##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2727479.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 3139060 Sequences flagged as poor quality 0 Sequence length 43 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.519589940937735 31.0 31.0 34.0 30.0 34.0 2 31.732964326900408 31.0 31.0 34.0 30.0 34.0 3 31.83031576331768 31.0 31.0 34.0 30.0 34.0 4 35.56055538919294 37.0 35.0 37.0 33.0 37.0 5 35.42986945136442 37.0 35.0 37.0 33.0 37.0 6 35.40698234503323 37.0 35.0 37.0 33.0 37.0 7 35.29664740399993 37.0 35.0 37.0 32.0 37.0 8 35.21989831350786 37.0 35.0 37.0 32.0 37.0 9 36.833172032391865 39.0 37.0 39.0 33.0 39.0 10 36.67534867125828 39.0 35.0 39.0 32.0 39.0 11 36.709260096971704 39.0 35.0 39.0 32.0 39.0 12 36.54335724707396 39.0 35.0 39.0 32.0 39.0 13 36.62759934502686 39.0 35.0 39.0 32.0 39.0 14 37.6711658904258 39.0 37.0 41.0 32.0 41.0 15 37.63696361331099 39.0 36.0 41.0 32.0 41.0 16 37.54930743598402 39.0 36.0 41.0 32.0 41.0 17 37.53311787605207 39.0 36.0 41.0 32.0 41.0 18 37.405560900396935 39.0 36.0 41.0 32.0 41.0 19 37.466025179512336 39.0 36.0 41.0 32.0 41.0 20 37.356310169286346 39.0 36.0 41.0 31.0 41.0 21 37.19398004498162 39.0 36.0 41.0 31.0 41.0 22 37.030618720253834 39.0 36.0 40.0 31.0 41.0 23 37.19936987505814 39.0 36.0 41.0 31.0 41.0 24 37.19575350582659 39.0 36.0 41.0 31.0 41.0 25 37.1491765050684 39.0 36.0 41.0 31.0 41.0 26 36.976430842354084 39.0 36.0 41.0 31.0 41.0 27 36.93517294986397 39.0 36.0 41.0 30.0 41.0 28 36.691455722413714 39.0 36.0 41.0 30.0 41.0 29 36.577813421852404 39.0 35.0 40.0 30.0 41.0 30 36.53372187852415 39.0 35.0 40.0 30.0 41.0 31 36.386896714303006 39.0 35.0 40.0 30.0 41.0 32 36.34853491172517 39.0 35.0 40.0 30.0 41.0 33 36.11230177186801 38.0 35.0 40.0 29.0 41.0 34 36.07756430268934 38.0 35.0 40.0 29.0 41.0 35 35.877714347607245 38.0 35.0 40.0 27.0 41.0 36 35.76431320204138 38.0 34.0 40.0 27.0 41.0 37 35.709094760851976 38.0 34.0 40.0 27.0 41.0 38 35.65985932094321 38.0 34.0 40.0 27.0 41.0 39 35.615132874172524 38.0 34.0 40.0 26.0 41.0 40 35.45661758615636 38.0 34.0 40.0 26.0 41.0 41 35.332048129057746 38.0 34.0 40.0 25.0 41.0 42 35.36015367657834 38.0 34.0 40.0 26.0 41.0 43 35.12260804189789 38.0 34.0 40.0 25.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 1.0 11 2.0 12 3.0 13 3.0 14 4.0 15 14.0 16 51.0 17 94.0 18 215.0 19 522.0 20 1159.0 21 2271.0 22 4488.0 23 7773.0 24 12398.0 25 18652.0 26 27158.0 27 37748.0 28 51682.0 29 67493.0 30 86617.0 31 108554.0 32 133093.0 33 162255.0 34 200314.0 35 244009.0 36 306978.0 37 398702.0 38 583658.0 39 683149.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 40.64532057367492 20.728466483597 12.819124196415487 25.80708874631259 2 18.55262403394647 22.479309092530887 34.853459315846145 24.1146075576765 3 19.25907755824992 24.434767095882208 31.37620816422751 24.92994718164036 4 14.583028040241347 16.78601237313081 35.548030302064944 33.082929284562894 5 13.339980758571038 38.191656100870965 35.12385873478048 13.344504405777528 6 33.89062330761438 36.755398112810845 15.51327467458411 13.840703904990667 7 27.52566054806216 32.24086191407619 21.796939211101414 18.43653832676024 8 26.78699992991532 34.85489286601722 20.125865705019976 18.232241499047486 9 26.765719674042547 14.400744171822138 19.87690582531076 38.95663032882455 10 15.96379170834581 28.01765496677349 34.63995591036807 21.378597414512626 11 35.605690875612446 22.54397813358139 21.726981962753182 20.123349028052985 12 20.741846285193656 