##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2727474.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 7341091 Sequences flagged as poor quality 0 Sequence length 43 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.32394326674332 31.0 31.0 34.0 30.0 34.0 2 31.6039760302658 31.0 31.0 34.0 30.0 34.0 3 31.70789968412052 31.0 31.0 34.0 30.0 34.0 4 35.482174107363605 37.0 35.0 37.0 33.0 37.0 5 35.29505927661161 37.0 35.0 37.0 33.0 37.0 6 35.28921613967188 37.0 35.0 37.0 32.0 37.0 7 35.21816144221615 37.0 35.0 37.0 32.0 37.0 8 35.193227954809444 37.0 35.0 37.0 32.0 37.0 9 36.82379063275472 39.0 37.0 39.0 32.0 39.0 10 36.60649064287583 39.0 35.0 39.0 32.0 39.0 11 36.717163293575844 39.0 35.0 39.0 32.0 39.0 12 36.5459087756847 39.0 35.0 39.0 32.0 39.0 13 36.64870521289002 39.0 35.0 39.0 32.0 39.0 14 37.7607489132065 40.0 37.0 41.0 32.0 41.0 15 37.717345827752304 40.0 37.0 41.0 32.0 41.0 16 37.6897210509991 40.0 37.0 41.0 32.0 41.0 17 37.626558232284545 39.0 36.0 41.0 32.0 41.0 18 37.6093004432175 39.0 36.0 41.0 32.0 41.0 19 37.60117971565807 39.0 36.0 41.0 32.0 41.0 20 37.56104140379134 39.0 36.0 41.0 32.0 41.0 21 37.50233963861775 39.0 36.0 41.0 32.0 41.0 22 37.41737229520789 39.0 36.0 41.0 31.0 41.0 23 37.321275134717716 39.0 36.0 41.0 31.0 41.0 24 37.22802128457473 39.0 36.0 41.0 31.0 41.0 25 37.13823149719844 39.0 36.0 41.0 31.0 41.0 26 36.953309800954656 39.0 36.0 41.0 31.0 41.0 27 36.866916511455855 39.0 36.0 40.0 30.0 41.0 28 36.6889207612329 39.0 35.0 40.0 30.0 41.0 29 36.55967021795534 39.0 35.0 40.0 30.0 41.0 30 36.6900067033633 39.0 35.0 40.0 30.0 41.0 31 36.71599085204093 39.0 35.0 40.0 30.0 41.0 32 36.69644961491419 39.0 35.0 40.0 30.0 41.0 33 36.57786397144512 39.0 35.0 40.0 30.0 41.0 34 36.549677289111386 39.0 35.0 40.0 30.0 41.0 35 36.44220225576825 39.0 35.0 40.0 30.0 41.0 36 36.365129515490274 38.0 35.0 40.0 30.0 41.0 37 36.29665767663144 38.0 35.0 40.0 30.0 41.0 38 36.16607027484062 38.0 35.0 40.0 29.0 41.0 39 36.04770571567632 38.0 35.0 40.0 29.0 41.0 40 35.92969015095985 38.0 35.0 40.0 28.0 41.0 41 35.78439812284032 38.0 34.0 40.0 28.0 41.0 42 35.651386421990956 38.0 34.0 40.0 27.0 41.0 43 35.50028177010747 38.0 34.0 40.0 27.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 11 3.0 12 9.0 13 10.0 14 20.0 15 58.0 16 216.0 17 433.0 18 609.0 19 1102.0 20 2278.0 21 4352.0 22 8011.0 23 14086.0 24 23089.0 25 36443.0 26 53613.0 27 78313.0 28 108296.0 29 147583.0 30 193043.0 31 244777.0 32 302745.0 33 371602.0 34 459567.0 35 568158.0 36 715880.0 37 926419.0 38 1354418.0 39 1725958.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 42.59907689470135 19.189777105337612 12.09982276476344 26.111323235197602 2 19.4096626782041 21.59782517339725 33.15289239705652 25.839619751342134 3 20.33306765983421 23.799718597685278 29.28553807601622 26.58167566646429 4 14.804189186593655 15.876781802595827 34.17261821165274 35.146410799157785 5 14.81757956685185 36.97637040597917 33.20352519809385 15.002524829075133 6 34.7092550684905 34.81584685437083 15.87338993618251 14.60150814095616 7 29.124322256732682 31.085515763256446 21.0033222582311 18.786839721779774 