##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2727473.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 6340013 Sequences flagged as poor quality 0 Sequence length 43 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.30780599345774 31.0 31.0 34.0 30.0 34.0 2 31.58110148985499 31.0 31.0 34.0 30.0 34.0 3 31.681015953752777 31.0 31.0 34.0 30.0 34.0 4 35.45488723761292 37.0 35.0 37.0 33.0 37.0 5 35.268755600343404 37.0 35.0 37.0 33.0 37.0 6 35.2781921740539 37.0 35.0 37.0 32.0 37.0 7 35.20689168933881 37.0 35.0 37.0 32.0 37.0 8 35.193051023712414 37.0 35.0 37.0 32.0 37.0 9 36.81290038364275 39.0 37.0 39.0 32.0 39.0 10 36.59704420164438 39.0 35.0 39.0 32.0 39.0 11 36.71564995213732 39.0 35.0 39.0 32.0 39.0 12 36.55222016106276 39.0 35.0 39.0 32.0 39.0 13 36.65474471424585 39.0 35.0 39.0 32.0 39.0 14 37.74102135121805 40.0 37.0 41.0 32.0 41.0 15 37.7053383013568 40.0 37.0 41.0 32.0 41.0 16 37.649095672201305 39.0 36.0 41.0 32.0 41.0 17 37.59053080805986 39.0 36.0 41.0 32.0 41.0 18 37.60513472133259 39.0 36.0 41.0 32.0 41.0 19 37.61455094808165 39.0 36.0 41.0 32.0 41.0 20 37.58846204258572 39.0 36.0 41.0 32.0 41.0 21 37.53972838856955 39.0 36.0 41.0 32.0 41.0 22 37.47170723466971 39.0 36.0 41.0 32.0 41.0 23 37.34593130960457 39.0 36.0 41.0 31.0 41.0 24 37.29247873781962 39.0 36.0 41.0 31.0 41.0 25 37.19430843438334 39.0 36.0 41.0 31.0 41.0 26 36.99968832871478 39.0 36.0 41.0 31.0 41.0 27 36.93226575402921 39.0 36.0 40.0 31.0 41.0 28 36.76448849552832 39.0 35.0 40.0 30.0 41.0 29 36.6431644540792 39.0 35.0 40.0 30.0 41.0 30 36.75026407674559 39.0 35.0 40.0 30.0 41.0 31 36.72472201555423 39.0 35.0 40.0 30.0 41.0 32 36.69564242218431 39.0 35.0 40.0 30.0 41.0 33 36.576767113884465 39.0 35.0 40.0 30.0 41.0 34 36.553520473853915 39.0 35.0 40.0 30.0 41.0 35 36.45546610077929 39.0 35.0 40.0 30.0 41.0 36 36.37969133501777 38.0 35.0 40.0 30.0 41.0 37 36.30823548784522 38.0 35.0 40.0 30.0 41.0 38 36.1921335177073 38.0 35.0 40.0 29.0 41.0 39 36.05652890617101 38.0 35.0 40.0 29.0 41.0 40 35.94916950485748 38.0 35.0 40.0 28.0 41.0 41 35.80226365466443 38.0 34.0 40.0 28.0 41.0 42 35.68340948196794 38.0 34.0 40.0 27.0 41.0 43 35.50885495029742 38.0 34.0 40.0 27.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 12 4.0 13 7.0 14 13.0 15 21.0 16 88.0 17 181.0 18 335.0 19 751.0 20 1699.0 21 3340.0 22 6444.0 23 11328.0 24 18742.0 25 29944.0 26 45320.0 27 66442.0 28 92769.0 29 126053.0 30 166794.0 31 211782.0 32 261834.0 33 322476.0 34 400506.0 35 495732.0 36 619758.0 37 806066.0 38 1161442.0 39 1490142.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 42.76988075576501 19.024472031839682 12.39145724149146 25.814189970903843 2 18.763557740339017 22.12265179897896 33.766728869483394 25.347061591198628 3 20.596740101321558 24.394934205970873 29.669639478657224 25.338686214050348 4 14.975679071951431 16.241070799066186 33.636445224954585 35.1468049040278 5 14.290096881504816 37.943502639505624 33.12843364832217 14.63796683066738 6 34.18515072445435 