##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2727490.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1737504 Sequences flagged as poor quality 0 Sequence length 43 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.703334783689705 31.0 31.0 34.0 30.0 34.0 2 31.91413429839586 31.0 31.0 34.0 30.0 34.0 3 32.02118153397057 33.0 31.0 34.0 30.0 34.0 4 35.69249912518187 37.0 35.0 37.0 35.0 37.0 5 35.60259717387701 37.0 35.0 37.0 33.0 37.0 6 35.62672719026834 37.0 35.0 37.0 33.0 37.0 7 35.55085628579848 37.0 35.0 37.0 33.0 37.0 8 35.371600295596444 37.0 35.0 37.0 33.0 37.0 9 37.05890231044072 39.0 37.0 39.0 33.0 39.0 10 36.923832117796564 39.0 37.0 39.0 33.0 39.0 11 36.922742623901875 39.0 37.0 39.0 33.0 39.0 12 36.72436552664051 39.0 37.0 39.0 32.0 39.0 13 36.85594623091515 39.0 37.0 39.0 33.0 39.0 14 37.92379873657845 40.0 37.0 41.0 33.0 41.0 15 37.909796466655614 40.0 37.0 41.0 33.0 41.0 16 37.81096791719616 40.0 37.0 41.0 32.0 41.0 17 37.860520608873415 40.0 37.0 41.0 33.0 41.0 18 37.705441253660425 40.0 37.0 41.0 32.0 41.0 19 37.75145553621747 40.0 37.0 41.0 32.0 41.0 20 37.64834613330387 40.0 37.0 41.0 32.0 41.0 21 37.45698484722913 39.0 36.0 41.0 32.0 41.0 22 37.24166620623607 39.0 36.0 41.0 31.0 41.0 23 37.51162587251598 39.0 37.0 41.0 32.0 41.0 24 37.43590518352764 39.0 36.0 41.0 32.0 41.0 25 37.41699990330957 39.0 36.0 41.0 31.0 41.0 26 37.25858415289979 39.0 36.0 41.0 31.0 41.0 27 37.17820678398438 39.0 36.0 41.0 31.0 41.0 28 37.03324539108975 39.0 36.0 41.0 30.0 41.0 29 36.819679264047736 39.0 36.0 41.0 30.0 41.0 30 36.70498485183344 39.0 36.0 41.0 30.0 41.0 31 36.50704861686649 39.0 35.0 41.0 30.0 41.0 32 36.35000034532295 39.0 35.0 40.0 30.0 41.0 33 36.14248254968046 39.0 35.0 40.0 29.0 41.0 34 36.11906677624915 39.0 35.0 40.0 29.0 41.0 35 35.973399773468145 38.0 35.0 40.0 27.0 41.0 36 35.76289838757206 38.0 35.0 40.0 27.0 41.0 37 35.677174268375786 38.0 35.0 40.0 26.0 41.0 38 35.61896720813304 38.0 35.0 40.0 26.0 41.0 39 35.46679834981675 38.0 34.0 40.0 25.0 41.0 40 35.233780181225484 38.0 34.0 40.0 24.0 41.0 41 35.10300810818277 38.0 34.0 40.0 24.0 41.0 42 35.0923750391366 38.0 34.0 40.0 24.0 41.0 43 34.83716756911063 38.0 33.0 40.0 24.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 3.0 11 3.0 12 4.0 13 9.0 14 18.0 15 46.0 16 64.0 17 108.0 18 191.0 19 430.0 20 856.0 21 1562.0 22 2906.0 23 4814.0 24 7434.0 25 11109.0 26 15257.0 27 20794.0 28 26945.0 29 34394.0 30 43259.0 31 53405.0 32 66116.0 33 80675.0 34 101160.0 35 125868.0 36 164227.0 37 228004.0 38 354401.0 39 393442.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 42.60772924839309 19.58689015967733 12.195655376908485 25.60972521502109 2 17.938318415382064 23.13784601359191 34.80227959187432 24.1215559791517 3 19.946428900307566 25.223136176952686 30.747612667366518 24.082822255373227 4 14.598297327660829 16.452854209256497 34.535862939020575 34.4129855240621 5 12.588747997126912 40.04721715748568 34.371316555242466 12.992718290144945 6 33.97413761349614 36.020060961010735 15.603359762049468 14.402441663443652 7 27.763216660220642 32.744787925668085 21.087663683076414 18.404331731034866 8 28.66358868814115 35.01096975891854 19.493883179549513 16.831558373390795 9 28.45190572223143 13.514789030701513 18.446979114868224 39.586326132198835 10 16.427760741845773 28.867789656887123 33.339952023132035 21.364497578135072 11 36.575628027331156 22.361560030940936 20.305967640937805 20.756844300790096 12 21.69525940659705 26.723621931230085 29.78456452474354 21.796554137429325 13 30.920619463322097 20.344701364716283 24.81548243917712 23.9191967327845 14 22.29502781000792 21.166224653295764 26.178644768587585 30.36010276810874 15 