##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2727472.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 3658008 Sequences flagged as poor quality 0 Sequence length 43 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.322109465042175 31.0 31.0 34.0 30.0 34.0 2 31.606882762421513 31.0 31.0 34.0 30.0 34.0 3 31.720462065692583 31.0 31.0 34.0 30.0 34.0 4 35.490051415961915 37.0 35.0 37.0 33.0 37.0 5 35.29092090558577 37.0 35.0 37.0 33.0 37.0 6 35.290333700746416 37.0 35.0 37.0 32.0 37.0 7 35.2089016754474 37.0 35.0 37.0 32.0 37.0 8 35.19756517755019 37.0 35.0 37.0 32.0 37.0 9 36.8311887234801 39.0 37.0 39.0 32.0 39.0 10 36.604989655572105 39.0 35.0 39.0 32.0 39.0 11 36.722752930009996 39.0 35.0 39.0 32.0 39.0 12 36.55439080505018 39.0 35.0 39.0 32.0 39.0 13 36.66330008026226 39.0 35.0 39.0 32.0 39.0 14 37.77447452274571 40.0 37.0 41.0 32.0 41.0 15 37.72466025224658 40.0 37.0 41.0 32.0 41.0 16 37.69308104301576 39.0 37.0 41.0 32.0 41.0 17 37.64361340926537 39.0 36.0 41.0 32.0 41.0 18 37.62083461818563 39.0 36.0 41.0 32.0 41.0 19 37.62663969023578 39.0 37.0 41.0 32.0 41.0 20 37.595991588864756 39.0 36.0 41.0 32.0 41.0 21 37.53092912864051 39.0 36.0 41.0 32.0 41.0 22 37.45460890189415 39.0 36.0 41.0 32.0 41.0 23 37.36026192397611 39.0 36.0 41.0 31.0 41.0 24 37.27992913082749 39.0 36.0 41.0 31.0 41.0 25 37.19506490964481 39.0 36.0 41.0 31.0 41.0 26 36.99482040498545 39.0 36.0 41.0 31.0 41.0 27 36.92257452690098 39.0 36.0 40.0 30.0 41.0 28 36.76583457444598 39.0 36.0 40.0 30.0 41.0 29 36.62567222378956 39.0 35.0 40.0 30.0 41.0 30 36.76133157718627 39.0 35.0 40.0 30.0 41.0 31 36.764788103251824 39.0 35.0 40.0 30.0 41.0 32 36.737921841614344 39.0 35.0 40.0 30.0 41.0 33 36.63684497136146 39.0 35.0 40.0 30.0 41.0 34 36.59651509783467 39.0 35.0 40.0 30.0 41.0 35 36.51247564248082 39.0 35.0 40.0 30.0 41.0 36 36.43229839847261 39.0 35.0 40.0 30.0 41.0 37 36.354390969073876 38.0 35.0 40.0 30.0 41.0 38 36.23772966051468 38.0 35.0 40.0 29.0 41.0 39 36.12332203756799 38.0 35.0 40.0 29.0 41.0 40 35.99955139518558 38.0 35.0 40.0 28.0 41.0 41 35.87387124358394 38.0 34.0 40.0 28.0 41.0 42 35.74862985537484 38.0 34.0 40.0 27.0 41.0 43 35.582560234969414 38.0 34.0 40.0 27.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 13 1.0 14 1.0 15 6.0 16 19.0 17 53.0 18 149.0 19 397.0 20 853.0 21 1841.0 22 3551.0 23 6547.0 24 10930.0 25 17451.0 26 26607.0 27 38330.0 28 53509.0 29 72908.0 30 95129.0 31 121736.0 32 150020.0 33 183554.0 34 227347.0 35 281544.0 36 353195.0 37 461828.0 38 673339.0 39 877163.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 42.07847549813997 19.562067660868976 12.122690819702964 26.236766021288087 2 18.538860494564254 21.93390501059593 33.826333895387876 25.70090059945194 3 20.349682122073 24.04376917710404 29.554035967116526 26.052512733706436 4 14.684549623729637 16.551713391550813 33.93603841216312 34.82769857255643 5 14.537721076607815 36.74149974521652 33.93603841216312 14.784740766012542 6 34.23937290459725 34.83248259708563 15.993978143295475 14.934166355021642 7 28.273584967556115 30.769287546664742 21.455666581374345 19.5014609044048 8 27.623449702679707 33.14560821080763 20.165565520906462 19.065376565606197 9 26.664922548009734 14.124682067398432 19.489323150742152 39.72107223384968 10 17.39804833669035 26.725611316322983 32.52398573212524 23.352354614861422 11 36.27523504595944 21.76493326422468 20.99626354015628 20.963568149659594 12 21.22485790080284 25.89010193526094 29.328995453263083 23.55604471067313 13 30.32776308854437 19.608650391141847 25.1427006173852 24.92088590292859 14 22.62277720551732 20.987734307852797 24.66156443616307 31.72792405046681 15 25.651884850989937 27.344172019306683 21.985381114530096 25.018562015173284 16 25.452705406877186 25.574602351881133 24.634063129440943 24.33862911180074 17 24.074796993336264 26.659482428687966 24.961673129200374 24.3040474487754 18 24.89158033552688 24.181767781809114 26.319816687114955 