##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2727504.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1038976 Sequences flagged as poor quality 0 Sequence length 43 %GC 52 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.08424737433781 33.0 31.0 34.0 30.0 34.0 2 32.27517767494148 34.0 31.0 34.0 30.0 34.0 3 32.3607994794875 34.0 31.0 34.0 30.0 34.0 4 35.96729953338672 37.0 35.0 37.0 35.0 37.0 5 35.702363673463104 37.0 35.0 37.0 33.0 37.0 6 35.70483245041272 37.0 35.0 37.0 33.0 37.0 7 35.682360324011334 37.0 35.0 37.0 33.0 37.0 8 35.65867257761488 37.0 35.0 37.0 33.0 37.0 9 37.322838063631885 39.0 37.0 39.0 34.0 39.0 10 37.21206649624246 39.0 37.0 39.0 34.0 39.0 11 37.31944048755698 39.0 37.0 39.0 34.0 39.0 12 37.2760352500924 39.0 37.0 39.0 34.0 39.0 13 37.333207889306394 39.0 37.0 39.0 34.0 39.0 14 38.541549564186276 40.0 38.0 41.0 35.0 41.0 15 38.53639641339165 40.0 38.0 41.0 34.0 41.0 16 38.50959406184551 40.0 38.0 41.0 34.0 41.0 17 38.52483502987557 40.0 38.0 41.0 34.0 41.0 18 38.47190406708143 40.0 38.0 41.0 34.0 41.0 19 38.529344277442405 40.0 38.0 41.0 34.0 41.0 20 38.49504704632253 40.0 38.0 41.0 34.0 41.0 21 38.46634955956634 40.0 38.0 41.0 34.0 41.0 22 38.446435721325614 40.0 38.0 41.0 34.0 41.0 23 38.39419582358014 40.0 38.0 41.0 34.0 41.0 24 38.34303198533941 40.0 38.0 41.0 34.0 41.0 25 38.25671045336947 40.0 38.0 41.0 34.0 41.0 26 38.12412317512628 40.0 38.0 41.0 34.0 41.0 27 38.06750011549833 40.0 38.0 41.0 34.0 41.0 28 37.96160739035358 40.0 37.0 41.0 33.0 41.0 29 37.86496993193298 40.0 37.0 41.0 33.0 41.0 30 37.81611317297031 40.0 37.0 41.0 33.0 41.0 31 37.723781877540965 40.0 37.0 41.0 33.0 41.0 32 37.62394511519034 39.0 37.0 41.0 33.0 41.0 33 37.57209117438709 39.0 37.0 41.0 33.0 41.0 34 37.51912459960577 39.0 37.0 41.0 32.0 41.0 35 37.522597249599606 39.0 37.0 41.0 32.0 41.0 36 37.43967425619071 39.0 37.0 40.0 32.0 41.0 37 37.42143803129235 39.0 37.0 40.0 32.0 41.0 38 37.38726881082913 39.0 37.0 40.0 32.0 41.0 39 37.31418146328693 39.0 36.0 40.0 32.0 41.0 40 37.277941935136134 39.0 36.0 40.0 32.0 41.0 41 37.2171195484785 39.0 36.0 40.0 31.0 41.0 42 37.18987445330787 39.0 36.0 40.0 31.0 41.0 43 36.05520146759887 38.0 35.0 40.0 29.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 1.0 10 0.0 11 0.0 12 0.0 13 0.0 14 1.0 15 2.0 16 3.0 17 9.0 18 22.0 19 64.0 20 107.0 21 239.0 22 453.0 23 734.0 24 1264.0 25 2086.0 26 3219.0 27 4876.0 28 6851.0 29 9799.0 30 13454.0 31 18095.0 32 24044.0 33 32179.0 34 44936.0 35 63545.0 36 96760.0 37 164172.0 38 317128.0 39 234933.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.067693575212516 16.4906600344955 12.140992669705557 28.30065372058642 2 19.288318498213624 19.55598589380313 34.41272945669582 26.742966151287423 3 20.56034018110139 20.97969539238635 29.349956110632007 29.110008315880254 4 16.54186429715412 14.436714611309597 31.822294258962668 37.19912683257361 5 16.720309227547123 35.20581803622028 32.330679438216094 15.743193298016509 6 38.114162406061354 31.782254835530367 14.303891523962056 15.799691234446222 7 30.90427497844031 30.060655876555376 19.473500831588026 19.561568313416284 8 28.45089780707158 34.523607860046816 18.554134070469384 18.47136026241222 9 29.82263305408402 13.511091690279661 16.591528581988417 40.0747466736479 10 17.176912652457805 26.115040193421212 31.8374052913638 24.870641862757175 11 38.89579740051744 20.199889121596648 19.30015707773808 21.60415640014784 12 22.815541456203032 