SRR2727484.fastq FastQC Report

Basic Statistics

Measure	Value
Filename	SRR2727484.fastq
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	10128293
Sequences flagged as poor quality	0
Sequence length	43
%GC	46

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT	92466	0.912947522351496	No Hit
GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT	54526	0.5383533039575376	No Hit
GTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGAAGC	52251	0.5158914735187855	No Hit
CCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTG	50573	0.4993240223204443	No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT	46302	0.45715502108795625	No Hit
ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	40160	0.39651301556935603	No Hit
GAGTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGAA	34775	0.34334512242092524	No Hit
CATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCG	32673	0.3225913784287244	No Hit
TATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAGAG	21245	0.20975893963573133	No Hit
ACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAGAGTACAT	20909	0.2064415000632387	No Hit
GGTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAG	17885	0.1765845439108051	No Hit
GCTTCCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTAC	14759	0.14572050788815055	No Hit
ACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGAT	14532	0.14347926151030585	No Hit
GTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAGA	12925	0.127612816888295	No Hit
CCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACCTGT	12608	0.12448297062496118	No Hit
GTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGCTGT	12047	0.11894403133874583	No Hit
GCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGATACCAC	11551	0.1140468586364948	No Hit
ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTT	10432	0.10299860006024707	No Hit
GAACAGTGGTATCAACGCAAAAAAAAAAAAAAAAAAAAAAAAA	10386	0.10254442678544154	No Hit
CTGCTTCCCATGTACTCTGCGTTGATACCACTGCTTCCCATGT	10330	0.1019915201900261	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
CGTGCGC	685	13.773723	10
TATACTG	1425	13.501755	5
TATACCG	560	12.553572	5
CAAGACG	1600	12.140624	4
ATACCGA	520	12.096154	6
CTTATAC	4195	12.083433	37
TCTTATA	5965	11.816429	37
ACGGACC	1365	11.791208	8
TACCGAC	425	11.752941	7
GTATTAG	1360	11.698529	1
ATGTACC	5360	11.63153	34
GCGCAAG	1540	11.412337	1
CGAACGA	535	11.411216	16
GTACTCC	3890	11.176092	36
GTACCGT	550	11.1	6
GTGCGCC	1235	11.08502	11
TGTACCT	5780	11.010381	35
TAGTACT	825	10.987879	4
CGGACCA	1550	10.980644	9
TACACTG	3725	10.975839	5