24.606835195549053 19 24.25464897835106 25.873043470653972 25.855356248537454 24.016951302457514 20 24.289531351489664 24.432778714535342 26.088734633713212 25.188955300261785 21 25.084062145298752 25.05330770189677 25.911370341453598 23.951259811350877 22 24.92211608066467 25.3022683383962 25.692316692582413 24.083298888356726 23 24.01941165792967 24.68400834552576 26.084305993863328 25.21227400268124 24 24.158613103087802 25.988516154147284 25.852485833819937 24.000384908944977 25 24.49456097416955 25.084636228242257 25.319244791154095 25.101558006434104 26 24.686714736545138 25.597100935809873 25.91027685013264 23.80590747751235 27 25.169737190295923 25.076052321372728 25.36194562723756 24.3922648610938 28 24.079526343299413 24.982968872676057 26.480477899446914 24.45702688457762 29 24.28277904258274 25.078211966731622 26.37432722946478 24.26468176122086 30 23.47652055435636 25.80152913826323 26.58036833161655 24.14158197576386 31 24.635402656309115 25.120776116399963 25.761589367765186 24.48223185952573 32 23.835623104159424 25.55573962659458 25.674328760352626 24.934308508893366 33 23.55410376357843 25.100819899792455 26.135043991155843 25.210032345473277 34 24.886030867073007 25.186905004034983 25.997346096564034 23.929718032327976 35 24.29144496130134 25.12763777443898 26.798164465468638 23.782752798791034 36 23.692184380132574 25.617685909926934 26.218477378945042 24.47165233099545 37 24.471488307297303 25.4906768929975 26.17954908791889 23.858285711786305 38 23.696558345416413 24.802214757321472 26.750925640403196 24.750301256858926 39 24.535156839460164 24.533516602478723 25.896717557752748 25.034609000308368 40 24.044561958311736 24.85090245838719 27.109426769979727 23.995108813321348 41 23.469850257298507 25.327063254098952 26.719733800472827 24.483352688129713 42 24.704347284095608 25.117140257757775 26.801526951280586 23.37698550686603 43 23.857656954276756 23.99628431649138 26.909755254772545 25.23630347445932 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 349.0 1 403.0 2 457.0 3 1146.5 4 1836.0 5 1836.0 6 2598.0 7 3360.0 8 3033.0 9 2706.0 10 3641.5 11 4577.0 12 4577.0 13 8126.5 14 11676.0 15 17510.0 16 23344.0 17 21919.5 18 20495.0 19 20495.0 20 24247.5 21 28000.0 22 26175.5 23 24351.0 24 29797.5 25 35244.0 26 35244.0 27 42424.5 28 49605.0 29 56473.0 30 63341.0 31 72815.5 32 82290.0 33 82290.0 34 95026.5 35 107763.0 36 124109.5 37 140456.0 38 156940.5 39 173425.0 40 173425.0 41 188442.0 42 203459.0 43 215515.5 44 227572.0 45 249073.5 46 270575.0 47 270575.0 48 304048.5 49 337522.0 50 334611.0 51 331700.0 52 317460.5 53 303221.0 54 303221.0 55 286057.0 56 268893.0 57 259527.0 58 250161.0 59 232142.0 60 214123.0 61 214123.0 62 185167.0 63 156211.0 64 140986.0 65 125761.0 66 106539.5 67 87318.0 68 87318.0 69 68315.0 70 49312.0 71 40537.5 72 31763.0 73 22039.5 74 12316.0 75 12316.0 76 9401.5 77 6487.0 78 5443.5 79 4400.0 80 3276.0 81 2152.0 82 2152.0 83 1549.0 84 946.0 85 723.5 86 501.0 87 363.0 88 225.0 89 225.0 90 143.5 91 62.0 92 43.0 93 24.0 94 23.5 95 23.0 96 23.0 97 13.0 98 3.0 99 3.0 100 3.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 3658008.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 56.62285322407388 #Duplication Level Percentage of deduplicated Percentage of total 1 84.43377867136783 47.808814568628 2 9.024448981776157 10.219801002465084 3 2.673689778163615 4.54175831626995 4 1.2003722205668845 2.718740002376573 5 0.6621931266099587 1.8747632107013128 6 0.4221397861913474 1.4341655492132754 7 0.28112867230257416 1.1142815284207193 8 0.20115730968192597 0.9112080656855416 9 0.1488206401117567 0.7583984335584647 >10 0.8187989195535603 8.425559478812765 >50 0.06586660806729178 2.5972748900126534 >100 0.0519756434122526 6.223376800143194 >500 0.008944964462018954 3.615735311261016 >1k 0.006396130492614737 6.355870240717511 >5k 1.44273620134167E-4 0.557111119343468 >10k+ 1.44273620134167E-4 0.8431414823907231 