22.666163607244055 28.374476407539735 26.14381852901318 13 32.77400055439202 18.37848034988296 22.136026241222126 26.711492854502893 14 23.914026888012813 18.81689278674387 23.250103948503142 34.01897637674017 15 27.96310983121843 25.586924048293703 20.388728902303807 26.061237218184058 16 25.80232844647037 24.870353116915116 23.086000061599112 26.2413183750154 17 26.213598774177655 23.62325982505852 22.88253049156092 27.280610909202906 18 25.836881698903536 25.080945084390784 23.59332650609831 25.488846710607366 19 28.096414161636073 23.833274300850068 23.369163484045828 24.70114805346803 20 26.341320684982133 22.982244055685598 23.472726992731303 27.203708266600962 21 25.98837701737095 24.261965627694963 24.76871458051004 24.980942774424047 22 27.35934227547123 22.67877217568067 22.535361740790933 27.426523808057162 23 26.02081280029568 23.749056763582605 24.073799587285944 26.15633084883578 24 25.350056209190587 22.928633577676482 24.192474128372552 27.52883608476038 25 26.529294228163113 22.558557656769743 23.446836115559936 27.465311999507207 26 25.957673709498586 23.290624615005544 24.257634440064063 26.49406723543181 27 27.385136904028585 23.702183688554886 23.068867808303562 25.84381159911297 28 25.729083251201185 25.288168350375756 21.901660866083528 27.08108753233953 29 26.206572625354198 24.639452691881235 23.604876339780706 25.54909834298386 30 28.22018987926574 23.260787544659355 22.24767463348528 26.271347942589628 31 26.46644388320808 23.766189016878155 23.858395189109277 25.908971910804485 32 26.112633978070715 23.726630836515955 23.393033140322782 26.76770204509055 33 25.85362895774301 23.02199473327584 23.536924818282618 27.587451490698534 34 26.483672385117657 23.52883993470494 24.717702815079463 25.269784865097943 35 26.47019757915486 22.831422477516323 23.729037051866452 26.96934289146236 36 25.810894573118148 22.742585006775904 24.8596695207589 26.58685089934705 37 25.023484661820873 22.885995441665642 25.658148022668474 26.432371873845018 38 26.424671984723417 21.71031862141185 24.728771405691756 27.13623798817297 39 24.359850468153258 22.95962563139091 26.458166502402364 26.222357398053468 40 26.661732321054576 21.29981828261673 25.960753665147223 26.07769573118147 41 24.83801358260441 22.5159195207589 26.07519326721695 26.57087362941974 42 24.453692866822717 22.41052728840705 26.65326244302082 26.482517401749416 43 23.6723466182087 21.90021713687323 25.96758731674264 28.459848928175436 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 14.0 1 20.0 2 26.0 3 52.0 4 78.0 5 78.0 6 100.0 7 122.0 8 122.0 9 122.0 10 169.5 11 217.0 12 217.0 13 337.0 14 457.0 15 648.0 16 839.0 17 822.5 18 806.0 19 806.0 20 976.0 21 1146.0 22 1341.5 23 1537.0 24 2080.0 25 2623.0 26 2623.0 27 3424.0 28 4225.0 29 5254.0 30 6283.0 31 8212.0 32 10141.0 33 10141.0 34 12887.5 35 15634.0 36 18709.0 37 21784.0 38 26174.0 39 30564.0 40 30564.0 41 35877.5 42 41191.0 43 48131.5 44 55072.0 45 65874.5 46 76677.0 47 76677.0 48 88743.0 49 100809.0 50 109146.5 51 117484.0 52 117903.0 53 118322.0 54 118322.0 55 110848.0 56 103374.0 57 96141.5 58 88909.0 59 83331.5 60 77754.0 61 77754.0 62 67755.5 63 57757.0 64 48441.5 65 39126.0 66 32411.5 67 25697.0 68 25697.0 69 20915.5 70 16134.0 71 13109.5 72 10085.0 73 8119.5 74 6154.0 75 6154.0 76 4982.0 77 3810.0 78 2958.5 79 2107.0 80 1589.5 81 1072.0 82 1072.0 83 786.5 84 501.0 85 348.0 86 195.0 87 139.0 88 83.0 89 83.0 90 58.0 91 33.0 92 19.5 93 6.0 94 5.0 95 4.0 96 4.0 97 2.5 98 1.0 99 1.0 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 1038976.