25.703537948689615 27.8365977862497 22.760638248890363 23.69922601617032 16 23.5054998434536 26.847650422675283 25.867048363629667 23.77980137024145 17 23.561096837762676 27.335188868629945 26.020026428716136 23.083687864891246 18 23.639485146509013 25.799365066209916 27.33294426948082 23.228205517800244 19 24.358102197174798 26.67780908705822 27.35458450743135 21.609504208335636 20 23.71217562664604 25.445121277418643 27.493116562609355 23.349586533325965 21 23.551082472328122 26.121839143967442 27.788885665874723 22.538192717829713 22 24.17617455844706 25.7424443339411 26.16316278984106 23.91821831777078 23 23.04029228134151 25.9194223437759 27.1887143856935 23.85157098918909 24 23.042364219017625 26.722988839162387 26.93754949628893 23.29709744553106 25 23.90100972429416 25.48748089213032 26.285004235961473 24.32650514761405 26 23.591255041715012 25.786242794261195 27.241376134961413 23.38112602906238 27 24.00005985597731 26.0206019669595 26.25444315523878 23.72489502182441 28 23.15459417647384 26.71096008987605 26.70451406155036 23.429931672099748 29 23.59229101055307 26.21375260143286 27.097721789417463 23.096234598596606 30 23.72823314363593 26.76442759268468 26.812427482181334 22.694911781498057 31 24.217555758145018 25.984573272924838 26.49254332651896 23.305327642411182 32 22.63614932685047 26.800226071421996 26.82422601617032 23.739398585557215 33 22.98279601082933 26.264227305375986 27.15544827522699 23.59752840856769 34 23.18141425861466 26.251392802548946 27.35740464482384 23.209788294012558 35 22.94895436211945 26.87550647365416 27.383591634896952 22.79194752932943 36 23.55344217912592 26.28793948100263 26.921491979299038 23.237126360572407 37 23.10774536346391 26.5299533123377 27.35947658249995 23.002824741698436 38 23.688636112492404 26.15205490174411 27.063995248356264 23.09531373740722 39 23.125702156656907 25.819163581781684 27.32085796637015 23.73427629519126 40 23.834132180415125 25.964314326758387 27.435505184448495 22.766048308377997 41 22.610595428845055 26.349291857745367 27.32943348619629 23.71067922721329 42 23.077874928633257 26.654557342026266 27.31838315192368 22.9491845774168 43 22.883573217673167 25.589754037976313 27.261232204357515 24.265440539993 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 504.0 1 601.0 2 698.0 3 901.5 4 1105.0 5 1105.0 6 1670.5 7 2236.0 8 2340.0 9 2444.0 10 3233.0 11 4022.0 12 4022.0 13 7666.0 14 11310.0 15 16100.5 16 20891.0 17 17940.5 18 14990.0 19 14990.0 20 17595.0 21 20200.0 22 17662.0 23 15124.0 24 17858.5 25 20593.0 26 20593.0 27 24534.5 28 28476.0 29 32223.5 30 35971.0 31 40673.5 32 45376.0 33 45376.0 34 50329.0 35 55282.0 36 61907.0 37 68532.0 38 76105.5 39 83679.0 40 83679.0 41 90189.0 42 96699.0 43 103570.0 44 110441.0 45 121036.0 46 131631.0 47 131631.0 48 150939.0 49 170247.0 50 173128.5 51 176010.0 52 156651.5 53 137293.0 54 137293.0 55 130196.0 56 123099.0 57 114311.5 58 105524.0 59 95400.0 60 85276.0 61 85276.0 62 73113.5 63 60951.0 64 51539.5 65 42128.0 66 34248.0 67 26368.0 68 26368.0 69 21206.0 70 16044.0 71 13054.0 72 10064.0 73 8028.5 74 5993.0 75 5993.0 76 4694.0 77 3395.0 78 2716.0 79 2037.0 80 1595.5 81 1154.0 82 1154.0 83 937.0 84 720.0 85 565.0 86 410.0 87 349.0 88 288.0 89 288.0 90 214.5 91 141.0 92 105.0 93 69.0 94 67.5 95 66.0 96 66.0 97 39.5 98 13.0 99 11.5 100 10.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 1737504.