4 26 1.1612978897475396E-4 5.806489448737698E-5 5.806489448737698E-5 0.009987161851828841 2.3225957794950793E-4 27 1.1612978897475396E-4 5.806489448737698E-5 5.806489448737698E-5 0.025606618468933248 2.3225957794950793E-4 28 1.7419468346213096E-4 5.806489448737698E-5 5.806489448737698E-5 0.07496177878320369 2.3225957794950793E-4 29 1.7419468346213096E-4 5.806489448737698E-5 5.806489448737698E-5 0.14667192347511426 2.3225957794950793E-4 30 1.7419468346213096E-4 5.806489448737698E-5 5.806489448737698E-5 0.241666090856463 2.3225957794950793E-4 31 1.7419468346213096E-4 5.806489448737698E-5 5.806489448737698E-5 0.6869657666801571 2.3225957794950793E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CTTATAC 1205 0.0 21.954357 37 TCTTATA 2335 0.0 17.192719 37 TAAGACT 145 2.9831426E-9 16.586206 4 TATACCG 80 3.3837903E-4 16.1875 5 GTACTTA 595 0.0 16.168068 30 ATACTTA 115 1.2429991E-6 16.086956 6 TTAGTAC 70 0.0025931979 15.857142 3 ATACCGT 70 0.0025931979 15.857142 6 TACTTAC 585 0.0 15.811965 31 TATAGGG 95 7.062941E-5 15.578948 2 CGACTTA 285 0.0 15.578947 19 TAAGGTA 75 0.004105511 14.8 4 GTATTAG 135 6.5710465E-6 13.703704 1 GCTTATA 325 0.0 13.661538 1 TAACGAA 95 0.0012455145 13.631579 16 TACCGTC 95 0.0012455145 13.631579 7 TACGGAT 1110 0.0 13.5 27 GCGACTT 330 0.0 13.454545 18 GTCTTAA 220 2.8376235E-10 13.454545 1 GTGTAAG 305 0.0 13.344262 1 >>END_MODULE