8 28.222630668929185 32.55836223798343 19.949459828246237 19.26954726484115 9 27.479784680505936 13.955269046521831 19.09585373618172 39.46909253679051 10 17.79924809541252 25.70796357108228 31.72995675983311 24.762831573672088 11 37.41170079488185 21.319147249366612 20.608081278382194 20.661070677369345 12 21.74642706377022 25.39675642217213 28.72227030015021 24.13454621390744 13 30.026681320256078 19.086781515172607 25.32980452088116 25.556732643690154 14 23.133809402444406 20.638635320008973 23.919387458894054 32.308167818652564 15 25.92564238748709 27.476433679953022 21.343680387560923 25.254243544998968 16 26.180141344113565 25.21686490468515 23.846850556681563 24.756143194519726 17 24.71842400536923 26.037778308428543 24.00068327718591 25.243114409016314 18 25.483964168268724 23.735014318716388 25.625564374559584 25.155457138455304 19 25.058332610234636 25.058291744374234 24.936034712006702 24.947340933384424 20 24.82009826604792 23.690443286971924 25.16151890774818 26.327939539231977 21 26.120858602624597 24.49285807790695 25.219780002727116 24.166503316741338 22 25.969736650860202 23.96955711351351 25.277360000032694 24.78334623559359 23 24.64392554185747 23.877731525191557 25.739620990939905 25.73872194201107 24 24.419912517090445 24.88442113031973 25.625864057535864 25.069802295053968 25 25.277673304962438 24.10893694138923 24.90558964600766 25.707800107640676 26 24.95115508035522 25.388256323208637 25.263901510007162 24.39668708642898 27 26.5314379020775 24.048005943530736 24.827985377105392 24.592570777286372 28 24.72503065280079 24.66152510573701 25.589779502801424 25.023664738660777 29 24.609748060608432 24.5883752156185 25.846253642680633 24.955623081092444 30 24.229028083155487 25.143333599869557 26.144887728540624 24.482750588434335 31 25.3124637741175 24.908273170840683 24.832235426587136 24.94702762845468 32 25.318116884806358 24.388527536302167 24.535998804537364 25.75735677435411 33 24.1275172859184 24.26655656495744 25.40300889881354 26.202917250310616 34 25.943405414808236 24.504859018911493 25.322244336706902 24.22949122957337 35 25.6006498216682 23.942435804160446 26.134889214695743 24.322025159475615 36 24.125841785641946 25.416453766885606 25.385218627585466 25.072485819886992 37 25.650669634799517 24.593715021377612 25.520988637792392 24.23462670603048 38 24.567492760953378 23.922792947260838 25.797705000523763 25.71200929126202 39 25.570231999576087 24.197670346274144 24.98995040382962 25.24214725032015 40 25.25639581364677 24.136289823951234 25.94104881685842 24.66626554554357 41 24.151355704485887 25.253385361930537 26.0219632204532 24.573295713130378 42 25.897022663252645 24.65570853160654 26.036960991220514 23.4103078139203 43 24.67853892561746 23.553569898534153 25.777857814322147 25.990033361526237 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 708.0 1 944.0 2 1180.0 3 2415.5 4 3651.0 5 3651.0 6 4845.5 7 6040.0 8 5071.5 9 4103.0 10 5735.5 11 7368.0 12 7368.0 13 12713.5 14 18059.0 15 24688.5 16 31318.0 17 30101.0 18 28884.0 19 28884.0 20 35504.5 21 42125.0 22 39845.5 23 37566.0 24 45853.0 25 54140.0 26 54140.0 27 