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 64.00399390452361 #Duplication Level Percentage of deduplicated Percentage of total 1 84.6212299779682 54.16096687703167 2 8.751204750964725 11.202241110759685 3 2.723457608079226 5.229364924401937 4 1.2233893153698823 3.13207209135173 5 0.6983059086336885 2.2347183559841706 6 0.44422787946974357 1.7059415093880548 7 0.29078007223481506 1.3027760179611825 8 0.21671866201940435 1.1096687938309173 9 0.15525569776646114 0.8943286260138424 >10 0.7946335102084142 8.830985869283223 >50 0.04802789586629524 2.1211799160556244 >100 0.028786268442030905 3.4033374022294662 >500 0.0023532676682389004 1.0351548090471074 >1k 0.0010861235391871847 1.2454414483017384 >5k 4.52551474661327E-4 1.7624105856869525 >10k+ 9.051029493226539E-5 0.6294116626726074 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 10865 0.6253223014162845 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 7842 0.451337090446986 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 6209 0.35735169530544963 No Hit GTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGAAGC 5811 0.3344452732195149 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 5325 0.3064741145919664 No Hit CCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTG 5236 0.3013518242260162 No Hit GAGTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGAA 3800 0.21870453247877414 No Hit CATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCG 2928 0.16851759765732913 No Hit TATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAGAG 1968 0.11326592629427042 No Hit ACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAGAGTACAT 1828 0.10520839088715767 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 5.755382433651951E-5 0.0 5 0.0 0.0 0.0 5.755382433651951E-5 0.0 6 0.0 0.0 0.0 5.755382433651951E-5 0.0 7 0.0 0.0 0.0 5.755382433651951E-5 0.0 8 0.0 0.0 0.0 5.755382433651951E-5 5.755382433651951E-5 9 0.0 0.0 0.0 1.7266147300955853E-4 1.7266147300955853E-4 10 0.0 0.0 0.0 4.028767703556366E-4 1.7266147300955853E-4 11 0.0 0.0 0.0 4.028767703556366E-4 1.7266147300955853E-4 12 0.0 0.0 0.0 4.028767703556366E-4 2.3021529734607805E-4 13 0.0 0.0 0.0 4.028767703556366E-4 2.3021529734607805E-4 14 0.0 0.0 0.0 5.755382433651951E-4 2.3021529734607805E-4 15 0.0 0.0 0.0 6.906458920382341E-4 2.3021529734607805E-4 16 0.0 0.0 0.0 8.633073650477927E-4 2.3021529734607805E-4 17 0.0 0.0 0.0 0.0013812917840764682 2.3021529734607805E-4 18 0.0 0.0 0.0 0.0014963994327495073 2.3021529734607805E-4 19 0.0 0.0 0.0 0.001899276203105144 2.3021529734607805E-4 20 0.0 0.0 0.0 0.002474814446470339 3.4532294601911706E-4 21 0.0 0.0 0.0 0.0033381218115181317 3.4532294601911706E-4 22 0.0 0.0 0.0 0.0047194135955946 4.028767703556366E-4 23 0.0 0.0 0.0 0.0073668895150744975 6.330920677017146E-4 24 0.0 0.0 0.0 0.009669042488535277 6.330920677017146E-4 25 0.0 0.0 0.0 0.01070501132659263 6.330920677017146E-4 26 0.0 0.0 0.0 0.01300716430005341 6.330920677017146E-4 27 0.0 0.0 0.0 0.02273376061292521 6.330920677017146E-4 28 0.0 0.0 0.0 0.037525093467410724 6.330920677017146E-4 29 0.0 0.0 0.0 0.056575409322798684 6.330920677017146E-4 30 0.0 0.0 0.0 0.08656095180212535 6.330920677017146E-4 31 0.0 0.0 0.0 0.17530894892903845 6.330920677017146E-4 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGAACGT 80 3.383811E-4 16.1875 4 ACGGACC 175 1.3278623E-10 15.857143 8 TTAGAGT 255 0.0 15.235295 4 TCTATAC 160 1.0973963E-8 15.031251 3 CGCGGTC 75 0.0041055293 14.8 10 TACGCTC 75 0.0041055293 14.8 34 GTCCTAT 200 6.184564E-11 14.799999 1 TAACGCA 100 1.09387576E-4 14.799999 4 CTTATAC 405 0.0 14.617284 37 TCTAGCG 115 2.2110195E-5 14.478261 28 TATACTG 320 0.0 14.453126 5 CCGTGTA 90 8.277018E-4 14.388888 9 ACTCCGT 90 8.277018E-4 14.388888 6 AGAACCG 195 6.730261E-10 14.23077 5 TCGTTAC 290 0.0 14.034484 23 TGTGCGC 185 4.9021764E-9 14.0 10 TGTTACG 225 2.7284841E-11 13.977777 24 GTGTAAT 215 1.9826984E-10 13.767442 1 TACGGAT 560 0.0 13.544643 27 TAATACC 205 1.4242687E-9 13.536585 4 >>END_MODULE