##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2727499.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2975416 Sequences flagged as poor quality 0 Sequence length 43 %GC 51 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.38884411457087 33.0 31.0 34.0 31.0 34.0 2 32.56777808548452 34.0 31.0 34.0 31.0 34.0 3 32.656923603287744 34.0 31.0 34.0 31.0 34.0 4 36.18345065026202 37.0 35.0 37.0 35.0 37.0 5 35.99671776988495 37.0 35.0 37.0 35.0 37.0 6 36.01301297028718 37.0 35.0 37.0 35.0 37.0 7 35.994564793628854 37.0 35.0 37.0 35.0 37.0 8 35.97394045067984 37.0 35.0 37.0 35.0 37.0 9 37.66024582781029 39.0 37.0 39.0 35.0 39.0 10 37.60060173098484 39.0 37.0 39.0 35.0 39.0 11 37.68640721163024 39.0 37.0 39.0 35.0 39.0 12 37.657134330123924 39.0 37.0 39.0 35.0 39.0 13 37.69421721197977 39.0 37.0 39.0 35.0 39.0 14 39.00592219709782 40.0 38.0 41.0 36.0 41.0 15 39.01188640512789 40.0 38.0 41.0 36.0 41.0 16 38.99384791908089 40.0 38.0 41.0 36.0 41.0 17 39.00663335815899 40.0 38.0 41.0 36.0 41.0 18 38.97420595977167 40.0 38.0 41.0 36.0 41.0 19 39.019393590677744 40.0 38.0 41.0 36.0 41.0 20 38.99367584230239 40.0 38.0 41.0 36.0 41.0 21 38.9693266420561 40.0 38.0 41.0 36.0 41.0 22 38.946110056543354 40.0 38.0 41.0 36.0 41.0 23 38.903432998948716 40.0 38.0 41.0 35.0 41.0 24 38.86255266490467 40.0 38.0 41.0 35.0 41.0 25 38.800747525724134 40.0 38.0 41.0 35.0 41.0 26 38.693664012023866 40.0 38.0 41.0 35.0 41.0 27 38.651381857192405 40.0 38.0 41.0 35.0 41.0 28 38.571910280780905 40.0 38.0 41.0 35.0 41.0 29 38.49134978100541 40.0 38.0 41.0 34.0 41.0 30 38.43704745823777 40.0 38.0 41.0 34.0 41.0 31 38.365620807308964 40.0 38.0 41.0 34.0 41.0 32 38.27183593823519 40.0 38.0 41.0 34.0 41.0 33 38.22925869861559 40.0 38.0 41.0 34.0 41.0 34 38.18409560209396 40.0 38.0 41.0 34.0 41.0 35 38.17251302002813 40.0 38.0 41.0 34.0 41.0 36 38.10325446929102 40.0 38.0 41.0 34.0 41.0 37 38.08835873706399 40.0 38.0 41.0 34.0 41.0 38 38.05364459961229 40.0 38.0 41.0 33.0 41.0 39 38.00243260102117 40.0 38.0 41.0 33.0 41.0 40 37.950507424844126 40.0 37.0 41.0 33.0 41.0 41 37.89813256364824 40.0 37.0 41.0 33.0 41.0 42 37.85997487410164 40.0 37.0 41.0 33.0 41.0 43 36.777767209694375 39.0 35.0 40.0 31.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 1.0 10 1.0 11 1.0 12 0.0 13 0.0 14 3.0 15 2.0 16 11.0 17 15.0 18 34.0 19 75.0 20 159.0 21 370.0 22 756.0 23 1297.0 24 2238.0 25 3702.0 26 5823.0 27 8737.0 28 12829.0 29 18749.0 30 26382.0 31 36653.0 32 49805.0 33 68942.0 34 98920.0 35 142339.0 36 219734.0 37 385530.0 38 892640.0 39 999668.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.27741062090141 16.808372341884294 12.216308576683058 27.697908460531234 2 18.512974320229507 19.56902833082836 35.67726328015981 26.240734068782313 3 20.217542689828917 21.4904067195982 29.35115627529058 28.9408943152823 4 15.581182597660293 14.499854810218135 33.20369319785872 36.71526939426285 5 16.280177292855857 35.227006912646836 33.04200152180401 15.450814272693297 6 37.223668892013755 32.64669545367774 14.74462730589605 15.385008348412457 7 30.699908853081386 29.917833338262618 20.200637490690376 19.181620317965624 8 27.796785390681507 34.89048254092873 19.01589559241464 18.296836475975123 9 29.00838067685325 14.06495763953679 17.42821844071552 39.49844324289444 10 16.92522995103878 26.25767287666666 32.45428538395976 24.362811788334806 11 37.89886859518131 20.633249266657167 20.260158579506193 21.207723558655328 12 22.44768462628419 23.19063956098912 29.2550688710419 