34.2015860219845 16.357632074256 15.255631179305155 7 28.242197610635817 31.96909848607566 21.03796948050422 18.75073442278431 8 28.346850392893515 33.03942752167858 20.285683956799456 18.328038128628442 9 28.323064952705934 13.90964024837173 19.02948779442566 38.73780700449668 10 17.789032924695896 26.707894762991813 31.875155461037696 23.627916851274595 11 36.46599778265439 21.83411926757879 20.416409240801244 21.28347370896558 12 21.41686460264356 25.877880692042744 29.038442034740306 23.66681267057339 13 30.323108170282932 19.551726471223326 25.347850233114666 24.77731512537908 14 22.919243225526508 21.05730698028537 24.83050113619641 31.19294865799171 15 26.51237465916868 27.1023103580387 22.123724351984766 24.261590630807856 16 25.178544586580497 25.55207694369081 25.198639182601045 24.070739287127648 17 24.373356963148183 26.246602333465248 24.635233397786408 24.744807305600162 18 24.709618103306727 24.169035615542114 26.524425107645676 24.596921173505482 19 24.6420157182643 25.725672802248194 26.096381821299104 23.535929658188397 20 24.11066034091728 23.75518788368415 26.506570254666673 25.627581520731894 21 24.913497811439818 25.02958590148001 26.89808364746255 23.158832639617614 22 25.315105820760937 24.301716731495663 25.86512046584132 24.518056981902088 23 24.009603765796694 24.364476855173642 26.81934563856573 24.80657374046394 24 23.488895054316135 25.34479030248045 26.73300512159833 24.433309521605082 25 24.598861232618923 24.352473725211603 25.701004083114654 25.347660959054817 26 24.15083376012005 25.33923826339157 26.538636434972613 23.971291541515765 27 25.660310160247306 24.843908048768984 25.57001066086142 23.92577113012229 28 23.862048863306747 25.449947815564418 25.993117048813623 24.694886272315212 29 23.826260293157127 25.27849706301864 26.88641174710525 24.008830896718983 30 24.290186786683247 25.46081530116736 26.627894927029327 23.621102985120064 31 24.984948769032492 24.951967764103955 25.97597197355904 24.08711149330451 32 24.203656995656004 25.17687266571851 25.73089361173234 24.888576726893145 33 23.624699192257175 24.481006584686813 26.33246966528302 25.56182455777299 34 24.882078317505027 25.05551644767921 26.661286025754205 23.40111920906156 35 24.317189885888247 24.73084834368636 27.177688752373218 23.77427301805217 36 23.68222273361269 25.656146130930647 26.458810100231656 24.202821035225007 37 24.47419271853228 25.319774580903857 26.881711441285688 23.324321259278175 38 24.34630654542822 24.292805077844477 26.556838290394673 24.80405008633263 39 24.322079465767658 24.784854542096365 26.400198233032015 24.492867759103966 40 24.68110081162294 24.32424034461759 27.004424123420566 23.9902347203389 41 23.2081700778847 25.713969356214257 26.800922963407174 24.276937602493874 42 24.803040624680108 25.20193570581007 27.002121289025748 22.99290238048408 43 23.62357932073641 24.009146353485395 26.60978770863719 25.757486617141005 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 1676.0 1 2148.0 2 2620.0 3 4804.5 4 6989.0 