##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2727477.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 13355394 Sequences flagged as poor quality 0 Sequence length 43 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.47682157486331 31.0 31.0 34.0 30.0 34.0 2 31.682657209513998 31.0 31.0 34.0 30.0 34.0 3 31.779404710935523 31.0 31.0 34.0 30.0 34.0 4 35.51290729423632 37.0 35.0 37.0 33.0 37.0 5 35.38515000006739 37.0 35.0 37.0 33.0 37.0 6 35.36485340679579 37.0 35.0 37.0 33.0 37.0 7 35.25219944840264 37.0 35.0 37.0 32.0 37.0 8 35.17970724038542 37.0 35.0 37.0 32.0 37.0 9 36.78001876994419 39.0 37.0 39.0 32.0 39.0 10 36.62429614581195 39.0 35.0 39.0 32.0 39.0 11 36.65809986586693 39.0 35.0 39.0 32.0 39.0 12 36.48714197424651 38.0 35.0 39.0 32.0 39.0 13 36.57776678097254 39.0 35.0 39.0 32.0 39.0 14 37.610567909864734 39.0 36.0 41.0 32.0 41.0 15 37.57724189941532 39.0 36.0 41.0 32.0 41.0 16 37.498638452748004 39.0 36.0 41.0 32.0 41.0 17 37.496891368386436 39.0 36.0 41.0 32.0 41.0 18 37.37561886979898 39.0 36.0 41.0 32.0 41.0 19 37.44088575746998 39.0 36.0 41.0 32.0 41.0 20 37.338688398110904 39.0 36.0 41.0 31.0 41.0 21 37.1788479621043 39.0 36.0 41.0 31.0 41.0 22 37.01282021331606 39.0 36.0 40.0 31.0 41.0 23 37.173631942269914 39.0 36.0 41.0 31.0 41.0 24 37.177751626047126 39.0 36.0 41.0 31.0 41.0 25 37.13238868130734 39.0 36.0 41.0 31.0 41.0 26 36.95348433748941 39.0 36.0 41.0 30.0 41.0 27 36.9051275462184 39.0 36.0 41.0 30.0 41.0 28 36.66615503818158 39.0 36.0 41.0 30.0 41.0 29 36.545730436705945 39.0 35.0 40.0 30.0 41.0 30 36.49444224558257 39.0 35.0 40.0 30.0 41.0 31 36.34252430141709 39.0 35.0 40.0 30.0 41.0 32 36.296810636960615 39.0 35.0 40.0 30.0 41.0 33 36.05965140376989 38.0 35.0 40.0 29.0 41.0 34 36.02239941404948 38.0 35.0 40.0 29.0 41.0 35 35.824135925903796 38.0 35.0 40.0 27.0 41.0 36 35.709715714863975 38.0 34.0 40.0 27.0 41.0 37 35.65436751622603 38.0 34.0 40.0 27.0 41.0 38 35.59987664909025 38.0 34.0 40.0 26.0 41.0 39 35.549515574007025 38.0 34.0 40.0 26.0 41.0 40 35.385256249272764 38.0 34.0 40.0 26.0 41.0 41 35.252123898403894 38.0 34.0 40.0 25.0 41.0 42 35.26590978895868 38.0 34.0 40.0 25.0 41.0 43 35.019303062118574 38.0 33.0 40.0 25.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 1.0 10 3.0 11 5.0 12 15.0 13 18.0 14 46.0 15 94.0 16 232.0 17 428.0 18 1041.0 19 2345.0 20 5215.0 21 10562.0 22 19713.0 23 33889.0 24 54524.0 25 82460.0 26 119518.0 27 166321.0 28 225453.0 29 295939.0 30 377313.0 31 470486.0 32 573922.0 33 696526.0 34 851844.0 35 1043056.0 36 1302502.0 37 1699130.0 38 2456373.0 39 2866420.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 41.14124225762265 20.351252834622475 12.588771248530744 25.91873365922413 2 18.45303852510828 22.432666531590158 34.906443044660456 24.207851898641103 3 19.393647240957474 24.575358840031225 30.806054841961235 25.224939077050067 4 14.536381330270002 16.39780151749922 35.23623488756677 33.829582264664 5 13.386755942954585 38.3572884483977 34.72066043128342 13.535295177364294 6 34.08627255773959 36.52651505451655 15.484717261055719 13.90249512668814 7 27.941931177769817 32.06418320567705 21.664422629538297 18.329462987014836 8 27.208489693377825 34.97961947060491 19.83082640616967 17.981064429847596 9 27.226954143022663 14.042041739839348 19.314278560407878 39.416725556730114 10 15.937582972093523 27.989365195815264 34.251681380571775 21.82137045151944 11 36.03492341745964 22.36514325223202 21.389215473538258 20.21071785677008 12 20.975502482367798 25.999719663830213 30.498418841106446 22.526359012695547 13 30.094806637677628 20.810235924151694 25.07741067017566 24.017546767995015 14 22.09555180476143 21.15021840613613 26.05062044594117 