##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2727483.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 14803775 Sequences flagged as poor quality 0 Sequence length 43 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.42022740821176 31.0 31.0 34.0 30.0 34.0 2 31.630346381243974 31.0 31.0 34.0 30.0 34.0 3 31.718862182112332 31.0 31.0 34.0 30.0 34.0 4 35.470745738840264 37.0 35.0 37.0 33.0 37.0 5 35.33462789052117 37.0 35.0 37.0 33.0 37.0 6 35.31323206411878 37.0 35.0 37.0 32.0 37.0 7 35.211287526323524 37.0 35.0 37.0 32.0 37.0 8 35.11822106185753 37.0 35.0 37.0 32.0 37.0 9 36.68744695187545 39.0 35.0 39.0 32.0 39.0 10 36.536196071610114 38.0 35.0 39.0 32.0 39.0 11 36.57721844597071 38.0 35.0 39.0 32.0 39.0 12 36.40534323170948 38.0 35.0 39.0 32.0 39.0 13 36.49809315529316 38.0 35.0 39.0 32.0 39.0 14 37.508836563646774 39.0 36.0 41.0 32.0 41.0 15 37.485835673671076 39.0 36.0 41.0 32.0 41.0 16 37.394279364553974 39.0 36.0 41.0 32.0 41.0 17 37.39136206812114 39.0 36.0 41.0 32.0 41.0 18 37.24740290905529 39.0 36.0 41.0 31.0 41.0 19 37.31393397967748 39.0 36.0 41.0 31.0 41.0 20 37.1990472024872 39.0 36.0 40.0 31.0 41.0 21 37.026133266683665 39.0 36.0 40.0 31.0 41.0 22 36.844655028869326 39.0 36.0 40.0 30.0 41.0 23 37.03702940635075 39.0 36.0 40.0 31.0 41.0 24 37.029762003272815 39.0 36.0 41.0 31.0 41.0 25 36.969976576920416 39.0 36.0 41.0 30.0 41.0 26 36.80294283046047 39.0 36.0 40.0 30.0 41.0 27 36.69123139199292 39.0 36.0 40.0 30.0 41.0 28 36.42429893726431 39.0 35.0 40.0 30.0 41.0 29 36.35144988356011 39.0 35.0 40.0 29.0 41.0 30 36.33685374169764 39.0 35.0 40.0 30.0 41.0 31 36.17596592760968 38.0 35.0 40.0 29.0 41.0 32 36.118357378438944 38.0 35.0 40.0 29.0 41.0 33 35.91601635393675 38.0 35.0 40.0 27.0 41.0 34 35.8956960640107 38.0 35.0 40.0 27.0 41.0 35 35.698196642410466 38.0 34.0 40.0 27.0 41.0 36 35.56334752453344 38.0 34.0 40.0 26.0 41.0 37 35.54782499734021 38.0 34.0 40.0 26.0 41.0 38 35.512915388135795 38.0 34.0 40.0 26.0 41.0 39 35.45235624021576 38.0 34.0 40.0 26.0 41.0 40 35.30899044331598 38.0 34.0 40.0 25.0 41.0 41 35.15977904284549 38.0 34.0 40.0 25.0 41.0 42 35.21861572470535 38.0 34.0 40.0 25.0 41.0 43 34.97938573100442 38.0 33.0 40.0 24.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 1.0 10 5.0 11 13.0 12 18.0 13 28.0 14 52.0 15 140.0 16 271.0 17 646.0 18 1252.0 19 2959.0 20 6431.0 21 12971.0 22 24382.0 23 41040.0 24 65699.0 25 98652.0 26 141243.0 27 197675.0 28 262821.0 29 343021.0 30 436764.0 31 539078.0 32 657143.0 33 790766.0 34 962205.0 35 1167521.0 36 1451790.0 37 1872641.0 38 2759537.0 39 2967010.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 40.972495191260336 19.765762449105043 12.459524682049004 26.802217677585617 2 18.81551158403853 22.084421034499645 34.99695179101276 24.103115590449057 3 19.40994780047657 24.196956519536403 31.252413658002776 25.140682021984258 4 15.070054766436265 16.243485192121604 35.02014182193393 33.6663182195082 5 13.57211927363122 38.61195539651204 34.33289144154109 13.48303388831565 6 34.453158062723865 36.00849107744477 15.510665353938439 14.027685505892922 7 27.927775178966176 32.90367490724495 21.175213754599756 17.993336159189123 8 27.33479804982175 35.25491302049646 19.900106560657672 17.510182369024115 9 28.633966674040913 13.697114418450699 18.535387088766207 39.13353181874218 10 15.84839677717339 27.75703494547843 33.97796170233606 22.416606575012114 11 36.81475164273977 21.873501860167423 21.049259394985402 20.2624871021074 12 21.16169693203254 25.185049083764106 29.987108018056208 23.66614596614715 13 30.397415524080852 20.302152660385612 24.593943098973067 24.70648871656047 14 22.232579190105227 20.95304069401217 25.36671896188641 31.447661153996194 15 25.573416240114433 28.34609415503816 22.07320092341312 24.007288681434297 16 24.113430527010845 27.06365099442541 