##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2727506.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2604447 Sequences flagged as poor quality 0 Sequence length 43 %GC 51 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.606676196520795 34.0 31.0 34.0 31.0 34.0 2 32.78297888188932 34.0 31.0 34.0 31.0 34.0 3 32.878721279411714 34.0 31.0 34.0 31.0 34.0 4 36.330290844851135 37.0 37.0 37.0 35.0 37.0 5 36.19162225224779 37.0 35.0 37.0 35.0 37.0 6 36.20890845542259 37.0 36.0 37.0 35.0 37.0 7 36.18418228514537 37.0 36.0 37.0 35.0 37.0 8 36.17149437097395 37.0 36.0 37.0 35.0 37.0 9 37.89275727246513 39.0 38.0 39.0 35.0 39.0 10 37.86668455914058 39.0 38.0 39.0 35.0 39.0 11 37.94153039013656 39.0 38.0 39.0 35.0 39.0 12 37.914628326089954 39.0 38.0 39.0 35.0 39.0 13 37.94602501029969 39.0 38.0 39.0 35.0 39.0 14 39.31451897466142 40.0 39.0 41.0 36.0 41.0 15 39.331474973382065 40.0 39.0 41.0 36.0 41.0 16 39.32055864450304 40.0 39.0 41.0 36.0 41.0 17 39.330465162086234 40.0 39.0 41.0 36.0 41.0 18 39.30541877028022 40.0 39.0 41.0 36.0 41.0 19 39.33786673332189 40.0 39.0 41.0 36.0 41.0 20 39.31556756578268 40.0 39.0 41.0 36.0 41.0 21 39.296176501192 40.0 39.0 41.0 36.0 41.0 22 39.26470724879408 40.0 39.0 41.0 36.0 41.0 23 39.227519316000674 40.0 39.0 41.0 36.0 41.0 24 39.18689264938008 40.0 39.0 41.0 36.0 41.0 25 39.13228374391954 40.0 39.0 41.0 36.0 41.0 26 39.04308361813467 40.0 39.0 41.0 36.0 41.0 27 38.997186734842366 40.0 39.0 41.0 36.0 41.0 28 38.940833889113506 40.0 38.0 41.0 35.0 41.0 29 38.860153422204405 40.0 38.0 41.0 35.0 41.0 30 38.799882278272506 40.0 38.0 41.0 35.0 41.0 31 38.74303527773842 40.0 38.0 41.0 35.0 41.0 32 38.663377676719854 40.0 38.0 41.0 35.0 41.0 33 38.61783211560842 40.0 38.0 41.0 35.0 41.0 34 38.581048107333345 40.0 38.0 41.0 35.0 41.0 35 38.569580797766285 40.0 38.0 41.0 35.0 41.0 36 38.51893472971422 40.0 38.0 41.0 35.0 41.0 37 38.5007416161665 40.0 38.0 41.0 35.0 41.0 38 38.46209809606415 40.0 38.0 41.0 34.0 41.0 39 38.41818051970341 40.0 38.0 41.0 34.0 41.0 40 38.36154508039519 40.0 38.0 41.0 34.0 41.0 41 38.32356504087048 40.0 38.0 41.0 34.0 41.0 42 38.28461550571004 40.0 38.0 41.0 34.0 41.0 43 37.21839530618208 39.0 36.0 41.0 31.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 2.0 9 1.0 10 3.0 11 1.0 12 1.0 13 1.0 14 0.0 15 2.0 16 2.0 17 6.0 18 16.0 19 40.0 20 116.0 21 229.0 22 465.0 23 827.0 24 1519.0 25 2621.0 26 3968.0 27 6105.0 28 9098.0 29 12888.0 30 18443.0 31 25796.0 32 35566.0 33 48537.0 34 70220.0 35 103746.0 36 159343.0 37 278084.0 38 665929.0 39 1160872.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.45816981493576 16.588627067473443 11.924604340191987 28.028598777398813 2 18.34589070155776 19.07253248002359 35.53380045744836 27.047776360970293 3 20.103307919109124 20.93588389397058 28.890854757267086 30.069953429653207 4 15.312156476979567 14.270937362134841 32.98888401261381 37.428022148271786 5 16.38428426456749 34.62020920371964 33.24137523243898 15.754131299273896 6 37.513184180749306 32.54971208859308 14.672212565661733 15.26489116499587 7 31.198945495915254 29.0960422692418 20.159020321780403 19.545991913062544 8 27.919823286862815 34.39359679809188 18.821807470069462 18.864772444975845 9 28.207331537174685 14.109674721735555 17.58634366527712 40.09665007581264 10 17.158882480618725 25.83949682984526 32.37696908403204 24.62465160550397 11 37.9264004988391 20.387475729012724 20.27655006993807 21.409573702210103 