26.153816747688797 30.393844016998717 22.710492950118823 13 29.885698266359995 21.173153746663015 24.936955649143375 24.00419233783362 14 22.006173822736745 21.76874605773703 25.68784922875001 30.537230890776218 15 24.523296783113416 29.029072397469307 22.500748631756004 23.946882187661274 16 23.986416315712347 27.32461310073716 24.9619949921314 23.726975591419087 17 22.936930163807 27.460354373602286 26.090804253502643 23.511911209088073 18 23.06464355571413 26.75539811281084 26.863105515663925 23.316852815811103 19 23.70461220875039 26.571425840856815 27.02490554497206 22.69905640542073 20 23.31780851592515 26.340656119984963 26.87148381999707 23.47005154409282 21 23.628570336342726 26.410358514969452 26.99725395500564 22.963817193682186 22 24.056246137378707 26.310551566392487 26.49605295852899 23.13714933769982 23 23.709964129389054 26.394971743133294 26.480029053283467 23.415035074194186 24 23.514236746032253 26.461615897752832 26.523895688518216 23.5002516676967 25 23.847202665766183 26.258625193529273 26.38926939911948 23.50490274158506 26 23.680337425853597 26.459226647467716 26.587895739488893 23.272540187189797 27 23.84057647830879 26.726058119309602 26.01262798417361 23.420737418208 28 23.497320854013623 26.854631641319376 26.219218492160074 23.42882901250693 29 23.547495110001083 26.738259224098933 26.422081769701755 23.292163896198225 30 23.676642052079284 26.611246678942102 26.214694844953584 23.497416424025026 31 23.462151089816697 26.29267997425981 26.705606136868997 23.539562799054494 32 23.283307741808056 26.722776882251374 26.20182475008442 23.79209062585615 33 23.110485304517915 26.53236956286277 26.561359132988855 23.79578599963046 34 23.844685988799196 26.495256541767283 26.56489522341083 23.095162246022692 35 23.446222754582582 26.430842354080518 26.78833791007499 23.334596981261907 36 23.424241651959505 26.332118532299475 26.81000044599339 23.43363936974763 37 23.435678196657598 26.141870496263213 26.9943868546635 23.428064452415693 38 23.2740374507018 25.901671200932764 27.067593483399488 23.756697864965943 39 23.014246303033392 25.922696603441796 27.386415041445527 23.676642052079284 40 23.35845762744261 25.596516154517595 27.83275885137589 23.212267366663905 41 22.745344147611068 25.635253865806963 27.788032086038495 23.831369900543475 42 22.581887571438582 25.82926098895848 27.664077781246615 23.924773658356322 43 22.5060686957242 25.07228278529241 27.90191968296242 24.519728836020974 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 1121.0 1 954.5 2 788.0 3 1032.5 4 1277.0 5 1277.0 6 1815.5 7 2354.0 8 2541.5 9 2729.0 10 3850.0 11 4971.0 12 4971.0 13 7934.0 14 10897.0 15 14189.5 16 17482.0 17 18007.5 18 18533.0 19 18533.0 20 22876.5 21 27220.0 22 28944.5 23 30669.0 24 37937.0 25 45205.0 26 45205.0 27 52928.5 28 60652.0 29 68149.0 30 75646.0 31 86327.5 32 97009.0 33 97009.0 34 108822.0 35 120635.0 36 134720.0 37 148805.0 38 159514.0 39 170223.0 40 170223.0 41 182994.5 42 195766.0 43 207816.5 44 219867.0 45 230786.0 46 241705.0 47 241705.0 48 252051.0 49 262397.0 50 261203.0 51 260009.0 52 255216.0 53 250423.0 54 250423.0 55 236884.5 56 223346.0 57 205980.0 58 188614.0 59 170671.5 60 152729.0 61 152729.0 62 132865.0 63 113001.0 64 96232.5 65 79464.0 66 64574.5 67 49685.0 68 49685.0 69 39659.5 70 29634.0 71 23034.5 72 16435.0 73 12769.5 74 9104.0 75 9104.0 76 6985.5 77 4867.0 78 3850.5 79 2834.0 80 2143.5 81 1453.0 82 1453.0 83 1083.5 84 714.0 85 547.5 86 381.0 87 287.5 88 194.0 89 194.0 90 163.0 91 132.0 92 84.0 93 36.0 94 35.0 95 34.0 96 34.0 97 23.0 98 12.0 99 10.0 100 8.