##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2727500.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1402262 Sequences flagged as poor quality 0 Sequence length 43 %GC 51 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.527964816845923 31.0 30.0 31.0 27.0 34.0 2 30.691580460712764 31.0 30.0 33.0 27.0 34.0 3 30.799446893661813 31.0 31.0 34.0 27.0 34.0 4 34.61111261661515 35.0 35.0 37.0 32.0 37.0 5 33.11257240087801 35.0 32.0 37.0 26.0 37.0 6 33.07008818608791 35.0 32.0 37.0 26.0 37.0 7 33.097509595211164 35.0 32.0 37.0 26.0 37.0 8 32.96383913990395 35.0 32.0 37.0 26.0 37.0 9 34.42398995337533 37.0 33.0 39.0 28.0 39.0 10 34.01051657964061 37.0 32.0 39.0 27.0 39.0 11 34.25065287371404 37.0 32.0 39.0 27.0 39.0 12 34.1793409505499 37.0 32.0 39.0 27.0 39.0 13 34.362969259667594 37.0 33.0 39.0 27.0 39.0 14 35.14541291142454 37.0 33.0 39.0 27.0 40.0 15 35.10328526338159 37.0 33.0 39.0 27.0 40.0 16 35.05281751912268 37.0 33.0 39.0 27.0 40.0 17 35.04663607799398 37.0 33.0 39.0 27.0 40.0 18 34.96300976565007 37.0 33.0 39.0 27.0 40.0 19 35.03183000038509 37.0 33.0 39.0 27.0 40.0 20 34.990010426011686 37.0 33.0 39.0 27.0 40.0 21 34.92339020810662 37.0 33.0 39.0 27.0 40.0 22 34.90631707911931 37.0 33.0 39.0 27.0 40.0 23 34.798268083995715 37.0 33.0 39.0 27.0 40.0 24 34.68365897385795 37.0 33.0 39.0 26.0 40.0 25 34.56434460892472 37.0 32.0 39.0 26.0 40.0 26 34.324324555610865 37.0 32.0 39.0 25.0 40.0 27 34.16970794330874 37.0 32.0 39.0 25.0 40.0 28 34.02194882268791 37.0 32.0 39.0 24.0 40.0 29 33.82068757478987 36.0 31.0 39.0 24.0 40.0 30 33.70387060335372 36.0 31.0 39.0 24.0 40.0 31 33.56747526496475 36.0 31.0 39.0 24.0 40.0 32 33.3949982242976 36.0 31.0 39.0 24.0 40.0 33 33.29756422123683 36.0 31.0 39.0 23.0 40.0 34 33.20624961669075 36.0 30.0 39.0 23.0 40.0 35 33.1910113801843 36.0 30.0 39.0 23.0 40.0 36 33.09143369783963 36.0 30.0 38.0 23.0 40.0 37 33.02090764778622 36.0 30.0 38.0 23.0 40.0 38 32.95924798646758 35.0 30.0 38.0 22.0 40.0 39 32.85526884419602 35.0 30.0 38.0 22.0 40.0 40 32.74869389600517 35.0 30.0 38.0 21.0 40.0 41 32.67684213078583 35.0 30.0 38.0 21.0 40.0 42 32.61260449188526 35.0 30.0 38.0 21.0 40.0 43 31.460809035686626 34.0 28.0 38.0 18.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 1.0 10 3.0 11 5.0 12 7.0 13 26.0 14 53.0 15 100.0 16 219.0 17 448.0 18 812.0 19 1378.0 20 2479.0 21 4202.0 22 6419.0 23 9915.0 24 14972.0 25 20802.0 26 28220.0 27 38187.0 28 49727.0 29 62983.0 30 78341.0 31 93813.0 32 111501.0 33 127668.0 34 143376.0 35 154566.0 36 155708.0 37 140808.0 38 110686.0 39 44837.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 41.51784759196213 19.05749424857837 12.990225792326967 26.434432367132533 2 19.75294203223078 21.455405623200228 33.97004268817097 24.82160965639802 3 21.528073926270554 23.095612660116295 28.66040725627593 26.715906157337216 4 17.17688991072995 15.840905622487094 32.66778961420904 34.31441485257391 5 16.32006001731488 35.68748208252096 32.59733202497108 15.39512587519308 6 36.53882084802982 33.761522454434335 14.42476512948365 15.27489156805219 7 30.38184019819406 30.065922060214138 20.26689734158096 19.28534040001084 8 27.718571850338954 35.19477815130125 18.683027850715487 18.403622147644306 9 28.571408196185878 14.422055222205266 17.543226586757683 39.46330999485117 10 16.935208969507837 26.96329216651382 32.31871076874364 23.7827880952347 11 37.84977415062235 21.123085414851147 