66434.5 28 78729.0 29 91796.5 30 104864.0 31 121312.5 32 137761.0 33 137761.0 34 162894.0 35 188027.0 36 225247.0 37 262467.0 38 298441.0 39 334415.0 40 334415.0 41 370635.0 42 406855.0 43 429445.5 44 452036.0 45 497982.5 46 543929.0 47 543929.0 48 599448.0 49 654967.0 50 651131.0 51 647295.0 52 634280.5 53 621266.0 54 621266.0 55 598459.0 56 575652.0 57 548355.0 58 521058.0 59 488792.5 60 456527.0 61 456527.0 62 395211.5 63 333896.0 64 311319.0 65 288742.0 66 250286.5 67 211831.0 68 211831.0 69 165483.5 70 119136.0 71 101117.0 72 83098.0 73 57287.0 74 31476.0 75 31476.0 76 24634.0 77 17792.0 78 15757.5 79 13723.0 80 10734.0 81 7745.0 82 7745.0 83 6629.0 84 5513.0 85 4841.0 86 4169.0 87 2795.5 88 1422.0 89 1422.0 90 1086.0 91 750.0 92 552.5 93 355.0 94 383.5 95 412.0 96 412.0 97 213.5 98 15.0 99 20.5 100 26.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 7341091.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 41.6735209518769 #Duplication Level Percentage of deduplicated Percentage of total 1 78.94382361593657 32.89867087480007 2 10.83185371578073 9.028029655445078 3 3.6598929081724028 4.5756187137104485 4 1.8165428899002678 3.0280695272896727 5 1.0766545956579845 2.2433993925043785 6 0.6986322913863956 1.7468680459649235 7 0.4851157430349671 1.4151536757017122 8 0.35977342755013186 1.1994420376751187 9 0.2760094438385844 1.0352056806650825 >10 1.6368414738352717 12.569880124603197 >50 0.11362029219651071 3.254235642337154 >100 0.07408072539245657 6.345979286746789 >500 0.01204897573868698 3.5356442904600134 >1k 0.013514243869577825 11.734885369151659 >5k 0.0012700132790714512 3.639851569374915 >10k+ 3.256444305311413E-4 1.7490661135697596 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 16780 0.2285763791785172 No Hit GGGTAGGCACACGCTGAGCCAGTCAGTGTAGCGCGCGTGCAGC 15167 0.20660416823602923 No Hit TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 14606 0.19896225234096676 No Hit GTGTAGCGCGCGTGCAGCCCCGGACATCTAAGGGCATCACAGA 13464 0.18340598148149914 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 12265 0.16707325927440486 No Hit GTACATGGGGAATAATTGCAATCCCCGATCCCCATCACGAATG 12231 0.16661011285652227 No Hit GCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAATGTTTT 11813 0.16091613630726004 No Hit GGATTGACAGATTGATAGCTCTTTCTCGATTCCGTGGGTGGTG 11284 0.15371012292314587 No Hit GTGCATGGCCGTTCTTAGTTGGTGGAGCGATTTGTCTGGTTAA 10734 0.1462180485162219 No Hit GCCATGCACCACCACCCACGGAATCGAGAAAGAGCTATCAATC 10541 0.14358901149706496 No Hit CCTTAGATGTCCGGGGCTGCACGCGCGCTACACTGACTGGCTC 9909 0.13497993690583593 No Hit CATCTAAGGGCATCACAGACCTGTTATTGCTCAATCTCGGGTG 8948 0.12188923962391966 No Hit AGTCAGTGTAGCGCGCGTGCAGCCCCGGACATCTAAGGGCATC 8891 0.121112788276293 No Hit GAGTATGGTTGCAAAGCTGAAACTTAAAGGAATTGACGGAAGG 8602 0.1171760437242911 No Hit GCGCTACACTGACTGGCTCAGCGTGTGCCTACCCTACGCCGGC 8515 0.1159909337726504 No Hit GTTCAAAGCAGGCCCGAGCCGCCTGGATACCGCAGCTAGGAAT 8153 0.11105978661754771 No Hit GGTTAATTCCGATAACGAACGAGACTCTGGCATGCTAACTAGT 8031 0.10939790829455731 No Hit CTTATACACATCTCCGAGCCCACGAGACGTAGAGGAATCTCGT 7709 0.10501163927813999 No Hit ACCCCCGAGCGGTCGGCGTCCCCCAACTTCTTAGAGGGACAAG 