##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2727497.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2567745 Sequences flagged as poor quality 0 Sequence length 43 %GC 51 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.714455290537025 34.0 31.0 34.0 31.0 34.0 2 32.89488208525379 34.0 31.0 34.0 31.0 34.0 3 32.985175708647084 34.0 31.0 34.0 31.0 34.0 4 36.41288173085723 37.0 37.0 37.0 35.0 37.0 5 36.279911361914834 37.0 37.0 37.0 35.0 37.0 6 36.2932553660897 37.0 37.0 37.0 35.0 37.0 7 36.2743146223632 37.0 37.0 37.0 35.0 37.0 8 36.26185972516741 37.0 37.0 37.0 35.0 37.0 9 37.99016491123535 39.0 38.0 39.0 35.0 39.0 10 37.984618410317225 39.0 38.0 39.0 35.0 39.0 11 38.04477469530658 39.0 38.0 39.0 35.0 39.0 12 38.03160010047727 39.0 38.0 39.0 35.0 39.0 13 38.05303992413577 39.0 38.0 39.0 35.0 39.0 14 39.45592338803113 40.0 39.0 41.0 37.0 41.0 15 39.469688773612646 40.0 39.0 41.0 37.0 41.0 16 39.462193870497266 40.0 39.0 41.0 37.0 41.0 17 39.473109284605755 40.0 39.0 41.0 37.0 41.0 18 39.44836773121941 40.0 39.0 41.0 37.0 41.0 19 39.48099636061992 40.0 39.0 41.0 37.0 41.0 20 39.45873947763504 40.0 39.0 41.0 37.0 41.0 21 39.44223121844264 40.0 39.0 41.0 37.0 41.0 22 39.41427205583109 40.0 39.0 41.0 37.0 41.0 23 39.377329135097135 40.0 39.0 41.0 37.0 41.0 24 39.34514720114342 40.0 39.0 41.0 36.0 41.0 25 39.29048289452418 40.0 39.0 41.0 36.0 41.0 26 39.207196197441725 40.0 39.0 41.0 36.0 41.0 27 39.16646123349476 40.0 39.0 41.0 36.0 41.0 28 39.10990733114075 40.0 39.0 41.0 36.0 41.0 29 39.0336563794302 40.0 39.0 41.0 36.0 41.0 30 38.98183503424211 40.0 38.0 41.0 35.0 41.0 31 38.92143495557386 40.0 38.0 41.0 35.0 41.0 32 38.846505786205405 40.0 38.0 41.0 35.0 41.0 33 38.807138169872786 40.0 38.0 41.0 35.0 41.0 34 38.76836835433425 40.0 38.0 41.0 35.0 41.0 35 38.762916488981574 40.0 38.0 41.0 35.0 41.0 36 38.71250533055268 40.0 38.0 41.0 35.0 41.0 37 38.696457397444064 40.0 38.0 41.0 35.0 41.0 38 38.6573121552179 40.0 38.0 41.0 35.0 41.0 39 38.61571651390617 40.0 38.0 41.0 35.0 41.0 40 38.56654379621029 40.0 38.0 41.0 35.0 41.0 41 38.52190384948661 40.0 38.0 41.0 35.0 41.0 42 38.4853157147614 40.0 38.0 41.0 35.0 41.0 43 37.46280023912032 39.0 37.0 41.0 32.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 1.0 10 1.0 11 0.0 12 3.0 13 3.0 14 2.0 15 4.0 16 2.0 17 10.0 18 32.0 19 42.0 20 83.0 21 170.0 22 361.0 23 695.0 24 1233.0 25 1983.0 26 3165.0 27 4822.0 28 7211.0 29 10442.0 30 15063.0 31 20897.0 32 29620.0 33 41429.0 34 61308.0 35 92958.0 36 146351.0 37 259543.0 38 634908.0 39 1235403.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.673223003063 16.478544403747257 11.894989572562697 27.95324302062705 2 18.348862523342465 19.231154183924026 35.71441089360509 26.705572399128418 3 20.054950939442975 21.175194577343152 29.19078802606957 29.579066457144304 4 15.35537991506166 14.338768063028065 33.030966860026986 37.27488516188329 5 16.316923993620865 34.94135905239811 33.14250441535277 15.599212538628251 6 37.361614957871595 32.59299502092303 14.707807823596191 15.337582197609187 7 30.97355851145655 29.660266108978888 20.062350428099364 19.303824951465195 8 27.886608678042407 34.682299060070214 18.873992549883265 18.557099712004113 9 28.751219455202907 14.022303616597442 17.39545788230529 39.83101904589436 10 16.97785410934497 26.126348216041702 32.405398511144995 24.490399163468336 11 38.02437547342123 20.513952904201936 20.140084003668587 21.321587618708243 12 22.582772043174067 