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 3139060.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 56.584793682126424 #Duplication Level Percentage of deduplicated Percentage of total 1 77.57419448993427 43.89519790270079 2 12.286308878046965 13.90436505958331 3 4.140211942359475 7.028191156760601 4 1.865106406527588 4.22146644834303 5 1.0499810162367251 2.970647958695226 6 0.689336752185735 2.340358673996215 7 0.45313448417989693 1.7948364908303371 8 0.3183564150161104 1.4411305648854413 9 0.24656793215909106 1.255679601286564 >10 1.25678501283919 12.54414043319761 >50 0.07932972434476915 3.082777996850811 >100 0.03803282235539406 3.835418971748792 >500 0.0020894166207827925 0.7742095917714285 >1k 4.5176575521182805E-4 0.5046469961329496 >5k 1.1294143880295701E-4 0.40693215321681203 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 6643 0.21162386192044752 No Hit TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 6092 0.19407083649245316 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 4851 0.15453670844138054 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 6.371334093645869E-5 0.0 5 0.0 0.0 0.0 6.371334093645869E-5 0.0 6 0.0 0.0 0.0 6.371334093645869E-5 3.1856670468229345E-5 7 0.0 0.0 0.0 6.371334093645869E-5 3.1856670468229345E-5 8 0.0 0.0 0.0 6.371334093645869E-5 6.371334093645869E-5 9 0.0 0.0 0.0 1.2742668187291738E-4 9.557001140468803E-5 10 0.0 0.0 0.0 1.2742668187291738E-4 9.557001140468803E-5 11 0.0 0.0 0.0 1.2742668187291738E-4 9.557001140468803E-5 12 0.0 0.0 0.0 1.2742668187291738E-4 1.2742668187291738E-4 13 0.0 0.0 0.0 1.2742668187291738E-4 1.2742668187291738E-4 14 0.0 0.0 0.0 1.2742668187291738E-4 1.9114002280937607E-4 15 0.0 0.0 0.0 1.2742668187291738E-4 1.9114002280937607E-4 16 0.0 0.0 0.0 1.592833523411467E-4 2.5485336374583476E-4 17 0.0 0.0 0.0 1.9114002280937607E-4 2.5485336374583476E-4 18 0.0 0.0 0.0 1.9114002280937607E-4 2.5485336374583476E-4 19 0.0 0.0 0.0 1.9114002280937607E-4 2.5485336374583476E-4 20 0.0 0.0 0.0 2.229966932776054E-4 2.5485336374583476E-4 21 0.0 0.0 0.0 2.8671003421406406E-4 2.5485336374583476E-4 22 0.0 0.0 0.0 3.8228004561875214E-4 2.5485336374583476E-4 23 0.0 0.0 0.0 5.734200684281281E-4 2.5485336374583476E-4 24 0.0 0.0 0.0 0.0011468401368562562 2.5485336374583476E-4 25 0.0 0.0 0.0 0.001592833523411467 2.5485336374583476E-4 26 0.0 0.0 0.0 0.0032175237172911634 2.5485336374583476E-4 27 0.0 0.0 0.0 0.013857651653679763 2.5485336374583476E-4 28 0.0 0.0 0.0 0.027747159977827757 2.5485336374583476E-4 29 0.0 0.0 0.0 0.044025918587092955 3.185667046822934E-4 30 0.0 0.0 0.0 0.06963868164354935 3.185667046822934E-4 31 0.0 0.0 0.0 0.15479156180512638 3.185667046822934E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 2270 0.0 24.04185 1 TAAGGCG 405 0.0 16.444445 5 GTATCAA 3560 0.0 15.122191 2 TAGACCG 150 8.1150574E-8 14.8 5 TAATACT 770 0.0 14.415584 4 CGCTACG 380 0.0 14.118422 28 TTTCGCG 80 0.006301826 13.875 21 CCGTCGT 175 3.5723133E-8 13.742857 9 ACCGTCG 240 8.185452E-11 13.104166 8 CGTACGC 100 0.0018337086 12.950001 3 TATACAC 930 0.0 12.731182 3 GGGTAAG 1095 0.0 12.671232 1 ATTATAC 595 0.0 12.436975 3 ATCTCCG 610 0.0 12.434426 10 TAGACTG 435 0.0 12.333334 5 GATAACG 240 1.1295924E-9 12.333333 11 CTGTGCG 510 0.0 12.333333 9 TACGGAT 665 0.0 12.240602 27 TCTTATA 1290 0.0 12.189922 37 GACGCTA 505 0.0 12.089109 26 >>END_MODULE