12 22.760225107287653 23.117268272305022 29.29328183679683 24.829224783610492 13 32.10489597215839 18.551807735000942 23.04258831145345 26.300707981387216 14 23.576367651175087 18.635357141074476 24.040535284457697 33.747739923292734 15 26.580076307945603 25.87558894460129 21.141340177012623 26.40299457044048 16 26.06918090481396 24.602612377982737 23.230382495785094 26.097824221418215 17 25.588656632290846 24.51268925802675 24.051708481685363 25.846945627997037 18 25.74373753814149 24.42518507767676 24.441695300384303 25.389382083797447 19 26.775549665629594 24.15660598967842 24.183444700544875 24.884399644147106 20 26.002180117314733 23.80198176426704 24.234933557872363 25.960904560545867 21 25.682534526523288 24.250023133509725 24.589788158484318 25.477654181482674 22 26.40253382003934 23.627510945701715 23.696085963738174 26.273869270520766 23 25.786894492381684 23.813846087096415 24.229250969591625 26.170008450930276 24 25.61215490274903 23.769345277519566 24.27056492222725 26.347934897504153 25 26.203528042613268 23.448624602458796 23.917860490153956 26.42998686477398 26 25.778754568628198 23.813154961494707 24.29245056628144 26.115639903595657 27 26.211975133300854 24.106422591820838 23.88096206219593 25.800640212682385 28 25.910874746155326 24.434976023701 23.52902554745787 26.125123682685807 29 25.838844100110308 24.406601478164077 24.232322638932562 25.52223178279305 30 26.411249681794253 23.975147123362465 23.79576163385164 25.817841560991646 31 25.972308132974103 23.742698545986922 24.18732268308781 26.097670637951165 32 25.45373355649011 24.083615446964366 24.250522279777627 26.212128716767896 33 25.574450161589006 23.683492119440327 24.24725863110288 26.494799087867786 34 25.976262907250558 23.715898230987232 24.767177062923533 25.540661798838677 35 25.82778609048293 23.661260912585284 24.463427360971444 26.04752563596034 36 25.507257394755968 23.433842193755527 24.923755407577886 26.13514500391062 37 25.11535078271894 23.095382628250835 25.330367636584654 26.45889895244557 38 25.398021153818835 22.825114122114982 25.34660908822487 26.430255635841316 39 24.68639215925684 22.94479403881131 26.175537455743964 26.193276346187886 40 25.33881472727224 22.461274888680784 26.30316531685997 25.896745067187005 41 24.709045720646262 22.67606136734593 26.400690818434775 26.21420209357303 42 24.209285118875524 22.796202034443397 26.742797991281837 26.251714855399243 43 23.872438179774825 22.4027595877359 26.71046867146845 27.014333561020827 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 35.0 1 56.5 2 78.0 3 181.5 4 285.0 5 285.0 6 367.0 7 449.0 8 434.0 9 419.0 10 554.0 11 689.0 12 689.0 13 1185.5 14 1682.0 15 2390.5 16 3099.0 17 3025.5 18 2952.0 19 2952.0 20 3713.0 21 4474.0 22 5198.5 23 5923.0 24 7856.0 25 9789.0 26 9789.0 27 12699.0 28 15609.0 29 19231.5 30 22854.0 31 28792.5 32 34731.0 33 34731.0 34 43224.5 35 51718.0 36 61418.0 37 71118.0 38 83886.5 39 96655.0 40 96655.0 41 110785.5 42 124916.0 43 141719.5 44 158523.0 45 177562.5 46 196602.0 47 196602.0 48 215696.5 49 234791.0 50 247609.0 51 260427.0 52 262107.0 53 263787.0 54 263787.0 55 254553.0 56 245319.0 57 228595.5 58 211872.0 59 197406.0 60 182940.0 61 182940.0 62 160856.5 63 138773.0 64 117312.5 65 95852.0 66 80095.0 67 64338.0 68 64338.0 69 52809.5 70 41281.0 71 33693.0 72 26105.0 73 21001.0 74 15897.0 75 15897.0 76 12696.0 77 9495.0 78 7531.0 79 5567.0 80 4302.0 81 3037.0 82 3037.0 83 2203.5 84 1370.0 85 1008.0 86 646.0 87 450.0 88 254.0 89 254.0 90 159.5 91 65.0 92 42.5 93 20.0 94 13.5 95 7.0 96 7.0 97 5.0 98 3.0 99 2.0 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 2604447.