23.153856788738757 29.316579333228184 24.946791834858992 13 32.038189150402395 18.73055930398073 23.068490056450308 26.162761489166563 14 23.508448074088353 18.852534032779737 24.116919709706377 33.522098183425534 15 26.783228085343364 26.049081976598142 21.117634344531876 26.050055593526615 16 25.71676704657199 24.920387343758822 23.424249682114073 25.938595927555113 17 25.559781053025127 24.49195695055389 23.945718909003816 26.00254308741717 18 25.44493320014254 24.867695195589903 24.467149191216418 25.22022241305114 19 26.94757462286948 24.275852937110187 24.17654401040602 24.600028429614312 20 25.87889373750119 23.826353473573118 24.276709720007243 26.018043068918452 21 25.5135926659384 24.549750851428005 24.926229045329656 25.01042743730394 22 26.420341583763186 23.576094978278604 23.665200399572388 26.338363038385822 23 25.65422189508693 23.996931159441456 24.495968252299196 25.852878693172414 24 25.27112310607167 23.771753036224393 24.532186802038364 26.424937055665577 25 25.96464991656103 23.368519849128322 24.139858124541185 26.526972109769464 26 25.534544902239126 23.885276770084257 24.643841191395563 25.936337136281058 27 26.27020985339276 24.2411142851023 24.00203291214665 25.48664294935829 28 25.635917896831657 24.91657076539921 23.30523474877762 26.142276588991507 29 25.641370151631097 24.776837263824874 24.325663179170828 25.256129405373194 30 26.676363891274253 23.986104539196845 23.701380004634416 25.636151564894487 31 25.911957768392114 24.0465466781164 24.37189051093469 25.669605042556796 32 25.39629129839606 24.317874243743052 24.24773488021591 26.038099577644974 33 25.428810103807038 23.66679713133508 24.349769934319802 26.554622830538076 34 25.881580920223772 23.91436844390701 25.018216372731715 25.1858342631375 35 25.76603206315269 23.722488019643695 24.46601979557939 26.045460121624224 36 25.379077751100677 23.600708014230385 25.113280329627745 25.906933905041196 37 24.81839123433207 23.423899180019824 25.536803693513182 26.220905892134926 38 25.541554944124123 22.82703305818919 25.277626867153863 26.35378513053282 39 24.361297558752916 23.305156859423345 26.413993601389546 25.919551980434196 40 25.685689194215154 22.418659173710783 26.240339286027236 25.65531234604682 41 24.518828777779724 22.993755221020777 26.440631760552545 26.046784240646947 42 24.15013951930585 23.010384598159085 26.864544571209372 25.974931311325694 43 23.737131218247917 22.61673180163918 26.48448346701094 27.161653513101964 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 29.0 1 70.0 2 111.0 3 267.0 4 423.0 5 423.0 6 552.5 7 682.0 8 591.5 9 501.0 10 731.5 11 962.0 12 962.0 13 1660.0 14 2358.0 15 3368.5 16 4379.0 17 4060.0 18 3741.0 19 3741.0 20 4533.5 21 5326.0 22 5787.5 23 6249.0 24 8184.0 25 10119.0 26 10119.0 27 12975.5 28 15832.0 29 19330.0 30 22828.0 31 28792.5 32 34757.0 33 34757.0 34 42484.5 35 50212.0 36 59982.5 37 69753.0 38 82054.0 39 94355.0 40 94355.0 41 108122.0 42 121889.0 43 137938.5 44 153988.0 45 174900.0 46 195812.0 47 195812.0 48 217360.0 49 238908.0 50 253183.5 51 267459.0 52 268423.0 53 269387.0 54 269387.0 55 254638.5 56 239890.0 57 222722.5 58 205555.0 59 190701.0 60 175847.0 61 175847.0 62 153979.0 63 132111.0 64 110995.5 65 89880.0 66 74796.0 67 59712.0 68 59712.0 69 48980.5 70 38249.0 71 30994.5 72 23740.0 73 19121.0 74 14502.0 75 14502.0 76 11535.5 77 8569.0 78 6802.0 79 5035.0 80 3836.0 81 2637.0 82 2637.0 83 1894.0 84 1151.0 85 834.0 86 517.0 87 353.0 88 189.0 89 189.0 90 130.0 91 71.0 92 43.0 93 15.0 94 13.0 95 11.0 96 11.0 97 6.5 98 2.0 99 2.0 100 2.