##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2727478.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 10432421 Sequences flagged as poor quality 0 Sequence length 43 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.427716442808432 31.0 31.0 34.0 30.0 34.0 2 31.63226953743527 31.0 31.0 34.0 30.0 34.0 3 31.723190810646926 31.0 31.0 34.0 30.0 34.0 4 35.46638829088665 37.0 35.0 37.0 33.0 37.0 5 35.33225068275139 37.0 35.0 37.0 33.0 37.0 6 35.31663973300157 37.0 35.0 37.0 33.0 37.0 7 35.204132482766944 37.0 35.0 37.0 32.0 37.0 8 35.11391948235218 37.0 35.0 37.0 32.0 37.0 9 36.68198139243039 39.0 35.0 39.0 32.0 39.0 10 36.54941408135274 38.0 35.0 39.0 32.0 39.0 11 36.57500123892623 39.0 35.0 39.0 32.0 39.0 12 36.41170012214806 38.0 35.0 39.0 32.0 39.0 13 36.499806612482374 38.0 35.0 39.0 32.0 39.0 14 37.51881332243014 39.0 36.0 41.0 32.0 41.0 15 37.48904784421564 39.0 36.0 41.0 32.0 41.0 16 37.42017964957511 39.0 36.0 41.0 32.0 41.0 17 37.41869169198598 39.0 36.0 41.0 32.0 41.0 18 37.28640130608226 39.0 36.0 41.0 32.0 41.0 19 37.35330955297912 39.0 36.0 41.0 31.0 41.0 20 37.25819040470088 39.0 36.0 41.0 31.0 41.0 21 37.08422829178385 39.0 36.0 40.0 31.0 41.0 22 36.887936558541874 39.0 36.0 40.0 30.0 41.0 23 37.05211436539994 39.0 36.0 40.0 31.0 41.0 24 37.029084907520506 39.0 36.0 41.0 31.0 41.0 25 36.974896718604434 39.0 36.0 41.0 30.0 41.0 26 36.79376436207856 39.0 36.0 41.0 30.0 41.0 27 36.65774023115056 39.0 35.0 40.0 30.0 41.0 28 36.405138270397636 39.0 35.0 40.0 30.0 41.0 29 36.323770867759265 39.0 35.0 40.0 29.0 41.0 30 36.29184452966383 39.0 35.0 40.0 29.0 41.0 31 36.13597054796772 38.0 35.0 40.0 29.0 41.0 32 36.06796035167676 38.0 35.0 40.0 29.0 41.0 33 35.84233496711837 38.0 34.0 40.0 27.0 41.0 34 35.818616119882435 38.0 34.0 40.0 27.0 41.0 35 35.61217391437712 38.0 34.0 40.0 27.0 41.0 36 35.500933196618504 38.0 34.0 40.0 26.0 41.0 37 35.45778558974949 38.0 34.0 40.0 26.0 41.0 38 35.39659528694251 38.0 34.0 40.0 26.0 41.0 39 35.35580686400597 38.0 34.0 40.0 25.0 41.0 40 35.17047701583362 38.0 34.0 40.0 25.0 41.0 41 35.03005131790598 38.0 33.0 40.0 24.0 41.0 42 35.066256720276144 38.0 33.0 40.0 25.0 41.0 43 34.82424252242121 38.0 33.0 40.0 24.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 3.0 11 10.0 12 14.0 13 20.0 14 30.0 15 77.0 16 174.0 17 394.0 18 901.0 19 2096.0 20 4418.0 21 8993.0 22 16885.0 23 29107.0 24 46578.0 25 69680.0 26 101066.0 27 140136.0 28 187877.0 29 245355.0 30 310156.0 31 384023.0 32 467042.0 33 564567.0 34 684304.0 35 834539.0 36 1036839.0 37 1326449.0 38 1863104.0 39 2107584.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 40.19122694530829 21.36762885623577 13.295063533191383 25.146080665264563 2 18.376578169151724 22.84872322541431 35.21271812170924 23.561980483724724 3 19.248293373129783 25.013129742367568 31.21666581515451 24.52191106934814 4 14.381829490968586 16.93469809165102 35.67935956572305 33.00411285165735 5 13.011457263850836 38.779819180993556 34.94623156024858 13.26249199490703 6 33.333585751571945 37.14528008407636 15.648390723495535 13.872743440856153 7 27.148952290173106 32.76397683720778 22.06937392576469 18.017696946854425 8 26.58205607308217 35.46924534583104 20.206757376835156 17.741941204251628 9 26.832985363608312 14.565238500248409 19.993134862943126 38.60864127320015 10 15.971920611716111 28.215454495174225 34.446213395720896 21.366411497388764 11 35.23535907916293 22.817896248627235 21.96140282298807 19.985341849221765 12 20.530555659132236 26.540148255136558 31.06437134774373 21.864924737987472 13 29.528812152040263 21.328721300645363 25.744426916820167 23.398039630494203 14 