25.106606941684795 13 31.948540977127234 18.806882802270337 23.17867484748351 26.065901373118916 14 23.476717205258023 19.03444762009749 24.132860749555693 33.355974425088796 15 26.892138779921865 26.181616284916124 21.206480035060643 25.719764900101367 16 25.578036819053203 25.096557926689915 23.60738800893724 25.718017245319647 17 25.505273884391293 24.51270679461292 23.939240764988828 26.042778556006958 18 25.31030954999234 25.142635517184825 24.529544776259858 25.017510156562984 19 26.95209678243311 24.316835024077303 24.311188754782524 24.41987943870706 20 25.685383153145647 23.89215491211985 24.34123497352975 26.081226961204752 21 25.35642074923305 24.63746245903094 25.28070024494054 24.725416546795472 22 26.330435811328567 23.522223447074293 23.731337063456 26.41600367814114 23 25.472270096013467 24.06732369524127 24.74017078620267 25.720235422542597 24 24.955333976828786 23.800134166113242 24.78567702801894 26.45885482903903 25 25.881053271206444 23.485421870420808 24.21523578551705 26.418289072855693 26 25.323753048313247 23.968984505023837 24.828326526442016 25.878935920220904 27 26.302103638617258 24.4827277933573 23.94653386282792 25.268634705197524 28 25.454591895721475 25.10902677138256 23.237590978874888 26.198790354021085 29 25.51444907199531 25.024803254402073 24.417056304059667 25.043691369542948 30 26.91072441635052 23.92089038978079 23.579425532429752 25.58895966143894 31 25.85352770839439 24.066853172800037 24.543929319463228 25.535689799342343 32 25.387912144049775 24.370911496073155 24.288032328924764 25.953144030952313 33 25.32919766513321 23.697728317653734 24.379212856286316 26.59386116092674 34 25.883708362124825 24.092026123405937 25.157927496524856 24.866338017944383 35 25.860988849962492 23.793513243190194 24.409729597474772 25.935768309372538 36 25.310107897517526 23.66805179511033 25.177790265293996 25.84405004207815 37 24.71956862502588 23.6201593323421 25.762279963541236 25.897992079090788 38 25.70161617736814 22.844402261734157 25.233513565834155 26.220467995063544 39 24.266589949102915 23.562453115799606 26.409517190201303 25.761439744896176 40 25.800862803722236 22.492955606879843 26.23233188233175 25.473849707066172 41 24.53982905247535 23.196991613945748 26.30099455000578 25.96218478357312 42 24.313373323259672 23.26790606758853 26.677950242924016 25.740770366227782 43 23.794521505564266 22.812608388205213 26.233373753451616 27.159496352778906 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 86.0 1 120.5 2 155.0 3 329.5 4 504.0 5 504.0 6 623.0 7 742.0 8 693.0 9 644.0 10 886.0 11 1128.0 12 1128.0 13 1841.0 14 2554.0 15 3535.5 16 4517.0 17 4598.0 18 4679.0 19 4679.0 20 5770.5 21 6862.0 22 7664.0 23 8466.0 24 11092.0 25 13718.0 26 13718.0 27 17409.5 28 21101.0 29 25275.5 30 29450.0 31 36303.0 32 43156.0 33 43156.0 34 52469.0 35 61782.0 36 73002.5 37 84223.0 38 97874.5 39 111526.0 40 111526.0 41 127063.0 42 142600.0 43 160607.0 44 178614.0 45 202664.5 46 226715.0 47 226715.0 48 251639.5 49 276564.0 50 293498.5 51 310433.0 52 310804.5 53 311176.0 54 311176.0 55 290988.5 56 270801.0 57 251231.0 58 231661.0 59 216135.0 60 200609.0 61 200609.0 62 175674.0 63 150739.0 64 126331.5 65 101924.0 66 84978.5 67 68033.0 68 68033.0 69 55773.5 70 43514.0 71 35465.5 72 27417.0 73 22150.0 74 16883.0 75 16883.0 76 13669.5 77 10456.0 78 8240.0 79 6024.0 80 4702.5 81 3381.0 82 3381.0 83 2445.5 84 1510.0 85 1111.5 86 713.0 87 478.5 88 244.0 89 244.0 90 162.5 91 81.0 92 54.0 93 27.0 94 14.0 95 1.0 96 1.0 97 1.0 98 1.0 99 1.5 100 2.