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 2567745.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 62.77601080970252 #Duplication Level Percentage of deduplicated Percentage of total 1 81.89134657327584 51.408120577050596 2 9.748963465787016 12.240020718232811 3 3.221991376916866 6.067912965183045 4 1.5611683826170528 3.9201569305173565 5 0.8734773786938974 2.7416712683459363 6 0.5807833856626953 2.1875558457874194 7 0.4008795995517533 1.7615935452395057 8 0.2884797680039778 1.4487687227678547 9 0.22627574005598966 1.2784219473355423 >10 1.1459924818533167 12.380276136948362 >50 0.041779389337086734 1.7857110929303657 >100 0.0172481069740546 1.945039602553556 >500 0.0013038991030393005 0.552511693259412 >1k 3.1045216738083317E-4 0.2822389538481469 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 3.894467713889035E-5 2 0.0 0.0 0.0 0.0 3.894467713889035E-5 3 0.0 0.0 0.0 0.0 3.894467713889035E-5 4 0.0 0.0 0.0 3.894467713889035E-5 3.894467713889035E-5 5 0.0 0.0 0.0 7.78893542777807E-5 7.78893542777807E-5 6 0.0 0.0 0.0 7.78893542777807E-5 1.1683403141667105E-4 7 0.0 0.0 0.0 7.78893542777807E-5 1.1683403141667105E-4 8 0.0 0.0 0.0 7.78893542777807E-5 1.1683403141667105E-4 9 0.0 0.0 0.0 7.78893542777807E-5 1.557787085555614E-4 10 0.0 0.0 0.0 7.78893542777807E-5 1.557787085555614E-4 11 0.0 0.0 0.0 7.78893542777807E-5 1.557787085555614E-4 12 0.0 0.0 0.0 1.1683403141667105E-4 1.557787085555614E-4 13 0.0 0.0 0.0 1.1683403141667105E-4 1.9472338569445174E-4 14 0.0 0.0 0.0 1.557787085555614E-4 2.336680628333421E-4 15 0.0 0.0 0.0 1.9472338569445174E-4 3.115574171111228E-4 16 0.0 0.0 0.0 3.5050209425001316E-4 3.5050209425001316E-4 17 0.0 0.0 0.0 3.894467713889035E-4 3.5050209425001316E-4 18 0.0 0.0 0.0 4.673361256666842E-4 3.5050209425001316E-4 19 0.0 0.0 0.0 6.231148342222456E-4 3.5050209425001316E-4 20 0.0 0.0 0.0 7.399488656389166E-4 3.5050209425001316E-4 21 0.0 0.0 0.0 0.0013241190227222719 3.5050209425001316E-4 22 3.894467713889035E-5 0.0 0.0 0.0018693445026667368 3.5050209425001316E-4 23 3.894467713889035E-5 0.0 0.0 0.0024145699826112017 3.894467713889035E-4 24 3.894467713889035E-5 0.0 0.0 0.0031934635253890085 3.894467713889035E-4 25 3.894467713889035E-5 0.0 0.0 0.004128135776722377 3.894467713889035E-4 26 3.894467713889035E-5 0.0 0.0 0.006270093019361346 4.283914485277938E-4 27 3.894467713889035E-5 0.0 0.0 0.015188424084167236 4.673361256666842E-4 28 3.894467713889035E-5 0.0 0.0 0.04646099982669619 4.673361256666842E-4 29 3.894467713889035E-5 0.0 0.0 0.0988805352556426 4.673361256666842E-4 30 3.894467713889035E-5 0.0 0.0 0.16524226510031176 4.673361256666842E-4 31 3.894467713889035E-5 0.0 0.0 0.4736451633631844 5.062808028055745E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CTTATAC 1410 0.0 18.762411 37 TCTTATA 2520 0.0 16.738094 37 CCTATAC 190 1.8189894E-12 16.552631 3 CGTATAC 115 1.2435794E-6 16.086956 3 TATACTG 270 0.0 15.074075 5 ACGTATA 75 0.00410624 14.8 2 TATACAG 385 0.0 13.935066 5 CGTTACG 585 0.0 13.914529 24 TCGTTAC 840 0.0 13.875 23 GTAAGAC 160 1.785902E-7 13.875 3 CTCGTTA 890 0.0 13.511235 22 TACTTAC 665 0.0 13.353383 31 ATCTCGT 970 0.0 13.350515 20 CGTGTTA 85 0.009408861 13.058824 10 TATCGCT 85 0.009408861 13.058824 7 TACACTA 200 1.4648322E-8 12.949999 5 TACGGAT 1305 0.0 12.900384 27 TACTCCG 130 7.004372E-5 12.807693 5 TCCTATA 190 1.0474287E-7 12.657895 2 GGTATCA 2715 0.0 12.605893 1 >>END_MODULE