5 6989.0 6 8995.5 7 11002.0 8 9406.5 9 7811.0 10 10714.5 11 13618.0 12 13618.0 13 22718.0 14 31818.0 15 42658.0 16 53498.0 17 49386.0 18 45274.0 19 45274.0 20 52995.5 21 60717.0 22 51603.0 23 42489.0 24 49268.0 25 56047.0 26 56047.0 27 65826.5 28 75606.0 29 85838.0 30 96070.0 31 109531.5 32 122993.0 33 122993.0 34 142330.5 35 161668.0 36 187479.5 37 213291.0 38 240249.0 39 267207.0 40 267207.0 41 296994.0 42 326781.0 43 350182.0 44 373583.0 45 423745.5 46 473908.0 47 473908.0 48 548242.0 49 622576.0 50 627220.5 51 631865.0 52 590550.0 53 549235.0 54 549235.0 55 518932.5 56 488630.0 57 459209.5 58 429789.0 59 392345.5 60 354902.0 61 354902.0 62 306680.5 63 258459.0 64 238173.5 65 217888.0 66 186046.5 67 154205.0 68 154205.0 69 118930.5 70 83656.0 71 69814.0 72 55972.0 73 37775.5 74 19579.0 75 19579.0 76 15335.5 77 11092.0 78 9690.5 79 8289.0 80 6198.0 81 4107.0 82 4107.0 83 3306.0 84 2505.0 85 1985.0 86 1465.0 87 1013.5 88 562.0 89 562.0 90 421.0 91 280.0 92 209.5 93 139.0 94 130.5 95 122.0 96 122.0 97 69.0 98 16.0 99 15.0 100 14.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 6340013.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 45.6020077512571 #Duplication Level Percentage of deduplicated Percentage of total 1 81.05224813783978 36.96145247838584 2 9.980325669681752 9.10245777097795 3 3.284357695791725 4.493199153041854 4 1.5805491787964425 2.883048636108736 5 0.9379878896163161 2.138706550643427 6 0.6095091511691467 1.6676904621646536 7 0.4194447149960633 1.338926480113201 8 0.31784481539790493 1.1595489388377713 9 0.2372627635540751 0.9737692544409852 >10 1.3703540343628227 11.401345658325683 >50 0.10822563883960841 3.4308953791567944 >100 0.07885351055415948 7.4335838547178925 >500 0.011881063346199297 3.7788818902736896 >1k 0.01029228899139656 9.501892612754139 >5k 5.871440028568928E-4 1.7258814785747736 >10k+ 2.763030601679496E-4 2.008719401482656 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 27553 0.43458901424965535 No Hit TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 24627 0.38843768932334993 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 20315 0.3204252104845842 No Hit GTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGAAGC 11613 0.1831699714180397 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 11522 0.18173464313085794 No Hit CCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTG 10851 0.17115106861768264 No Hit CTTATACACATCTCCGAGCCCACGAGACAAGAGGCAATCTCGT 10538 0.16621417022331025 No Hit GGGTAGGCACACGCTGAGCCAGTCAGTGTAGCGCGCGTGCAGC 10519 0.16591448629521738 No Hit GTACATGGGGAATAATTGCAATCCCCGATCCCCATCACGAATG 9303 0.1467347148972723 No Hit GTGTAGCGCGCGTGCAGCCCCGGACATCTAAGGGCATCACAGA 9219 0.1454097964783353 No Hit GGATTGACAGATTGATAGCTCTTTCTCGATTCCGTGGGTGGTG 7070 0.11151396692719716 No Hit CCTTAGATGTCCGGGGCTGCACGCGCGCTACACTGACTGGCTC 6878 0.10848558196962688 No Hit GTGCATGGCCGTTCTTAGTTGGTGGAGCGATTTGTCTGGTTAA 6822 0.10760230302366888 No Hit GCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAATGTTTT 6821 0.1075865301853482 No Hit GAGTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGAA 6634 0.10463700941938131 No Hit GCCATGCACCACCACCCACGGAATCGAGAAAGAGCTATCAATC 6559 0.10345404654533041 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 1.5772838320678522E-5 1.5772838320678522E-5 2 0.0 0.0 0.0 4.731851496203557E-5 1.5772838320678522E-5 3 0.0 0.0 0.0 4.731851496203557E-5 1.5772838320678522E-5 4 0.0 0.0 0.0 9.463702992407114E-5 1.5772838320678522E-5 5 0.0 0.0 0.0 1.7350122152746375E-4 1.5772838320678522E-5 6 0.0 0.0 0.0 1.8927405984814227E-4 3.1545676641357044E-5 7 0.0 0.0 0.0 2.050468981688208E-4 3.1545676641357044E-5 8 0.0 0.0 0.0 2.2081973648949932E-4 3.1545676641357044E-5 9 0.0 0.0 0.0 2.996839280928919E-4 3.1545676641357044E-5 10 0.0 0.0 0.0 3.470024430549275E-4 3.1545676641357044E-5 11 0.0 0.0 0.0 3.470024430549275E-4 3.1545676641357044E-5 12 0.0 0.0 0.0 3.62775281375606E-4 3.1545676641357044E-5 13 0.0 0.0 0.0 3.7854811969628455E-4 3.1545676641357044E-5 14 1.5772838320678522E-5 0.0 0.0 4.258666346583201E-4 4.731851496203557E-5 15 1.5772838320678522E-5 0.0 0.0 4.4163947297899865E-4 4.731851496203557E-5 16 1.5772838320678522E-5 0.0 0.0 4.7318514962035565E-4 6.309135328271409E-5 17 1.5772838320678522E-5 0.0 0.0 5.047308262617127E-4 6.309135328271409E-5 18 1.5772838320678522E-5 0.0 0.0 5.205036645823912E-4 7.886419160339261E-5 19 1.5772838320678522E-5 0.0 0.0 6.466863711478194E-4 7.886419160339261E-5 20 1.5772838320678522E-5 0.0 0.0 8.044147543546046E-4 7.886419160339261E-5 21 1.5772838320678522E-5 0.0 0.0 0.001025234490844104 7.886419160339261E-5 22 1.5772838320678522E-5 0.0 0.0 0.00138800977221971 7.886419160339261E-5 23 1.5772838320678522E-5 0.0 0.0 0.0021293331732916004 1.2618270656542817E-4 24 1.5772838320678522E-5 0.0 0.0 0.002933747927646205 1.2618270656542817E-4 25 1.5772838320678522E-5 0.0 0.0 0.0038170268736042023 1.419555448861067E-4 26 1.5772838320678522E-5 0.0 0.0 0.006135634106743945 1.419555448861067E-4 27 1.5772838320678522E-5 0.0 0.0 0.014069371782045242 1.419555448861067E-4 28 1.5772838320678522E-5 0.0 0.0 0.0339273752277795 1.419555448861067E-4 29 1.5772838320678522E-5 0.0 0.0 0.06063079050468824 1.419555448861067E-4 30 1.5772838320678522E-5 0.0 0.0 0.10091461957570119 1.419555448861067E-4 31 1.5772838320678522E-5 0.0 0.0 0.19061475110539994 1.419555448861067E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TATACAC 2480 0.0 17.754032 3 CAAGACG 1655 0.0 16.767372 4 AAGACGG 1680 0.0 16.517857 5 ATCTCCG 2400 0.0 15.879167 10 TACACAT 2775 0.0 15.466666 5 TCTAGCG 1140 0.0 15.254387 28 TTATACA 2690 0.0 15.130112 2 CGCAATA 1140 0.0 14.929826 36 CTAGCGG 1185 0.0 14.8312235 29 ACACATC 2785 0.0 14.813285 6 ACATCTC 2840 0.0 14.786972 8 CCCACGA 2655 0.0 14.354049 19 GCAATCT 2685 0.0 14.262569 34 CGCAAGA 1870 0.0 14.245989 2 ATACACA 3355 0.0 13.950821 4 TACGGAT 3070 0.0 13.859935 27 CACGAGA 2755 0.0 13.833031 21 GGCAATC 2770 0.0 13.824909 33 CCGAGCC 4150 0.0 13.819277 14 GCGCAAG 2035 0.0 13.818182 1 >>END_MODULE