24.73515707986645 24.087761398697292 17 23.651622643548688 26.279992772113868 25.04928641512047 25.019098169216974 18 23.366208956837024 26.723541799304567 26.247656425472556 23.66259281838585 19 24.949710462365175 25.886160793446265 26.43163652514308 22.73249221904548 20 23.886461392448886 24.96702361390929 26.193595890237457 24.952919103404366 21 24.012300916489206 26.012952777247694 27.126776784975455 22.847969521287645 22 25.035681777114284 24.702624837245903 25.682895072371743 24.57879831326807 23 23.917980380004426 25.56706650837371 26.474355358683848 24.040597752938016 24 23.47130377217973 25.104947893358283 26.657896381159535 24.76585195330245 25 24.597388166194094 24.72229549557461 25.912559465406627 24.767756872824666 26 23.901518362714917 25.33831404489733 26.692495664112702 24.06767192827505 27 25.014788457673802 25.712259204155696 25.578658146317405 23.69429419185309 28 23.661721419029945 26.824022926584608 24.999582876664906 24.51467277772055 29 23.996791358960806 26.304297383606546 26.299278393517874 23.39963286391478 30 25.522915607674395 25.468382220075625 25.2880565936729 23.720645578577084 31 24.42069674795787 25.516295674583006 26.51991130640664 23.543096271052484 32 24.221085500151144 25.811510915290185 25.64718120884707 24.3202223757116 33 23.791634228431597 25.138196169558103 26.051193023401126 25.01897657860917 34 24.519212160411787 25.60897473786247 26.7737181901238 23.09809491160194 35 24.377248370770292 25.256524096049827 26.25449927467825 24.111728258501632 36 24.041097625436755 25.300269694723138 26.814721245087824 23.843911434752286 37 23.818424692350433 25.504683771538 27.249833235103882 23.427058301007683 38 24.77293122868998 24.673915943737324 26.352649915308763 24.200502912263932 39 23.211471398342653 25.584629596167197 27.33396042563468 23.869938579855475 40 24.83569224741662 24.384746458251357 27.045837970382554 23.733723323949466 41 23.32556391866264 25.29296750322131 27.24304442616833 24.138424151947728 42 23.381238906967987 25.31713701403865 27.244348147685304 24.057275931308062 43 22.929793245303983 24.7210998545979 26.87638119331049 25.472725706787624 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 3161.0 1 3124.5 2 3088.0 3 4254.0 4 5420.0 5 5420.0 6 7949.5 7 10479.0 8 10239.5 9 10000.0 10 13760.5 11 17521.0 12 17521.0 13 30187.0 14 42853.0 15 59279.0 16 75705.0 17 75612.0 18 75519.0 19 75519.0 20 89913.0 21 104307.0 22 103495.0 23 102683.0 24 127497.5 25 152312.0 26 152312.0 27 184315.5 28 216319.0 29 246775.0 30 277231.0 31 318088.0 32 358945.0 33 358945.0 34 411546.0 35 464147.0 36 530571.0 37 596995.0 38 661353.5 39 725712.0 40 725712.0 41 790755.0 42 855798.0 43 921342.5 44 986887.0 45 1078581.5 46 1170276.0 47 1170276.0 48 1263928.0 49 1357580.0 50 1397195.5 51 1436811.0 52 1413232.0 53 1389653.0 54 1389653.0 55 1277286.0 56 1164919.0 57 1075474.0 58 986029.0 59 878665.0 60 771301.0 61 771301.0 62 654754.5 63 538208.0 64 453034.0 65 367860.0 66 297268.5 67 226677.0 68 226677.0 69 180597.5 70 134518.0 71 106297.0 72 78076.0 73 60939.5 74 43803.0 75 43803.0 76 33657.0 77 23511.0 78 18456.0 79 13401.0 80 10287.0 81 7173.0 82 7173.0 83 5593.0 84 4013.0 85 3142.5 86 2272.0 87 1775.5 88 1279.0 89 1279.0 90 985.5 91 692.0 92 507.5 93 323.0 94 280.0 95 237.0 96 237.0 97 137.0 98 37.0 99 40.5 100 44.