7687 0.10471195630186304 No Hit TCGTAGTTCCGACCATAAACGATGCCGACTGGCGATGCGGCGG 7661 0.10435778551171754 No Hit GAATTAACCAGACAAATCGCTCCACCAACTAAGAACGGCCATG 7587 0.10334976095514958 No Hit GATTAAGAGGGACGGCCGGGGGCATTCGTATTGCGCCGCTAGA 7583 0.10329527314128105 No Hit GTCTTGCGCCGGTCCAAGAATTTCACCTCTAGCGGCGCAATAC 7473 0.10179685825989625 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 1.3621953467134517E-5 4.086586040140355E-5 2 0.0 0.0 0.0 1.3621953467134517E-5 4.086586040140355E-5 3 0.0 0.0 0.0 2.7243906934269035E-5 4.086586040140355E-5 4 0.0 0.0 0.0 8.17317208028071E-5 4.086586040140355E-5 5 0.0 0.0 0.0 1.2259758120421066E-4 4.086586040140355E-5 6 0.0 0.0 0.0 1.2259758120421066E-4 5.448781386853807E-5 7 0.0 0.0 0.0 1.2259758120421066E-4 5.448781386853807E-5 8 0.0 0.0 0.0 1.3621953467134518E-4 5.448781386853807E-5 9 0.0 0.0 0.0 1.7708539507274872E-4 5.448781386853807E-5 10 0.0 0.0 0.0 1.9070734853988324E-4 5.448781386853807E-5 11 0.0 0.0 0.0 2.0432930200701776E-4 5.448781386853807E-5 12 0.0 0.0 0.0 2.0432930200701776E-4 6.810976733567259E-5 13 0.0 0.0 0.0 2.0432930200701776E-4 1.0897562773707614E-4 14 0.0 0.0 0.0 2.0432930200701776E-4 1.7708539507274872E-4 15 0.0 0.0 0.0 2.0432930200701776E-4 1.7708539507274872E-4 16 1.3621953467134517E-5 0.0 0.0 2.315732089412868E-4 1.7708539507274872E-4 17 1.3621953467134517E-5 0.0 0.0 2.315732089412868E-4 1.7708539507274872E-4 18 1.3621953467134517E-5 0.0 0.0 2.5881711587555584E-4 1.7708539507274872E-4 19 1.3621953467134517E-5 0.0 0.0 2.7243906934269036E-4 1.9070734853988324E-4 20 1.3621953467134517E-5 0.0 0.0 3.1330492974409387E-4 2.0432930200701776E-4 21 1.3621953467134517E-5 0.0 0.0 3.6779274361263195E-4 2.5881711587555584E-4 22 1.3621953467134517E-5 0.0 0.0 5.176342317511117E-4 2.5881711587555584E-4 23 1.3621953467134517E-5 0.0 0.0 7.219635337581294E-4 3.269268832112284E-4 24 1.3621953467134517E-5 0.0 0.0 0.0010080245565679542 3.269268832112284E-4 25 1.3621953467134517E-5 0.0 0.0 0.0012532197189763755 3.269268832112284E-4 26 1.3621953467134517E-5 0.0 0.0 0.0023021101359457334 3.405488366783629E-4 27 1.3621953467134517E-5 0.0 0.0 0.005394293572985269 3.405488366783629E-4 28 1.3621953467134517E-5 0.0 0.0 0.014371160907826915 3.405488366783629E-4 29 1.3621953467134517E-5 0.0 0.0 0.02856523642058108 3.5417079014549743E-4 30 1.3621953467134517E-5 0.0 0.0 0.049733752108508125 3.5417079014549743E-4 31 1.3621953467134517E-5 0.0 0.0 0.10179685825989625 3.5417079014549743E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TATACAC 2015 0.0 17.995037 3 AAGACGG 2615 0.0 17.686424 5 CAAGACG 2695 0.0 17.16141 4 GGTATCA 10065 0.0 16.174864 1 CGCAATA 1810 0.0 15.024861 36 TTCGGGC 1200 0.0 14.954166 35 CGCTTCG 1185 0.0 14.8312235 32 TCTAGCG 1795 0.0 14.738162 28 CTAGCGG 1805 0.0 14.656509 29 CGCAAGA 3240 0.0 14.560185 2 ATCTCCG 2145 0.0 14.4895115 10 TTATACA 2425 0.0 14.418556 2 ACGGACC 3225 0.0 14.054264 8 TATGCCG 790 0.0 14.050632 33 AGACGGA 3395 0.0 13.949926 6 GCGCAAG 3325 0.0 13.8541355 1 TACACAT 2585 0.0 13.812379 5 TATTCCG 255 1.8189894E-12 13.784313 5 CGAGCCG 2620 0.0 13.627863 15 GCGCAAT 2000 0.0 13.597501 35 >>END_MODULE