21.635351947548894 21.859135094337162 26.69735049994627 29.80816245816767 15 24.050831537569277 29.283183644525078 23.380306450439452 23.28567836746619 16 23.26216512926386 27.664364772088856 25.759734964683652 23.313735133963633 17 22.43838702445003 27.916492250456532 26.720499489044773 22.924621236048658 18 22.58077966753834 26.788230651351206 27.811291357969548 22.81969832314091 19 23.21435264163515 26.771849027181705 28.025191851440812 21.988606479742334 20 22.870127653015537 26.35383483852885 27.967698006052476 22.808339502403133 21 23.247758118657213 26.585171361470174 28.032956108653973 22.13411441121864 22 23.555050165249273 26.30534178020615 27.56566285045437 22.573945204090208 23 23.034892859481033 26.59722033840467 27.62420151564052 22.743685286473774 24 22.826762838654613 26.704319160432654 27.65162563895763 22.8172923619551 25 23.195210392678746 26.46707796780824 27.500979878016807 22.836731761496203 26 22.94107954424002 26.79552521893049 27.63696940527994 22.62642583154955 27 23.19948552689735 26.905605132308214 27.142980521970884 22.75192881882355 28 22.92445828250221 26.94355413762539 27.435175401759572 22.696812178112825 29 22.812336657042504 26.989257814652994 27.629233904574978 22.569171623729524 30 23.02174154973232 26.902480258417484 27.35658386485745 22.71919432699275 31 22.77810682678546 26.542860952409804 27.785448842603266 22.893583378201473 32 22.643967301549658 26.904349431450285 27.39860670883585 23.053076558164207 33 22.510700057062497 26.587337685087668 27.729028573520946 23.172933684328882 34 23.15684921074408 26.528166376721185 27.828104329762 22.486880082772736 35 22.813218523293873 26.3938830689444 28.04126673952288 22.751631668238847 36 22.697003888167476 26.25774017363755 27.984568490861328 23.060687447333652 37 22.629857441527715 25.87997551095762 28.362505692590435 23.127661354924232 38 22.45148082118235 25.48438181319561 28.600715020990812 23.463422344631223 39 22.22084403994049 25.51929221414665 28.90223659493803 23.35762715097483 40 22.381592920761154 25.358850069413418 29.292874587787438 22.96668242203799 41 21.624970848089816 25.419363348162427 29.514299700903557 23.4413661028442 42 21.496122520362242 25.711855378535812 29.36774694962943 23.42427515147251 43 21.169841592857498 25.148467455444905 29.58291272946136 24.098778222236238 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 15934.0 1 13606.5 2 11279.0 3 12333.0 4 13387.0 5 13387.0 6 18669.5 7 23952.0 8 23014.0 9 22076.0 10 29687.5 11 37299.0 12 37299.0 13 57722.5 14 78146.0 15 93324.0 16 108502.0 17 105682.0 18 102862.0 19 102862.0 20 117719.0 21 132576.0 22 127310.5 23 122045.0 24 143369.0 25 164693.0 26 164693.0 27 188025.0 28 211357.0 29 233903.5 30 256450.0 31 287764.0 32 319078.0 33 319078.0 34 355629.5 35 392181.0 36 433761.0 37 475341.0 38 513637.0 39 551933.0 40 551933.0 41 592227.0 42 632521.0 43 670313.5 44 708106.0 45 748233.0 46 788360.0 47 788360.0 48 820070.5 49 851781.0 50 849846.0 51 847911.0 52 822840.0 53 797769.0 54 797769.0 55 753849.0 56 709929.0 57 655541.0 58 601153.0 59 544366.5 60 487580.0 61 487580.0 62 421354.0 63 355128.0 64 302908.0 65 250688.0 66 202927.0 67 155166.0 68 155166.0 69 123158.0 70 91150.0 71 71754.5 72 52359.0 73 40615.0 74 28871.0 75 28871.0 76 22223.0 77 15575.0 78 12261.5 79 8948.0 80 6838.0 81 4728.0 82 4728.0 83 3593.0 84 2458.0 85 1953.0 86 1448.0 87 1131.0 88 814.0 89 814.0 90 622.0 91 430.0 92 321.0 93 212.0 94 191.0 95 170.0 96 170.0 97 103.0 98 36.0 99 37.5 100 39.