30.70360934316127 15 24.55512731410245 28.713409727934646 22.745057165666545 23.986405792296356 16 23.936156432374815 27.06448046384854 24.99858109764489 24.000782006131754 17 23.083384885537633 27.229604757448563 26.024009475122934 23.663000881890866 18 23.13507935445409 26.413889399294398 27.013564706514835 23.43746653973668 19 23.806343714007987 26.321986457307062 27.25228473229618 22.61938509638877 20 23.5317505421405 25.964924733781718 27.13695305432397 23.366371669753807 21 23.78150730708506 26.218657420365133 27.111614977439082 22.888220295110724 22 24.183809178523674 25.875470240713227 26.64791469274512 23.29280588801798 23 23.615791492186602 26.15126143040033 26.700956931708642 23.531990145704423 24 23.44152482510063 26.20849673173251 26.74743253549839 23.602545907668468 25 23.76544638069083 25.969544589998616 26.66533836440917 23.59967066490139 26 23.62569760203256 26.224557658126745 26.821252896020887 23.32849184381981 27 23.842973108842763 26.421481837226217 26.380052883501605 23.355492170429415 28 23.52099084459807 26.548127295982432 26.522437301363027 23.40844455805647 29 23.448967510804998 26.565558455257854 26.77833390763313 23.207140126304022 30 23.652271134793924 26.57663263247793 26.46106883855317 23.310027394174966 31 23.494177708272776 26.20780787148623 26.879169569987976 23.418844850253016 32 23.27249948597548 26.573053554241827 26.57808522908422 23.576361730698473 33 23.1772196312591 26.331256120186346 26.78198786198296 23.709536386571596 34 23.636135332285964 26.259809332468965 27.035039175931463 23.06901615931361 35 23.409530261705495 26.26871210239099 26.993220866415474 23.328536769488043 36 23.31768722060914 26.21631379800551 26.985718279820126 23.480280701565228 37 23.264779758650324 25.882965339697208 27.281778433492864 23.570476468159608 38 23.107637258773497 25.719660535660722 27.373868565764514 23.798833639801266 39 22.921180760372923 25.727208047924304 27.687958887622482 23.663652304080284 40 23.20555275269303 25.405472874854908 27.97037661337434 23.418597759077716 41 22.59666019587292 25.52693690654128 28.14712916743602 23.72927373014978 42 22.459584494474665 25.59658666752924 28.07483627963353 23.86899255836256 43 22.190951461259772 25.107735496234707 28.276020909604014 24.425292132901507 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 6445.0 1 5880.0 2 5315.0 3 6888.0 4 8461.0 5 8461.0 6 12466.5 7 16472.0 8 16464.0 9 16456.0 10 22555.5 11 28655.0 12 28655.0 13 49125.5 14 69596.0 15 94738.5 16 119881.0 17 112721.5 18 105562.0 19 105562.0 20 121407.0 21 137252.0 22 131581.0 23 125910.0 24 150721.0 25 175532.0 26 175532.0 27 207122.5 28 238713.0 29 267797.5 30 296882.0 31 337811.0 32 378740.0 33 378740.0 34 424009.0 35 469278.0 36 523544.0 37 577810.0 38 632867.0 39 687924.0 40 687924.0 41 743731.5 42 799539.0 43 852247.5 44 904956.0 45 958258.5 46 1011561.0 47 1011561.0 48 1063825.5 49 1116090.0 50 1122218.0 51 1128346.0 52 1101275.5 53 1074205.0 54 1074205.0 55 1022939.0 56 971673.0 57 903530.5 58 835388.0 59 757872.5 60 680357.0 61 680357.0 62 587384.5 63 494412.0 64 419385.0 65 344358.0 66 281680.0 67 219002.0 68 219002.0 69 175822.0 70 132642.0 71 105176.5 72 77711.0 73 60943.0 74 44175.0 75 44175.0 76 34559.5 77 24944.0 78 19717.0 79 14490.0 80 11113.0 81 7736.0 82 7736.0 83 5923.5 84 4111.0 85 3180.5 86 2250.0 87 1771.0 88 1292.0 89 1292.0 90 962.0 91 632.0 92 477.0 93 322.0 94 282.0 95 242.0 96 242.0 97 141.0 98 40.0 99 38.0 100 36.