##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2727476.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 7054456 Sequences flagged as poor quality 0 Sequence length 43 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.426217556676235 31.0 31.0 34.0 30.0 34.0 2 31.639488147633212 31.0 31.0 34.0 30.0 34.0 3 31.734624611734766 31.0 31.0 34.0 30.0 34.0 4 35.48397154932996 37.0 35.0 37.0 33.0 37.0 5 35.339207020357065 37.0 35.0 37.0 33.0 37.0 6 35.314963336648496 37.0 35.0 37.0 33.0 37.0 7 35.20893092252613 37.0 35.0 37.0 32.0 37.0 8 35.10563408432911 37.0 35.0 37.0 32.0 37.0 9 36.68648468429033 39.0 35.0 39.0 32.0 39.0 10 36.54316023801127 38.0 35.0 39.0 32.0 39.0 11 36.567125941390806 38.0 35.0 39.0 32.0 39.0 12 36.3929132168377 38.0 35.0 39.0 32.0 39.0 13 36.48037538259506 38.0 35.0 39.0 32.0 39.0 14 37.51336474421274 39.0 36.0 41.0 32.0 41.0 15 37.48069220362279 39.0 36.0 41.0 32.0 41.0 16 37.41008987794381 39.0 36.0 41.0 32.0 41.0 17 37.38616826017485 39.0 36.0 41.0 32.0 41.0 18 37.239392661886335 39.0 36.0 41.0 31.0 41.0 19 37.291711366546195 39.0 36.0 41.0 31.0 41.0 20 37.18539317560418 39.0 36.0 40.0 31.0 41.0 21 36.99959458248801 39.0 36.0 40.0 31.0 41.0 22 36.802302969924256 39.0 36.0 40.0 30.0 41.0 23 37.00093288554071 39.0 36.0 40.0 31.0 41.0 24 36.99089058036509 39.0 36.0 41.0 31.0 41.0 25 36.94147316249474 39.0 36.0 41.0 30.0 41.0 26 36.77558737342752 39.0 36.0 40.0 30.0 41.0 27 36.653553441966324 39.0 36.0 40.0 30.0 41.0 28 36.41085974595348 39.0 35.0 40.0 29.0 41.0 29 36.34635654400566 39.0 35.0 40.0 29.0 41.0 30 36.33419926355767 39.0 35.0 40.0 29.0 41.0 31 36.19937327555803 38.0 35.0 40.0 29.0 41.0 32 36.156092829836915 38.0 35.0 40.0 29.0 41.0 33 35.95348046681417 38.0 35.0 40.0 27.0 41.0 34 35.93893505041353 38.0 35.0 40.0 27.0 41.0 35 35.74943227372883 38.0 34.0 40.0 27.0 41.0 36 35.650408479406494 38.0 34.0 40.0 27.0 41.0 37 35.61988181654262 38.0 34.0 40.0 27.0 41.0 38 35.59322462284831 38.0 34.0 40.0 26.0 41.0 39 35.56981133626746 38.0 34.0 40.0 26.0 41.0 40 35.40908370539132 38.0 34.0 40.0 26.0 41.0 41 35.2803406811241 38.0 34.0 40.0 25.0 41.0 42 35.33544967889799 38.0 34.0 40.0 26.0 41.0 43 35.100211554228984 38.0 33.0 40.0 25.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 1.0 11 0.0 12 5.0 13 4.0 14 12.0 15 35.0 16 101.0 17 222.0 18 530.0 19 1213.0 20 2930.0 21 5772.0 22 10979.0 23 19055.0 24 31001.0 25 46396.0 26 66923.0 27 93746.0 28 125504.0 29 163436.0 30 208211.0 31 257745.0 32 313327.0 33 376576.0 34 456494.0 35 555953.0 36 687924.0 37 882795.0 38 1297831.0 39 1449735.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 40.57231344273747 20.4731732680734 12.571543432973428 26.382969856215706 2 18.917688337697477 22.282455231133344 34.45986480034747 24.33999163082171 3 19.5485945337245 24.271736899344187 30.634764750109717 25.544903816821595 4 15.037715168965546 16.518126982434932 35.00169254723539 33.44246530136413 5 13.763187409489833 37.92686494890605 34.7010456936722 13.608901947931917 6 34.48523883344088 36.30231728711612 15.313271498184978 13.89917238125803 7 28.22265813267529 31.741426978919424 21.4400798587446 18.595835029660684 8 27.046394505827237 34.798487650925885 19.837532475927272 18.317585367319605 9 27.254844314005215 14.0836940509658 19.008907277896412 39.652554357132566 10 15.974711586548985 27.64403095008318 34.38652108681378 21.99473637655405 11 36.5015247100556 22.042847811369153 21.321899236454236 20.13372824212101 