##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2727494.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2603268 Sequences flagged as poor quality 0 Sequence length 43 %GC 51 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.68639187359888 34.0 31.0 34.0 31.0 34.0 2 32.85686606219567 34.0 31.0 34.0 31.0 34.0 3 32.948923045956086 34.0 31.0 34.0 31.0 34.0 4 36.373585047716944 37.0 37.0 37.0 35.0 37.0 5 36.23850060769771 37.0 37.0 37.0 35.0 37.0 6 36.26217969106523 37.0 37.0 37.0 35.0 37.0 7 36.23837230742282 37.0 36.0 37.0 35.0 37.0 8 36.23108915409401 37.0 36.0 37.0 35.0 37.0 9 37.96029375385093 39.0 38.0 39.0 35.0 39.0 10 37.94173861469507 39.0 38.0 39.0 35.0 39.0 11 38.01375617108957 39.0 38.0 39.0 35.0 39.0 12 37.9933034170896 39.0 38.0 39.0 35.0 39.0 13 38.017811074388035 39.0 38.0 39.0 35.0 39.0 14 39.39901577555595 40.0 39.0 41.0 37.0 41.0 15 39.422134025386555 40.0 39.0 41.0 37.0 41.0 16 39.40618176845411 40.0 39.0 41.0 37.0 41.0 17 39.42155513761933 40.0 39.0 41.0 37.0 41.0 18 39.39360334779208 40.0 39.0 41.0 37.0 41.0 19 39.43267193389232 40.0 39.0 41.0 37.0 41.0 20 39.407276546248795 40.0 39.0 41.0 37.0 41.0 21 39.386003669234206 40.0 39.0 41.0 37.0 41.0 22 39.3606897176933 40.0 39.0 41.0 37.0 41.0 23 39.32142791291561 40.0 39.0 41.0 36.0 41.0 24 39.284130562047395 40.0 39.0 41.0 36.0 41.0 25 39.22723745691953 40.0 39.0 41.0 36.0 41.0 26 39.137073094279955 40.0 39.0 41.0 36.0 41.0 27 39.0965113849208 40.0 39.0 41.0 36.0 41.0 28 39.0275069643233 40.0 39.0 41.0 36.0 41.0 29 38.9528104674586 40.0 38.0 41.0 35.0 41.0 30 38.89894586343012 40.0 38.0 41.0 35.0 41.0 31 38.83229963261562 40.0 38.0 41.0 35.0 41.0 32 38.74738290487188 40.0 38.0 41.0 35.0 41.0 33 38.70330907152087 40.0 38.0 41.0 35.0 41.0 34 38.65844315683211 40.0 38.0 41.0 35.0 41.0 35 38.64955240874163 40.0 38.0 41.0 35.0 41.0 36 38.5814387915497 40.0 38.0 41.0 35.0 41.0 37 38.5707065119688 40.0 38.0 41.0 35.0 41.0 38 38.532102342133044 40.0 38.0 41.0 35.0 41.0 39 38.47979693216373 40.0 38.0 41.0 35.0 41.0 40 38.428630859365995 40.0 38.0 41.0 34.0 41.0 41 38.37637308183406 40.0 38.0 41.0 34.0 41.0 42 38.34056424463405 40.0 38.0 41.0 34.0 41.0 43 37.26246356502673 39.0 36.0 41.0 32.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 2.0 10 3.0 11 1.0 12 2.0 13 1.0 14 2.0 15 2.0 16 7.0 17 13.0 18 23.0 19 50.0 20 97.0 21 202.0 22 453.0 23 827.0 24 1447.0 25 2312.0 26 3607.0 27 5611.0 28 8171.0 29 12029.0 30 16714.0 31 23472.0 32 32611.0 33 45454.0 34 66083.0 35 98446.0 36 153567.0 37 269745.0 38 650195.0 39 1212119.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 43.88572363659831 16.543129635519662 11.956971007210937 27.614175720671096 2 18.705565466175592 19.564946828371106 35.084055886677824 26.645431818775478 3 20.360370119403765 21.190250101026862 29.286535231870097 29.162844547699272 4 15.703300620604562 14.30855371018274 32.86634338070456 37.121802288508135 5 16.432653111396906 34.99874004520472 32.924577876730325 15.64402896666805 6 37.47666394700814 32.235712957713154 14.635834650908011 15.65178844437069 7 30.750272349984716 29.64147371688201 20.147522268164476 19.4607316649688 8 27.999806397189992 34.085656951185975 19.096573998528005 18.817962653096032 9 28.777175457924425 13.867723184858416 17.537879311695914 39.81722204552124 10 17.19688483859518 25.967553090961054 32.44510361591661 24.390458454527156 11 37.790845967453215 20.47776102959818 20.16626793706987 21.565125065878735 12 22.519348757023863 23.151592536765328 29.113137794495223 25.215920911715585 13 32.225687097909244 18.724426374848843 22.927643254555427 26.122243272686486 14 23.560347993368335 