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 2975416.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 59.86482852351992 #Duplication Level Percentage of deduplicated Percentage of total 1 81.30791770683884 48.67484551124377 2 9.757113128018162 11.682158085867847 3 3.345704057884993 6.008699991471896 4 1.6248241745546903 3.890792823623453 5 0.9295357982992976 2.7823250585830324 6 0.6077095369934906 2.18282563345338 7 0.4462463406643959 1.870012246418562 8 0.3229628862348997 1.5467294243130674 9 0.23724320556352696 1.2782271437487658 >10 1.338580141463926 14.020757877911668 >50 0.05600536609314899 2.2630182170463593 >100 0.023914711618864798 2.612394701868482 >500 0.0016822093291023242 0.7060775363829359 >1k 5.607364427230469E-4 0.4811357480668903 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 3.360874580226765E-5 2 0.0 0.0 0.0 0.0 3.360874580226765E-5 3 0.0 0.0 0.0 0.0 3.360874580226765E-5 4 0.0 0.0 0.0 0.0 3.360874580226765E-5 5 0.0 0.0 0.0 0.0 3.360874580226765E-5 6 0.0 0.0 0.0 0.0 6.72174916045353E-5 7 0.0 0.0 0.0 3.360874580226765E-5 6.72174916045353E-5 8 0.0 0.0 0.0 3.360874580226765E-5 6.72174916045353E-5 9 0.0 0.0 0.0 1.0082623740680294E-4 1.0082623740680294E-4 10 0.0 0.0 0.0 1.0082623740680294E-4 1.0082623740680294E-4 11 0.0 0.0 0.0 1.0082623740680294E-4 1.0082623740680294E-4 12 0.0 0.0 0.0 1.0082623740680294E-4 1.0082623740680294E-4 13 0.0 3.360874580226765E-5 0.0 1.0082623740680294E-4 1.0082623740680294E-4 14 0.0 3.360874580226765E-5 0.0 1.0082623740680294E-4 2.0165247481360589E-4 15 0.0 3.360874580226765E-5 0.0 1.0082623740680294E-4 3.360874580226765E-4 16 0.0 3.360874580226765E-5 0.0 2.0165247481360589E-4 3.6969620382494415E-4 17 0.0 3.360874580226765E-5 0.0 2.3526122061587353E-4 3.6969620382494415E-4 18 0.0 3.360874580226765E-5 0.0 3.0247871222040886E-4 4.0330494962721177E-4 19 0.0 3.360874580226765E-5 0.0 4.0330494962721177E-4 4.0330494962721177E-4 20 0.0 3.360874580226765E-5 0.0 5.041311870340147E-4 4.0330494962721177E-4 21 0.0 3.360874580226765E-5 0.0 7.73001153452156E-4 4.0330494962721177E-4 22 0.0 3.360874580226765E-5 0.0 0.001243523594683903 4.0330494962721177E-4 23 0.0 3.360874580226765E-5 0.0 0.0016468285443111148 5.041311870340147E-4 24 0.0 3.360874580226765E-5 0.0 0.002755917155785947 5.041311870340147E-4 25 0.0 3.360874580226765E-5 0.0 0.0035961358008426386 5.041311870340147E-4 26 0.0 3.360874580226765E-5 0.0 0.005679878040583233 5.041311870340147E-4 27 0.0 3.360874580226765E-5 0.0 0.013645150795720666 5.041311870340147E-4 28 0.0 3.360874580226765E-5 0.0 0.04402745700097062 5.041311870340147E-4 29 0.0 3.360874580226765E-5 0.0 0.08845821895156845 5.041311870340147E-4 30 0.0 3.360874580226765E-5 0.0 0.14865148268342981 5.041311870340147E-4 31 0.0 3.360874580226765E-5 0.0 0.4351996493935638 5.041311870340147E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CTTATAC 1375 0.0 20.72 37 GTACTTA 1085 0.0 16.539171 30 TCTTATA 2465 0.0 16.436106 37 TACTTAC 1030 0.0 16.344662 31 CTTACAT 835 0.0 14.401197 33 CCTATAC 245 0.0 14.34694 3 AGTGTAC 1265 0.0 14.332016 27 ACTTACA 1015 0.0 14.216747 32 TAACGTT 80 0.006301723 13.875 4 TTACATA 765 0.0 13.784313 34 CGCGACA 110 2.4584177E-4 13.454545 28 TATACTG 330 0.0 13.454545 5 CTCTTAT 3960 0.0 13.22096 37 CTATACT 310 0.0 13.129032 4 GTAAGAC 325 0.0 13.092307 3 CCCTATA 170 3.7369318E-7 13.058824 2 ATTATAC 255 1.6370905E-11 13.058824 3 ACATATA 540 0.0 13.018518 36 GTCTTAG 400 0.0 12.950001 1 GTCCTAC 300 0.0 12.95 1 >>END_MODULE