12 21.093093500051598 25.567456937856015 30.061141496948878 23.27830806514351 13 30.403081399898163 20.600270240540162 24.504001442492516 24.492646917069155 14 22.432984201758437 20.97254557970168 25.11640869260507 31.478061525934812 15 25.096307922255097 28.544851651211662 21.89434592830404 24.464494498229207 16 24.516348248539646 26.861631853682265 24.205778588738806 24.41624130903928 17 23.57087491934176 26.840652206208386 25.25527127818219 24.333201596267664 18 23.676269297023044 26.44641911438671 25.974972414598657 23.90233917399159 19 24.467258708538264 26.132957665339468 26.102508825627375 23.297274800494893 20 24.178235713710595 25.827321057782488 25.913649472050004 24.080793756456913 21 24.345619279502202 25.997766518070282 26.008369745307082 23.648244457120434 22 24.87546878171754 25.612123741362907 25.450141017252076 24.062266459667477 23 24.396012959751964 25.847634459694696 25.560936236614136 24.195416343939208 24 24.16264273248001 25.889239368705397 25.573155463723925 24.374962435090673 25 24.56030628017242 25.54301848363644 25.568633499167053 24.32804173702409 26 24.439389798447962 25.80967263811696 25.700578471252776 24.0503590921823 27 24.67599202546589 26.032737322339244 25.22526187703205 24.06600877516282 28 24.29104384519515 26.128308121845258 25.314978220857853 24.26566981210174 29 24.223753043466427 26.09953198375608 25.66006507092822 24.01664990184927 30 24.5020877584324 26.004967640311317 25.343924464196814 24.14902013705947 31 24.373870926404532 25.67521861359685 25.79009635895383 24.160814101044785 32 24.191447221444147 26.043624058325687 25.49025750532713 24.274671214903034 33 24.011560919793105 25.84285733726314 25.637554476206244 24.508027266737507 34 24.471100252095983 25.766295799420963 25.98203178246487 23.78057216601819 35 24.279533389959482 25.718552925980404 25.89479614019848 24.10711754386164 36 24.173075854467022 25.7272282937196 25.950633188441465 24.149062663371918 37 24.13046448939507 25.479243190403345 26.259771129056585 24.130521191145 38 24.11261761360479 25.33979941188945 26.169771276481136 24.377811698024622 39 23.657345087984105 25.487620873955414 26.57837826190992 24.276655776150562 40 24.15117480355679 24.984236913519624 26.75409698494115 24.11049129798244 41 23.588792672319453 25.15342075987149 26.881307360907776 24.376479206901283 42 23.435357737010477 25.132639568522364 26.902485464506405 24.529517229960753 43 23.27898848614266 24.56791849010044 27.06239857474481 25.090694449012084 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 677.0 1 663.5 2 650.0 3 854.0 4 1058.0 5 1058.0 6 1604.5 7 2151.0 8 2222.5 9 2294.0 10 3325.0 11 4356.0 12 4356.0 13 7338.5 14 10321.0 15 14182.0 16 18043.0 17 19761.5 18 21480.0 19 21480.0 20 27910.0 21 34340.0 22 39114.0 23 43888.0 24 56654.5 25 69421.0 26 69421.0 27 86538.0 28 103655.0 29 120607.0 30 137559.0 31 163590.5 32 189622.0 33 189622.0 34 218081.0 35 246540.0 36 280531.5 37 314523.0 38 346531.5 39 378540.0 40 378540.0 41 412912.5 42 447285.0 43 477725.0 44 508165.0 45 536598.5 46 565032.0 47 565032.0 48 594206.5 49 623381.0 50 629584.5 51 635788.0 52 620646.5 53 605505.0 54 605505.0 55 571627.5 56 537750.0 57 496500.5 58 455251.0 59 410704.0 60 366157.0 61 366157.0 62 316562.5 63 266968.0 64 226298.0 65 185628.0 66 151331.5 67 117035.0 68 117035.0 69 93658.5 70 70282.0 71 55450.5 72 40619.0 73 31952.0 74 23285.0 75 23285.0 76 18142.5 77 13000.0 78 10003.0 79 7006.0 80 5331.0 81 3656.0 82 3656.0 83 2710.5 84 1765.0 85 1339.0 86 913.0 87 701.0 88 489.0 89 489.0 90 349.5 91 210.0 92 159.5 93 109.0 94 78.5 95 48.0 96 48.0 97 28.0 98 8.0 99 5.5 100 3.