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 1.4803775E7 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 41.95764904046377 #Duplication Level Percentage of deduplicated Percentage of total 1 74.90422104295196 31.428050181694996 2 12.277294533935619 10.302528304425499 3 4.603369034169262 5.794396270182378 4 2.231941260963321 3.745880324257168 5 1.332098186768835 2.794585410394247 6 0.8865494621615853 2.231851871423263 7 0.5792592839699667 1.7013050418169546 8 0.4283239834529548 1.4377173898665991 9 0.3379033466397064 1.2759867025116276 >10 2.086029963820351 16.556570229581816 >50 0.19678938304533827 5.738650465860912 >100 0.12178686257667046 9.621239047344478 >500 0.009666020439554184 2.7583671572992507 >1k 0.004556831684579231 3.3691203918940973 >5k 9.729388626968319E-5 0.23275473287707615 >10k+ 1.1350953398129706E-4 1.0109964785696912 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 35714 0.24124927594481815 No Hit TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 34884 0.23564259791843634 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 29061 0.1963080362947964 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 1.3510067533450082E-5 2 0.0 0.0 0.0 6.755033766725041E-6 1.3510067533450082E-5 3 0.0 0.0 0.0 6.755033766725041E-6 1.3510067533450082E-5 4 0.0 0.0 0.0 6.755033766725041E-6 1.3510067533450082E-5 5 6.755033766725041E-6 0.0 0.0 6.755033766725041E-6 1.3510067533450082E-5 6 1.3510067533450082E-5 0.0 0.0 6.755033766725041E-6 6.0795303900525374E-5 7 1.3510067533450082E-5 0.0 0.0 6.755033766725041E-6 6.755033766725042E-5 8 1.3510067533450082E-5 0.0 0.0 1.3510067533450082E-5 1.0132550650087562E-4 9 1.3510067533450082E-5 0.0 0.0 1.3510067533450082E-5 1.5536577663467595E-4 10 1.3510067533450082E-5 0.0 0.0 2.7020135066900165E-5 1.5536577663467595E-4 11 1.3510067533450082E-5 0.0 0.0 3.377516883362521E-5 1.5536577663467595E-4 12 1.3510067533450082E-5 0.0 0.0 4.728523636707529E-5 1.8914094546830117E-4 13 1.3510067533450082E-5 0.0 0.0 5.404027013380033E-5 1.8914094546830117E-4 14 2.0265101300175123E-5 6.755033766725041E-6 0.0 6.755033766725042E-5 2.0940604676847628E-4 15 2.0265101300175123E-5 1.3510067533450082E-5 0.0 8.10604052007005E-5 2.0940604676847628E-4 16 6.0795303900525374E-5 1.3510067533450082E-5 0.0 1.2159060780105075E-4 2.904664519691768E-4 17 6.0795303900525374E-5 1.3510067533450082E-5 0.0 2.2291611430192635E-4 2.972214857359018E-4 18 6.0795303900525374E-5 1.3510067533450082E-5 0.0 2.499362493688265E-4 3.445067221029771E-4 19 6.0795303900525374E-5 1.3510067533450082E-5 0.0 2.702013506690017E-4 3.445067221029771E-4 20 6.0795303900525374E-5 2.0265101300175123E-5 0.0 3.107315532693519E-4 3.512617558697022E-4 21 6.0795303900525374E-5 2.0265101300175123E-5 0.0 4.1881209353695256E-4 3.580167896364272E-4 22 6.0795303900525374E-5 2.0265101300175123E-5 0.0 6.214631065387038E-4 3.580167896364272E-4 23 6.0795303900525374E-5 2.0265101300175123E-5 0.0 8.916644572077054E-4 4.86362431204203E-4 24 6.0795303900525374E-5 2.0265101300175123E-5 0.0 0.001459087293612609 4.86362431204203E-4 25 6.0795303900525374E-5 2.0265101300175123E-5 0.0 0.0018711443533828364 5.066275325043781E-4 26 6.0795303900525374E-5 2.0265101300175123E-5 0.0 0.0031343356677604193 5.133825662711032E-4 27 6.0795303900525374E-5 2.0265101300175123E-5 0.0 0.011733493652801397 5.201376000378282E-4 28 6.0795303900525374E-5 2.0265101300175123E-5 0.0 0.023750698723805246 5.201376000378282E-4 29 6.0795303900525374E-5 2.0265101300175123E-5 0.0 0.03891574953010296 5.201376000378282E-4 30 6.0795303900525374E-5 2.0265101300175123E-5 0.0 0.06103173008236075 5.201376000378282E-4 31 6.0795303900525374E-5 2.0265101300175123E-5 0.0 0.16343128695214565 5.268926338045533E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 10290 0.0 27.417395 1 GTATCAA 16285 0.0 17.267426 2 CGTTACG 5065 0.0 15.157947 24 TCGTTAC 8640 0.0 15.052663 23 TACTTAC 5715 0.0 15.020123 31 TACGGAT 9540 0.0 14.078617 27 GTTACGG 7445 0.0 13.91538 25 CTCGTTA 7570 0.0 13.905548 22 GTACTTA 6960 0.0 13.901581 30 ACGGATG 9955 0.0 13.696133 28 AGTCGGG 6615 0.0 13.256236 29 GATTTCG 3085 0.0 13.1329 19 TTACGGA 10600 0.0 13.107075 26 ATTTCGT 3090 0.0 13.05178 20 CGGATGG 10415 0.0 13.020163 29 CTTATAC 4370 0.0 12.954233 37 TATACCG 750 0.0 12.826666 5 ACTTACA 6015 0.0 12.763925 32 TCTTATA 6255 0.0 12.658673 37 GTGTACT 7515 0.0 12.628742 28 >>END_MODULE