20.04040614378768 20.98673429073882 12 22.469624078809808 23.894963993889874 29.152611994049614 24.482799933250703 13 32.04793398095363 19.201832467826982 23.12834548750519 25.6218880637142 14 23.352839911514394 19.331765390490506 24.403642115382144 32.911752582612955 15 26.684528283587518 26.54946079976495 21.219215809884314 25.546795106763216 16 25.571041645569803 25.463857681374808 23.623402759256116 25.341697913799276 17 25.46014938720439 25.164484240462908 24.058770757533186 25.316595614799514 18 25.35210966281622 25.25212834691377 24.72405299437623 24.671708995893777 19 26.73451894153874 24.72590714146144 24.476880925247922 24.062692991751895 20 25.672520541810307 24.34915871641676 24.415337504688853 25.56298323708408 21 25.393827972233435 24.977928518351064 24.98470328654702 24.64354022286848 22 26.080646840604683 24.280056080817992 23.78984811682838 25.849448961748944 23 25.646776422665663 24.405282322419065 24.477736685441094 25.47020456947418 24 25.283506220663472 24.23905090489509 24.505263638321512 25.972179236119924 25 25.848379261507475 24.00057906439738 24.207031211000512 25.94401046309463 26 25.544013886135403 24.244328092752994 24.719346313313775 25.49231170779783 27 26.28531615347203 24.718847119867757 23.993305102755404 25.002531623904805 28 25.63836144743279 25.262112215834133 23.592738019000727 25.506788317732347 29 25.758096561127665 25.08967653690965 24.422326212933104 24.729900689029584 30 26.453473031430647 24.539565359397887 23.754120128763383 25.252841480408083 31 25.74711430531527 24.51446306039813 24.46418714904918 25.274235485237423 32 25.477050651019567 24.703586063089496 24.249533967261467 25.569829318629473 33 25.554354321802915 24.253884081576764 24.18941681369102 26.002344782929292 34 25.76394425578102 24.4763817318019 24.882226003414484 24.8774480090026 35 25.83083617754742 24.230493302963353 24.45541560706915 25.48325491242008 36 25.540519532013278 24.056845297098544 24.867178886684513 25.53545628420367 37 24.868248586925983 24.048572948564534 25.481899958780886 25.601278505728605 38 25.7547448337044 23.449683440041873 25.04738772069699 25.748184005556734 39 24.615086196445457 23.931547742148044 25.864068198382327 25.589297863024168 40 25.74354863784371 23.150880505925425 25.961696173753552 25.143874682477314 41 24.873383148085022 23.46266246963834 25.94992947109741 25.714024911179223 42 24.441366877231214 23.567635720000972 26.389005763544905 25.601991639222916 43 24.265080277437452 23.11158685038887 26.093697183550578 26.5296356886231 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 32.0 1 56.5 2 81.0 3 161.0 4 241.0 5 241.0 6 342.5 7 444.0 8 447.0 9 450.0 10 559.5 11 669.0 12 669.0 13 1122.0 14 1575.0 15 2259.0 16 2943.0 17 2839.5 18 2736.0 19 2736.0 20 3243.0 21 3750.0 22 4055.5 23 4361.0 24 5567.5 25 6774.0 26 6774.0 27 8606.5 28 10439.0 29 12643.0 30 14847.0 31 18417.0 32 21987.0 33 21987.0 34 26523.0 35 31059.0 36 36691.0 37 42323.0 38 48907.0 39 55491.0 40 55491.0 41 63237.0 42 70983.0 43 79466.0 44 87949.0 45 98146.5 46 108344.0 47 108344.0 48 118786.5 49 129229.0 50 135811.5 51 142394.0 52 143445.0 53 144496.0 54 144496.0 55 136647.5 56 128799.0 57 117757.0 58 106715.0 59 99181.0 60 91647.0 61 91647.0 62 79544.0 63 67441.0 64 56593.0 65 45745.0 66 38101.0 67 30457.0 68 30457.0 69 24900.0 70 19343.0 71 15623.5 72 11904.0 73 9585.5 74 7267.0 75 7267.0 76 5780.0 77 4293.0 78 3417.5 79 2542.0 80 1977.0 81 1412.0 82 1412.0 83 1027.5 84 643.0 85 463.5 86 284.0 87 201.5 88 119.0 89 119.0 90 81.5 91 44.0 92 25.0 93 6.0 94 5.0 95 4.0 96 4.0 97 2.