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CTTATACACATCTCCGAGCCCACGAGACGCTACGCTATCTCGT 10590 0.2895018272239973 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 10217 0.27930502065605106 No Hit TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 10156 0.277637446391588 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 7561 0.20669719694434785 No Hit CCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTG 6602 0.1804807425243466 No Hit GTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGAAGC 6296 0.17211553391900727 No Hit GGGTAGGCACACGCTGAGCCAGTCAGTGTAGCGCGCGTGCAGC 4676 0.12782913542015217 No Hit GTGTAGCGCGCGTGCAGCCCCGGACATCTAAGGGCATCACAGA 4085 0.11167280115297726 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 4044 0.11055197254899389 No Hit GCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAATGTTTT 3870 0.10579528530282056 No Hit GTACATGGGGAATAATTGCAATCCCCGATCCCCATCACGAATG 3803 0.10396368734021358 No Hit GAGTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGAA 3782 0.10338960439670991 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 1.0934913209593856E-4 2 0.0 5.467456604796928E-5 0.0 0.0 1.0934913209593856E-4 3 0.0 5.467456604796928E-5 0.0 0.0 1.0934913209593856E-4 4 0.0 8.201184907195391E-5 0.0 0.0 1.0934913209593856E-4 5 0.0 8.201184907195391E-5 0.0 2.733728302398464E-5 1.0934913209593856E-4 6 0.0 8.201184907195391E-5 0.0 2.733728302398464E-5 1.366864151199232E-4 7 0.0 8.201184907195391E-5 0.0 2.733728302398464E-5 1.366864151199232E-4 8 0.0 1.0934913209593856E-4 0.0 2.733728302398464E-5 1.366864151199232E-4 9 0.0 2.733728302398464E-4 0.0 2.733728302398464E-5 1.6402369814390782E-4 10 0.0 3.00710113263831E-4 0.0 2.733728302398464E-5 1.6402369814390782E-4 11 0.0 3.00710113263831E-4 0.0 5.467456604796928E-5 1.6402369814390782E-4 12 0.0 3.00710113263831E-4 0.0 5.467456604796928E-5 1.6402369814390782E-4 13 0.0 3.00710113263831E-4 0.0 5.467456604796928E-5 1.6402369814390782E-4 14 0.0 3.00710113263831E-4 0.0 8.201184907195391E-5 1.9136098116789247E-4 15 0.0 3.00710113263831E-4 0.0 8.201184907195391E-5 2.1869826419187711E-4 16 0.0 3.00710113263831E-4 0.0 1.6402369814390782E-4 2.4603554721586173E-4 17 0.0 3.00710113263831E-4 0.0 3.00710113263831E-4 2.4603554721586173E-4 18 0.0 3.2804739628781564E-4 0.0 3.553846793118003E-4 2.733728302398464E-4 19 0.0 3.553846793118003E-4 0.0 4.920710944317235E-4 3.00710113263831E-4 20 0.0 3.553846793118003E-4 0.0 5.467456604796928E-4 3.00710113263831E-4 21 0.0 3.553846793118003E-4 0.0 6.83432075599616E-4 3.00710113263831E-4 22 0.0 3.553846793118003E-4 0.0 9.568049058394624E-4 3.553846793118003E-4 23 0.0 3.553846793118003E-4 0.0 0.0013942014342232165 3.553846793118003E-4 24 0.0 3.8272196233578494E-4 0.0 0.0021596453588947863 3.553846793118003E-4 25 0.0 3.8272196233578494E-4 0.0 0.002870414717518387 4.1005924535976956E-4 26 0.0 3.8272196233578494E-4 0.0 0.005576805736892866 4.1005924535976956E-4 27 0.0 3.8272196233578494E-4 0.0 0.01320390770058458 4.1005924535976956E-4 28 0.0 3.8272196233578494E-4 0.0 0.031082490798270534 4.1005924535976956E-4 29 0.0 3.8272196233578494E-4 0.0 0.05544000997264085 4.3739652838375423E-4 30 0.0 3.8272196233578494E-4 0.0 0.09045906952636516 4.3739652838375423E-4 31 0.0 3.8272196233578494E-4 0.0 0.16101659701126952 4.3739652838375423E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TATACAC 2365 0.0 23.46723 3 CTTATAC 2445 0.0 22.018406 1 TTATACA 2550 0.0 21.619608 2 TACACAT 2830 0.0 19.676678 5 ATCTCCG 2835 0.0 19.054674 10 CGCTATC 2700 0.0 18.842594 33 CTACGCT 2780 0.0 18.69964 30 CGCTACG 2675 0.0 18.672897 28 GCTACGC 2765 0.0 18.600363 29 TATCTCG 2670 0.0 18.569288 36 GACGCTA 2755 0.0 18.264973 26 ACGCTAC 2790 0.0 18.035841 27 TCTCCGA 2985 0.0 18.035175 11 CGAGACG 2855 0.0 18.01401 23 ATACACA 3205 0.0 17.95164 4 ACACATC 3100 0.0 17.903225 6 ACATCTC 3175 0.0 17.888187 8 GCCCACG 3050 0.0 17.772131 18 CACGAGA 3020 0.0 17.764902 21 CCCACGA 3050 0.0 17.65082 19 >>END_MODULE