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 63.61566977054748 #Duplication Level Percentage of deduplicated Percentage of total 1 81.9621137054362 52.140747591810936 2 9.7674337292001 12.427236772450012 3 3.1981521581580066 6.103577747080304 4 1.5341623494272403 3.9038706158228234 5 0.875894654774932 2.786031255597488 6 0.5582959449633152 2.130982228141321 7 0.39353805907615935 1.7524631045831809 8 0.2712571175978066 1.3804962572810102 9 0.227897561663275 1.3048070421855495 >10 1.1579724172816062 12.645542631832718 >50 0.04096359325401667 1.7582733303375075 >100 0.01147224634414764 1.2252615550875592 >500 6.650779325145449E-4 0.3015504768274118 >1k 1.8138489068189928E-4 0.1391593909622579 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 7.679173352346967E-5 2 0.0 0.0 0.0 0.0 7.679173352346967E-5 3 0.0 0.0 0.0 0.0 7.679173352346967E-5 4 0.0 0.0 0.0 0.0 7.679173352346967E-5 5 0.0 0.0 0.0 0.0 7.679173352346967E-5 6 0.0 0.0 0.0 0.0 1.151876002852045E-4 7 0.0 0.0 0.0 0.0 1.151876002852045E-4 8 0.0 0.0 0.0 0.0 1.5358346704693934E-4 9 0.0 0.0 0.0 0.0 3.071669340938787E-4 10 0.0 0.0 0.0 0.0 3.071669340938787E-4 11 0.0 0.0 0.0 0.0 3.071669340938787E-4 12 0.0 0.0 0.0 0.0 3.071669340938787E-4 13 0.0 0.0 0.0 0.0 3.071669340938787E-4 14 0.0 3.8395866761734835E-5 0.0 0.0 3.455628008556135E-4 15 0.0 3.8395866761734835E-5 0.0 0.0 4.991462679025528E-4 16 0.0 3.8395866761734835E-5 0.0 7.679173352346967E-5 5.375421346642877E-4 17 0.0 3.8395866761734835E-5 0.0 2.687710673321438E-4 5.375421346642877E-4 18 0.0 3.8395866761734835E-5 0.0 3.455628008556135E-4 5.759380014260225E-4 19 0.0 3.8395866761734835E-5 0.0 4.2235453437908314E-4 5.759380014260225E-4 20 0.0 3.8395866761734835E-5 0.0 4.60750401140818E-4 5.759380014260225E-4 21 0.0 3.8395866761734835E-5 0.0 9.598966690433708E-4 6.143338681877574E-4 22 0.0 3.8395866761734835E-5 0.0 0.0014974388037076584 6.143338681877574E-4 23 0.0 3.8395866761734835E-5 0.0 0.0019197933380867417 8.447090687581663E-4 24 0.0 3.8395866761734835E-5 0.0 0.0026109189397979684 8.831049355199011E-4 25 0.0 3.8395866761734835E-5 0.0 0.003225252807985726 8.831049355199011E-4 26 0.0 3.8395866761734835E-5 0.0 0.004569108144646445 9.21500802281636E-4 27 0.0 3.8395866761734835E-5 0.0 0.013054594698989843 9.21500802281636E-4 28 0.0 3.8395866761734835E-5 0.0 0.04592145664703486 9.21500802281636E-4 29 0.0 3.8395866761734835E-5 0.0 0.09549052063643453 9.21500802281636E-4 30 0.0 3.8395866761734835E-5 0.0 0.1593812429279613 9.21500802281636E-4 31 0.0 3.8395866761734835E-5 0.0 0.4481181609762072 9.598966690433708E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CTTATAC 1340 0.0 17.671642 37 TCTTATA 2340 0.0 15.732906 37 TACTTAC 490 0.0 15.479591 31 TTATACC 215 1.2732926E-11 14.627907 4 CTCTTAT 3805 0.0 14.197109 37 GTACTTA 525 0.0 14.095238 30 TACGGAT 830 0.0 14.042169 27 CGTATAC 80 0.0063014436 13.875001 3 CGTTACG 495 0.0 13.828283 24 TTTATAC 250 1.0913936E-11 13.32 3 TATACCG 125 4.8489863E-5 13.32 5 GTTCTAA 335 0.0 13.253732 1 TCGTTAC 660 0.0 13.174243 23 TAATACT 355 0.0 13.02817 4 CTCGTTA 690 0.0 12.869565 22 GTATTAA 260 2.3646862E-11 12.807693 1 ATTACTC 235 8.094503E-10 12.595745 3 ATTATAC 235 8.094503E-10 12.595745 3 TAAGACT 325 0.0 12.523077 4 TAGACAG 540 0.0 12.333334 5 >>END_MODULE