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 1402262.0 >>END_MODULE >>Sequence Duplication Levels pass #Total Deduplicated Percentage 72.92513990030356 #Duplication Level Percentage of deduplicated Percentage of total 1 86.99448753710753 63.440851741987814 2 7.338323352327099 10.702965142042364 3 2.2903155069175276 5.010647362733862 4 1.0960075454309124 3.197060143293504 5 0.6293616136488978 2.2948141861613336 6 0.3900270514966704 1.7065666377178552 7 0.28688984328261635 1.4645037370152671 8 0.19112603289865407 1.1150314150179494 9 0.13741802670563077 0.9019105940098595 >10 0.6159791354913987 7.168073526936827 >50 0.018903256908072635 0.9589483260854197 >100 0.010279989219544233 1.4497661262511559 >500 5.874057103332269E-4 0.3166341906416936 >1k 2.9370285516661343E-4 0.2722268701052487 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GTACGGAAGCAGTGGTATCAACGCAGAGTACGGAAGCAGTGGT 1438 0.10254859648196986 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 7.131334943113342E-5 0.0 4 0.0 0.0 0.0 1.4262669886226683E-4 0.0 5 0.0 0.0 0.0 1.4262669886226683E-4 0.0 6 0.0 0.0 0.0 1.4262669886226683E-4 0.0 7 0.0 0.0 0.0 1.4262669886226683E-4 0.0 8 0.0 0.0 0.0 1.4262669886226683E-4 7.131334943113342E-5 9 0.0 0.0 0.0 1.4262669886226683E-4 1.4262669886226683E-4 10 0.0 0.0 0.0 1.4262669886226683E-4 1.4262669886226683E-4 11 0.0 0.0 0.0 1.4262669886226683E-4 1.4262669886226683E-4 12 0.0 0.0 0.0 1.4262669886226683E-4 1.4262669886226683E-4 13 0.0 0.0 0.0 1.4262669886226683E-4 1.4262669886226683E-4 14 0.0 0.0 0.0 1.4262669886226683E-4 1.4262669886226683E-4 15 0.0 0.0 0.0 2.1394004829340023E-4 2.1394004829340023E-4 16 0.0 0.0 0.0 2.1394004829340023E-4 2.1394004829340023E-4 17 0.0 0.0 0.0 4.991934460179338E-4 2.1394004829340023E-4 18 0.0 0.0 0.0 5.705067954490673E-4 2.8525339772453366E-4 19 0.0 0.0 0.0 6.418201448802007E-4 2.8525339772453366E-4 20 0.0 0.0 0.0 9.270735426047343E-4 2.8525339772453366E-4 21 0.0 0.0 0.0 0.0010697002414670012 2.8525339772453366E-4 22 0.0 0.0 0.0 0.0014975803380538016 2.8525339772453366E-4 23 0.0 0.0 0.0 0.0016402070369160684 4.2788009658680046E-4 24 0.0 0.0 0.0 0.002638593928951936 4.991934460179338E-4 25 0.0 0.0 0.0 0.0030664740255387365 4.991934460179338E-4 26 0.0 0.0 0.0 0.004635367713023672 4.991934460179338E-4 27 0.0 0.0 0.0 0.010483062366376611 4.991934460179338E-4 28 0.0 0.0 0.0 0.03344596088320157 4.991934460179338E-4 29 0.0 0.0 0.0 0.06710586181469654 4.991934460179338E-4 30 0.0 0.0 0.0 0.119735113694873 4.991934460179338E-4 31 0.0 0.0 0.0 0.3460123714398593 4.991934460179338E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CTTATAC 755 0.0 20.092716 37 ACTATAC 115 6.407936E-8 17.695652 3 GTAGTGT 170 5.456968E-12 17.411764 6 GGGTATA 75 2.0676752E-4 17.266666 1 TACTTAC 270 0.0 17.12963 31 GTAATAC 100 5.879645E-6 16.650002 3 GTATTAT 135 2.2202585E-8 16.444445 1 CGTCTAA 80 3.3832298E-4 16.1875 10 TTAGTAC 95 7.0614435E-5 15.578948 3 GTACTTA 300 0.0 15.416667 30 TAGTACT 110 1.4522422E-5 15.136364 4 TAATACT 185 3.0559022E-10 15.0 4 CTAACAC 150 8.1041435E-8 14.8 3 TCTTATA 1235 0.0 14.680161 37 TCTACAC 205 9.276846E-11 14.439024 3 TTACATA 145 8.913212E-7 14.034483 34 CGTGCAA 80 0.0062995334 13.875 10 GTATCGA 120 3.301377E-5 13.874999 9 CTCTTAT 1990 0.0 13.386934 37 TATACTG 180 5.1599272E-8 13.361111 5 >>END_MODULE