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 7054456.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 52.96453404323884 #Duplication Level Percentage of deduplicated Percentage of total 1 76.72660648993912 40.6378896145857 2 11.922759098596627 12.629667603339131 3 4.262143052839014 6.772272624577376 4 2.035047635800127 4.3114139914379415 5 1.20446287261602 3.1896907410244224 6 0.7834013808597119 2.4895493463638716 7 0.5240457898405019 1.9429088753356274 8 0.40325006378892625 1.7086361385189455 9 0.31466115687454904 1.4999293399830271 >10 1.672721798584732 16.085005414262753 >50 0.10556601452459355 3.822717135140851 >100 0.043693656445984864 4.026455465818995 >500 0.0014526973231320719 0.5098838488478658 >1k 1.0759540980202406E-4 0.09867369594457602 >5k 8.06965571787871E-5 0.27530616481883324 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 7302 0.10350904449613124 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 1.417543748235158E-5 2 0.0 0.0 0.0 0.0 1.417543748235158E-5 3 0.0 0.0 0.0 0.0 1.417543748235158E-5 4 0.0 0.0 0.0 1.417543748235158E-5 1.417543748235158E-5 5 0.0 0.0 0.0 1.417543748235158E-5 1.417543748235158E-5 6 0.0 0.0 0.0 1.417543748235158E-5 8.505262489410948E-5 7 0.0 0.0 0.0 1.417543748235158E-5 1.1340349985881264E-4 8 0.0 0.0 0.0 1.417543748235158E-5 1.2757893734116423E-4 9 0.0 0.0 0.0 4.252631244705474E-5 1.8428068727057055E-4 10 0.0 0.0 0.0 5.670174992940632E-5 1.8428068727057055E-4 11 0.0 0.0 0.0 5.670174992940632E-5 1.8428068727057055E-4 12 0.0 0.0 0.0 5.670174992940632E-5 2.2680699971762528E-4 13 0.0 0.0 0.0 7.08771874117579E-5 2.2680699971762528E-4 14 0.0 0.0 0.0 8.505262489410948E-5 3.2603506209408635E-4 15 0.0 0.0 0.0 9.922806237646106E-5 3.5438593705878953E-4 16 0.0 0.0 0.0 1.1340349985881264E-4 3.685613745411411E-4 17 0.0 0.0 0.0 1.1340349985881264E-4 3.685613745411411E-4 18 0.0 0.0 0.0 1.1340349985881264E-4 3.8273681202349267E-4 19 0.0 0.0 0.0 1.1340349985881264E-4 3.8273681202349267E-4 20 0.0 0.0 0.0 1.2757893734116423E-4 3.9691224950584423E-4 21 0.0 0.0 0.0 1.7010524978821896E-4 4.1108768698819585E-4 22 0.0 0.0 0.0 3.5438593705878953E-4 4.1108768698819585E-4 23 0.0 0.0 0.0 5.670174992940632E-4 5.528420618117117E-4 24 0.0 0.0 0.0 9.497543113175559E-4 5.528420618117117E-4 25 0.0 0.0 0.0 0.0013608419983057517 5.528420618117117E-4 26 0.0 0.0 0.0 0.0025515787468232843 5.953683742587663E-4 27 0.0 0.0 0.0 0.010121262362399028 5.953683742587663E-4 28 0.0 0.0 0.0 0.020072419475009838 5.953683742587663E-4 29 0.0 0.0 0.0 0.033014593896396834 5.953683742587663E-4 30 0.0 0.0 0.0 0.05247746955966555 5.953683742587663E-4 31 0.0 0.0 0.0 0.12470132353224685 6.095438117411179E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 3190 0.0 24.41536 1 GTATCAA 4935 0.0 15.594731 2 ATACCGT 555 0.0 13.666667 6 TATACCG 320 0.0 13.296875 5 TATACTG 1210 0.0 12.690083 5 GGGTAAG 2840 0.0 12.572183 1 TACCGTC 450 0.0 12.333332 7 GTATTAC 630 0.0 11.746032 1 TTATACT 1365 0.0 11.520146 4 TATACAG 1465 0.0 11.491467 5 TCTTATA 2490 0.0 11.441767 37 TCGTTAC 810 0.0 11.419753 23 CCGATAA 475 0.0 11.294737 9 ATCAACG 7140 0.0 11.2710085 2 TTACACT 1235 0.0 11.2348175 4 TCAACGC 7235 0.0 11.174153 3 TACACCG 515 0.0 11.135922 5 TTTATAC 1515 0.0 11.112211 3 GTTACGG 1235 0.0 11.08502 25 ATAGTAC 685 0.0 11.072993 3 >>END_MODULE