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 69.94748716977615 #Duplication Level Percentage of deduplicated Percentage of total 1 85.8946255714297 60.081132201103046 2 7.950578384437026 11.122459590754172 3 2.4859996449548736 5.216682848086472 4 1.178961611476261 3.2986160876957755 5 0.6934103878563352 2.425115710398526 6 0.43924417115899583 1.8434415615925692 7 0.29196053833813446 1.429533420664132 8 0.19515680110756758 1.0920582273252912 9 0.15267748054586794 0.9611465500436261 >10 0.6618242152260914 7.662301377559046 >50 0.03227219706261786 1.554943056427106 >100 0.02232436431745429 2.8331213111149296 >500 8.26827505048438E-4 0.3771773719263136 >1k 1.378045841747397E-4 0.10227068530892376 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTTCAAATCCCAGCAACCACATGGTGGCTCACAACCATCCGTA 1061 0.10211977947517557 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 9.624861401995812E-5 0.0 6 0.0 0.0 0.0 9.624861401995812E-5 9.624861401995812E-5 7 0.0 0.0 0.0 9.624861401995812E-5 9.624861401995812E-5 8 0.0 0.0 0.0 9.624861401995812E-5 9.624861401995812E-5 9 0.0 0.0 0.0 9.624861401995812E-5 9.624861401995812E-5 10 0.0 0.0 0.0 9.624861401995812E-5 9.624861401995812E-5 11 0.0 0.0 0.0 9.624861401995812E-5 9.624861401995812E-5 12 0.0 0.0 0.0 9.624861401995812E-5 9.624861401995812E-5 13 0.0 0.0 0.0 9.624861401995812E-5 9.624861401995812E-5 14 0.0 0.0 0.0 1.9249722803991624E-4 9.624861401995812E-5 15 0.0 0.0 0.0 2.8874584205987433E-4 9.624861401995812E-5 16 0.0 0.0 0.0 2.8874584205987433E-4 9.624861401995812E-5 17 0.0 0.0 0.0 4.8124307009979057E-4 9.624861401995812E-5 18 9.624861401995812E-5 0.0 0.0 5.774916841197487E-4 9.624861401995812E-5 19 9.624861401995812E-5 0.0 0.0 5.774916841197487E-4 9.624861401995812E-5 20 9.624861401995812E-5 0.0 0.0 7.69988912159665E-4 9.624861401995812E-5 21 9.624861401995812E-5 0.0 0.0 0.0011549833682394973 9.624861401995812E-5 22 9.624861401995812E-5 0.0 0.0 0.001732475052359246 9.624861401995812E-5 23 9.624861401995812E-5 0.0 0.0 0.0023099667364789946 1.9249722803991624E-4 24 9.624861401995812E-5 0.0 0.0 0.0037536959467783662 1.9249722803991624E-4 25 9.624861401995812E-5 0.0 0.0 0.004234939016878157 1.9249722803991624E-4 26 9.624861401995812E-5 0.0 0.0 0.00615991129727732 1.9249722803991624E-4 27 9.624861401995812E-5 0.0 0.0 0.015399778243193298 1.9249722803991624E-4 28 9.624861401995812E-5 0.0 0.0 0.04956803622027843 1.9249722803991624E-4 29 9.624861401995812E-5 0.0 0.0 0.10789469631637305 1.9249722803991624E-4 30 9.624861401995812E-5 0.0 0.0 0.18508608476037944 1.9249722803991624E-4 31 9.624861401995812E-5 0.0 0.0 0.5218599852162129 1.9249722803991624E-4 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGTATAT 25 0.005496103 29.6 2 CTTATAC 485 0.0 20.979382 37 GATATAT 55 5.142636E-4 20.181818 1 ATACCGA 55 5.142636E-4 20.181818 6 TCTTATA 1045 0.0 18.942585 37 TATACCG 50 0.0070344377 18.5 5 TACTTAC 440 0.0 17.65909 31 GGTATCA 800 0.0 17.575 1 GTCTAGA 95 3.6057136E-6 17.526316 1 GCTCTAT 75 2.0670252E-4 17.266666 1 GTGTAGA 175 7.2759576E-12 16.914286 1 TAAGATT 110 7.805811E-7 16.818182 4 TCGTTAC 535 0.0 16.252337 23 AGGGCGT 560 0.0 16.1875 10 GTACTTA 510 0.0 15.960784 30 GGGCGTC 535 0.0 15.560747 11 GGCGTCA 610 0.0 15.467213 12 GTCCTAT 85 5.363533E-4 15.235294 1 ACTGTCG 85 5.363533E-4 15.235294 8 CGTTACG 450 0.0 15.211111 24 >>END_MODULE