19.126613164683775 23.97167713812024 33.34136170382765 15 27.01665752431175 26.066812944345337 21.14365482155506 25.772874709787853 16 25.722361278208773 24.915068291086435 23.580015580416617 25.782554850288175 17 25.575238507906217 24.341712032721947 23.943059262434755 26.13999019693708 18 25.434146618788382 24.793490335993067 24.58966959990289 25.182693445315657 19 26.870226192616357 24.214756221795067 24.42798820559389 24.487029379994684 20 25.7801348151631 23.64232188157347 24.380931967050646 26.19661133621279 21 25.38908786955473 24.538733622508325 25.18184835368468 24.890330154252272 22 26.430932197530183 23.506838327824873 23.66379489165157 26.398434582993374 23 25.543278678952763 23.96395607367355 24.632308314011468 25.86045693336222 24 25.156111472195718 23.776192078572013 24.647904095928656 26.419792353303617 25 25.989294993830832 23.271672374876502 24.128326395899307 26.610706235393362 26 25.42949861481799 23.833811962502516 24.73644665090187 26.000242771777625 27 26.439959312679296 24.183372591680918 23.968488837876084 25.408179257763702 28 25.532599793797644 24.997464725107058 23.241671621976685 26.228263859118616 29 25.61826135457433 24.769635704045836 24.455760989648397 25.156341951731438 30 26.83991813366891 23.87184108589665 23.611091904483132 25.677148875951307 31 25.85112251216548 23.9869656139898 24.557479291413713 25.60443258243101 32 25.40729575287677 24.134895062667386 24.32984233663226 26.12796684782358 33 25.37664197462574 23.61616245426902 24.33345318269191 26.673742388413334 34 25.927872197560912 23.94006302847037 25.042292994804992 25.089771779163726 35 25.866987186874347 23.6316814096743 24.477003520190777 26.02432788326058 36 25.367883752268305 23.51893850345028 25.152846345439656 25.960331398841763 37 24.778163446867552 23.387488341576816 25.745293992013117 26.08905421954251 38 25.610886009431223 22.700390432333514 25.322594523498925 26.36612903473634 39 24.211375855271143 23.29007232447831 26.54332938445062 25.955222435799925 40 25.685715032028973 22.31564326070155 26.3877172845823 25.610924422687177 41 24.468245297833338 22.993867707819557 26.46669493882305 26.071192055524055 42 24.118415775863262 23.095048224001523 26.878907588461885 25.90762841167333 43 23.694064537343063 22.760161458597423 26.363977892402936 27.18179611165658 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 81.0 1 115.0 2 149.0 3 345.0 4 541.0 5 541.0 6 705.0 7 869.0 8 767.5 9 666.0 10 1000.5 11 1335.0 12 1335.0 13 2175.0 14 3015.0 15 4081.5 16 5148.0 17 4915.5 18 4683.0 19 4683.0 20 5666.5 21 6650.0 22 6848.5 23 7047.0 24 9095.0 25 11143.0 26 11143.0 27 13926.0 28 16709.0 29 20155.0 30 23601.0 31 29645.0 32 35689.0 33 35689.0 34 43160.5 35 50632.0 36 59994.5 37 69357.0 38 81110.0 39 92863.0 40 92863.0 41 106561.0 42 120259.0 43 136494.0 44 152729.0 45 173733.0 46 194737.0 47 194737.0 48 217498.5 49 240260.0 50 255703.5 51 271147.0 52 273096.5 53 275046.0 54 275046.0 55 259318.0 56 243590.0 57 225075.5 58 206561.0 59 193508.0 60 180455.0 61 180455.0 62 157975.0 63 135495.0 64 113630.5 65 91766.0 66 76688.0 67 61610.0 68 61610.0 69 50480.5 70 39351.0 71 31904.5 72 24458.0 73 19724.5 74 14991.0 75 14991.0 76 12184.5 77 9378.0 78 7471.5 79 5565.0 80 4340.5 81 3116.0 82 3116.0 83 2265.0 84 1414.0 85 1068.5 86 723.0 87 509.0 88 295.0 89 295.0 90 194.5 91 94.0 92 60.0 93 26.0 94 20.5 95 15.0 96 15.0 97 10.5 98 6.0 99 4.5 100 3.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 2603268.