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 1.0432421E7 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 47.08117219338301 #Duplication Level Percentage of deduplicated Percentage of total 1 76.07770793707222 35.81827667463199 2 11.555914871256167 10.881320358113742 3 4.478312105372295 6.325325501062339 4 2.1818683670603285 4.108996811714509 5 1.267808488843387 2.98449548857341 6 0.8430675014726833 2.381556372448835 7 0.6137143742571469 2.022607449236853 8 0.44915671525412604 1.691745972215505 9 0.3303058410963336 1.3996067563023022 >10 1.9911535259965234 17.225844408917013 >50 0.13668843245071516 4.431875667069883 >100 0.06753046873229532 5.758631727833639 >500 0.004420678021766034 1.4072623540314546 >1k 0.002166726321040048 1.772678119294967 >5k 1.0220377381354605E-4 0.3619202514530629 >10k+ 8.176301905083683E-5 1.4278560871004875 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 43793 0.41977792115559753 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 42698 0.4092817956637294 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 34550 0.33117911940095207 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 27327 0.2619430331655519 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 9.585502732299626E-6 7.668402185839701E-5 2 0.0 0.0 0.0 9.585502732299626E-6 7.668402185839701E-5 3 0.0 0.0 0.0 9.585502732299626E-6 7.668402185839701E-5 4 0.0 0.0 0.0 1.9171005464599252E-5 7.668402185839701E-5 5 0.0 0.0 0.0 1.9171005464599252E-5 8.626952459069663E-5 6 0.0 0.0 0.0 1.9171005464599252E-5 1.2461153551989514E-4 7 0.0 0.0 0.0 1.9171005464599252E-5 1.3419703825219478E-4 8 0.0 0.0 0.0 1.9171005464599252E-5 1.5336804371679402E-4 9 0.0 0.0 0.0 3.8342010929198505E-5 1.821245519136929E-4 10 0.0 0.0 0.0 7.668402185839701E-5 1.9171005464599253E-4 11 0.0 0.0 0.0 9.585502732299627E-5 2.0129555737829216E-4 12 0.0 0.0 0.0 1.4378254098449438E-4 2.6839407650438955E-4 13 0.0 0.0 0.0 1.5336804371679402E-4 3.1632159016588767E-4 14 0.0 0.0 0.0 1.9171005464599253E-4 3.450780983627865E-4 15 0.0 0.0 0.0 2.8756508196898877E-4 4.121766174888839E-4 16 0.0 0.0 0.0 5.080316448118801E-4 4.792751366149813E-4 17 0.0 0.0 0.0 8.147677322454682E-4 4.88860639347281E-4 18 0.0 0.0 0.0 9.393792677653633E-4 5.751301639379775E-4 19 0.0 0.0 0.0 0.0011790168360728541 5.847156666702772E-4 20 0.0 0.0 0.0 0.0014569964153095432 7.093272021901723E-4 21 0.0 0.0 0.0 0.0019171005464599252 7.18912704922472E-4 22 0.0 0.0 0.0 0.0032974129399110713 7.18912704922472E-4 23 9.585502732299626E-6 0.0 0.0 0.005521249573804584 7.860112240485694E-4 24 9.585502732299626E-6 0.0 0.0 0.010409855967277394 7.95596726780869E-4 25 9.585502732299626E-6 0.0 0.0 0.01411944552467735 7.95596726780869E-4 26 9.585502732299626E-6 0.0 0.0 0.021739920196855552 8.435242404423671E-4 27 9.585502732299626E-6 0.0 0.0 0.07993350728464658 8.914517541038652E-4 28 9.585502732299626E-6 0.0 0.0 0.14711829593533465 9.010372568361649E-4 29 9.585502732299626E-6 0.0 0.0 0.22406112636750378 9.202082623007642E-4 30 9.585502732299626E-6 0.0 0.0 0.32932911737361825 9.202082623007642E-4 31 9.585502732299626E-6 0.0 0.0 0.585252454823286 9.297937650330637E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 10435 0.0 25.582655 1 GTATCAA 17380 0.0 15.29603 2 TAAGGCG 1205 0.0 14.278008 5 ATTACGC 120 3.3053846E-5 13.874999 3 CGCCTTA 900 0.0 13.361112 33 TATACCG 390 0.0 12.807693 5 ACCCGAC 3265 0.0 12.748851 11 CTTATAC 8175 0.0 12.718042 37 ACGAACG 1060 0.0 12.566038 15 CGCGCTA 960 0.0 12.526041 24 TATACTG 1945 0.0 12.174808 5 GCACCCG 3560 0.0 11.900282 9 CCCGACT 3615 0.0 11.770401 12 CGATAAC 1160 0.0 11.6422415 10 CGAACGA 1115 0.0 11.614349 16 TCTTATA 11650 0.0 11.496996 37 AAGACGG 1440 0.0 11.434029 5 GGGTAAG 4035 0.0 11.416357 1 TATTAAG 2330 0.0 11.354077 2 TAATACT 2770 0.0 11.35379 4 >>END_MODULE