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 1.3355394E7 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 45.908791030496886 #Duplication Level Percentage of deduplicated Percentage of total 1 74.3469261268127 34.13177495315634 2 12.223462418809577 11.223287637085216 3 4.763420105500367 6.560485746416514 4 2.3944174251774006 4.396992368489988 5 1.4505228870957878 3.3295876054316773 6 0.940536099514775 2.590732514955746 7 0.6644744732688324 2.1353653816878824 8 0.4883722736061762 1.7936464523259674 9 0.3581873052843206 1.47995515332672 >10 2.1394343647741176 17.91795518734135 >50 0.15097397254877823 4.768816279853296 >100 0.07385644831859049 6.16553042641995 >500 0.004125128702122163 1.2773710550620556 >1k 0.0011602422324466925 0.886673331001313 >5k 6.536417698767932E-5 0.17362572920014235 >10k+ 6.536417698767932E-5 1.1682001782456348 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 51525 0.38579917597339325 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 43258 0.3238990927560804 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 36102 0.2703177457737301 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 24834 0.1859473408272343 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 1.0482655921644842E-4 2 0.0 0.0 0.0 0.0 1.0482655921644842E-4 3 0.0 0.0 0.0 0.0 1.0482655921644842E-4 4 0.0 0.0 0.0 7.487611372603459E-6 1.0482655921644842E-4 5 0.0 0.0 0.0 1.4975222745206917E-5 1.272893933342588E-4 6 0.0 0.0 0.0 1.4975222745206917E-5 1.4975222745206918E-4 7 0.0 0.0 0.0 1.4975222745206917E-5 1.5723983882467264E-4 8 0.0 0.0 0.0 1.4975222745206917E-5 1.647274501972761E-4 9 0.0 0.0 0.0 2.2462834117810378E-5 1.9467789568768993E-4 10 0.0 0.0 0.0 4.4925668235620756E-5 1.9467789568768993E-4 11 0.0 0.0 0.0 5.990089098082767E-5 2.0216550706029338E-4 12 0.0 0.0 0.0 8.236372509863804E-5 2.4709117529591413E-4 13 0.0 0.0 0.0 9.733894784384497E-5 2.545787866685176E-4 14 0.0 0.0 0.0 1.0482655921644842E-4 2.920168435315349E-4 15 0.0 1.4975222745206917E-5 0.0 1.272893933342588E-4 3.5940534588496605E-4 16 0.0 1.4975222745206917E-5 0.0 2.0216550706029338E-4 4.0433101412058677E-4 17 0.0 1.4975222745206917E-5 0.0 2.9950445490413836E-4 4.267938482383972E-4 18 0.0 1.4975222745206917E-5 0.0 3.444301231397591E-4 5.091575733370352E-4 19 0.0 1.4975222745206917E-5 0.0 4.193062368657937E-4 5.166451847096387E-4 20 0.0 1.4975222745206917E-5 0.0 5.54083241572656E-4 6.064965211808801E-4 21 0.0 1.4975222745206917E-5 0.0 7.412735258877424E-4 6.139841325534836E-4 22 0.0 1.4975222745206917E-5 0.0 0.0012204806537343639 6.214717439260871E-4 23 0.0 1.4975222745206917E-5 0.0 0.0017221506156987955 6.589098007891044E-4 24 0.0 1.4975222745206917E-5 0.0 0.0030549454400222113 6.589098007891044E-4 25 0.0 1.4975222745206917E-5 0.0 0.004335326984737402 6.738850235343113E-4 26 0.0 1.4975222745206917E-5 0.0 0.007487611372603459 6.963478576521217E-4 27 0.0 1.4975222745206917E-5 0.0 0.029800693262961767 7.33785914515139E-4 28 7.487611372603459E-6 1.4975222745206917E-5 0.0 0.057152937607082205 7.33785914515139E-4 29 7.487611372603459E-6 1.4975222745206917E-5 0.0 0.09108679234772107 7.412735258877424E-4 30 7.487611372603459E-6 1.4975222745206917E-5 0.0 0.1395990264308189 7.412735258877424E-4 31 7.487611372603459E-6 1.4975222745206917E-5 0.0 0.2844169179883424 7.412735258877424E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 17605 0.0 17.591024 1 TTCGCGA 110 2.4594244E-4 13.454545 22 TTATACT 2695 0.0 12.150278 4 TATACTG 2240 0.0 12.140625 5 CTTATAC 6385 0.0 11.995301 37 TATACCG 670 0.0 11.873135 5 GTATCAA 26025 0.0 11.828627 2 GTACATG 32025 0.0 11.801873 1 TAATACT 3070 0.0 11.690555 4 TACATGG 32730 0.0 11.496792 2 TAACGCC 925 0.0 11.4 4 CGTATAC 510 0.0 11.245098 3 ACATGGG 33155 0.0 11.209923 3 TACGGAT 2510 0.0 11.203187 27 CTCTTAT 11520 0.0 11.032552 37 TAGTACT 1210 0.0 11.008265 4 GTTACGG 1935 0.0 10.994832 25 CATGGGA 21805 0.0 10.851411 4 TATACTA 1810 0.0 10.834254 5 TAGGCCG 445 0.0 10.80899 5 >>END_MODULE