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 60.36223106264737 #Duplication Level Percentage of deduplicated Percentage of total 1 81.51190073256238 49.20240186374506 2 9.656347589013805 11.657573687785781 3 3.2352729326076655 5.858648769263781 4 1.6140637010436345 3.897139442889106 5 0.964784459971744 2.9118271249232937 6 0.6299025993709394 2.2813395750114505 7 0.4272982352809129 1.805487236748155 8 0.3207679105259629 1.5489813386120617 9 0.24447676722140357 1.3281446801220675 >10 1.3201208249219019 13.785653569983047 >50 0.05032852607634678 2.022512215518004 >100 0.022764475620655013 2.569167671847404 >500 0.001335360046287278 0.5721057954161457 >1k 6.358857363173801E-4 0.5590170281346366 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences pass >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 3.8413255953670544E-5 2 0.0 0.0 0.0 3.8413255953670544E-5 3.8413255953670544E-5 3 3.8413255953670544E-5 0.0 0.0 3.8413255953670544E-5 3.8413255953670544E-5 4 3.8413255953670544E-5 0.0 0.0 1.1523976786101162E-4 1.1523976786101162E-4 5 3.8413255953670544E-5 0.0 0.0 1.1523976786101162E-4 1.1523976786101162E-4 6 3.8413255953670544E-5 0.0 0.0 1.5365302381468217E-4 1.5365302381468217E-4 7 3.8413255953670544E-5 0.0 0.0 1.920662797683527E-4 1.920662797683527E-4 8 7.682651190734109E-5 0.0 0.0 1.920662797683527E-4 1.920662797683527E-4 9 7.682651190734109E-5 0.0 0.0 2.3047953572202323E-4 1.920662797683527E-4 10 1.1523976786101162E-4 0.0 0.0 2.3047953572202323E-4 1.920662797683527E-4 11 1.1523976786101162E-4 0.0 0.0 2.3047953572202323E-4 1.920662797683527E-4 12 1.1523976786101162E-4 0.0 0.0 2.3047953572202323E-4 1.920662797683527E-4 13 1.1523976786101162E-4 0.0 0.0 2.3047953572202323E-4 1.920662797683527E-4 14 1.1523976786101162E-4 0.0 0.0 2.6889279167569376E-4 2.6889279167569376E-4 15 1.1523976786101162E-4 0.0 0.0 3.457193035830349E-4 3.0730604762936435E-4 16 1.1523976786101162E-4 0.0 0.0 4.2254581549037594E-4 3.0730604762936435E-4 17 1.1523976786101162E-4 0.0 0.0 6.914386071660698E-4 3.0730604762936435E-4 18 1.1523976786101162E-4 0.0 0.0 8.450916309807519E-4 3.0730604762936435E-4 19 1.1523976786101162E-4 0.0 0.0 0.0011139844226564456 3.0730604762936435E-4 20 1.1523976786101162E-4 0.0 0.0 0.0014597037262394806 3.0730604762936435E-4 21 1.1523976786101162E-4 0.0 0.0 0.002189555589359221 3.0730604762936435E-4 22 1.1523976786101162E-4 0.0 0.0 0.0036876725715523717 3.0730604762936435E-4 23 1.1523976786101162E-4 0.0 0.0 0.004532764202533124 3.841325595367054E-4 24 1.1523976786101162E-4 0.0 0.0 0.006453427000216651 3.841325595367054E-4 25 1.1523976786101162E-4 0.0 0.0 0.008066783750270813 3.841325595367054E-4 26 1.1523976786101162E-4 0.0 0.0 0.010064273059861682 3.841325595367054E-4 27 1.1523976786101162E-4 0.0 0.0 0.020819984726889434 3.841325595367054E-4 28 1.1523976786101162E-4 0.0 0.0 0.056774792299525055 3.841325595367054E-4 29 1.1523976786101162E-4 0.0 0.0 0.10978508551559041 3.841325595367054E-4 30 1.1523976786101162E-4 0.0 0.0 0.1804654764703442 3.841325595367054E-4 31 1.5365302381468217E-4 0.0 0.0 0.48980742666525307 4.2254581549037594E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CTTATAC 1505 0.0 20.405317 37 TACTTAC 745 0.0 17.134228 31 TCGTTAC 1085 0.0 16.027649 23 GTACTTA 835 0.0 15.730538 30 GTCTTAG 405 0.0 15.074074 1 TACGGAT 1690 0.0 14.887573 27 CGTTACG 935 0.0 14.839572 24 ACGGATG 1740 0.0 14.672415 28 GTTACGG 1325 0.0 14.381133 25 TTCGTTA 155 1.2119017E-7 14.32258 22 CTCGTTA 1255 0.0 14.298804 22 TCTTATA 2560 0.0 14.019531 37 ATACCGT 185 4.9058144E-9 14.000001 6 GTATAAA 310 0.0 13.725806 1 CGTTACA 270 0.0 13.703704 24 TATACTC 190 7.1377144E-9 13.631579 5 TTACGGA 1890 0.0 13.5079365 26 CGGATGG 1955 0.0 13.3427105 29 CGACTTA 195 1.0275471E-8 13.28205 19 ATCTCGT 1400 0.0 13.214286 20 >>END_MODULE