##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2727471.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 5886054 Sequences flagged as poor quality 0 Sequence length 43 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.288672852814464 31.0 31.0 34.0 30.0 34.0 2 31.566920045245933 31.0 31.0 34.0 30.0 34.0 3 31.67739541635194 31.0 31.0 34.0 30.0 34.0 4 35.45338761757877 37.0 35.0 37.0 33.0 37.0 5 35.25682961794099 37.0 35.0 37.0 33.0 37.0 6 35.262278939336944 37.0 35.0 37.0 32.0 37.0 7 35.17431780272488 37.0 35.0 37.0 32.0 37.0 8 35.16612470765644 37.0 35.0 37.0 32.0 37.0 9 36.79172277386514 39.0 37.0 39.0 32.0 39.0 10 36.56622382329486 39.0 35.0 39.0 32.0 39.0 11 36.68308037948683 39.0 35.0 39.0 32.0 39.0 12 36.51281826500402 39.0 35.0 39.0 32.0 39.0 13 36.61800180562394 39.0 35.0 39.0 32.0 39.0 14 37.716573446319046 40.0 37.0 41.0 32.0 41.0 15 37.66479274570026 39.0 36.0 41.0 32.0 41.0 16 37.618959323173044 39.0 36.0 41.0 32.0 41.0 17 37.5780315641005 39.0 36.0 41.0 32.0 41.0 18 37.55586238250618 39.0 36.0 41.0 32.0 41.0 19 37.54733272919345 39.0 36.0 41.0 32.0 41.0 20 37.52948681748418 39.0 36.0 41.0 32.0 41.0 21 37.462697589930364 39.0 36.0 41.0 32.0 41.0 22 37.384259981304965 39.0 36.0 41.0 31.0 41.0 23 37.295587672148436 39.0 36.0 41.0 31.0 41.0 24 37.20561483126047 39.0 36.0 41.0 31.0 41.0 25 37.11527094382756 39.0 36.0 41.0 31.0 41.0 26 36.914172550914415 39.0 36.0 40.0 30.0 41.0 27 36.820715712088266 39.0 36.0 40.0 30.0 41.0 28 36.659348011418174 39.0 35.0 40.0 30.0 41.0 29 36.5264701954824 39.0 35.0 40.0 30.0 41.0 30 36.64752005333285 39.0 35.0 40.0 30.0 41.0 31 36.65693230133465 39.0 35.0 40.0 30.0 41.0 32 36.615311888066266 39.0 35.0 40.0 30.0 41.0 33 36.50209631104302 39.0 35.0 40.0 30.0 41.0 34 36.46590992879101 39.0 35.0 40.0 30.0 41.0 35 36.36930751909514 38.0 35.0 40.0 30.0 41.0 36 36.293666860684596 38.0 35.0 40.0 30.0 41.0 37 36.20062524061111 38.0 35.0 40.0 29.0 41.0 38 36.081674921772716 38.0 35.0 40.0 29.0 41.0 39 35.96227608513276 38.0 35.0 40.0 28.0 41.0 40 35.834306311155146 38.0 34.0 40.0 28.0 41.0 41 35.69042808645656 38.0 34.0 40.0 27.0 41.0 42 35.56517388389573 38.0 34.0 40.0 27.0 41.0 43 35.39160089255043 38.0 34.0 40.0 26.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 11 1.0 12 2.0 13 6.0 14 9.0 15 13.0 16 47.0 17 143.0 18 311.0 19 757.0 20 1689.0 21 3539.0 22 6521.0 23 11443.0 24 19253.0 25 30117.0 26 45169.0 27 64662.0 28 90861.0 29 121714.0 30 158167.0 31 199721.0 32 247416.0 33 303049.0 34 372300.0 35 458908.0 36 575032.0 37 748700.0 38 1082523.0 39 1343981.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 42.69806223320411 19.07287972553429 12.14910702484211 26.07995101641949 2 19.017052850687406 21.91172558049926 32.72523493668254 26.345986632130796 3 20.739802930792003 23.77241187389718 29.220068317416047 26.267716877894763 4 15.062688857424686 16.143310951615465 33.070338804231156 35.7236613867287 5 14.76914754774591 36.69414177987494 33.335287104059866 15.201423568319287 6 35.03095622296364 33.9255297352012 15.73109930693806 15.312414734897098 7 28.812053032473028 30.740254846455706 20.905533656334107 19.542158464737156 8 28.553628627939876 32.13310649205733 20.001617382375354 19.311647497627444 9 27.155170509818632 13.88747028144832 19.047174898497364 39.910184310235685 10 18.053555064224692 26.19534241445967 31.68080007420931 24.07030244710633 11 36.721919302813056 21.404560678512293 20.332823993799582 21.540696024875068 12 21.745485175637192 25.72106881792114 28.537471793496966 23.9959742129447 13 30.665875644362078 18.95137217565452 24.880862458958074 25.50188972102532 14 23.169818013902013 20.739378198025367 24.062623278685518 32.028180509387106 15 26.41416473583151 26.72636030862102 21.615465981114003 25.24400897443347 16 25.972799434052085 24.934990402738404 24.384910502010346 24.707299661199166 17 24.822317294404705 26.182107741451233 24.36019105499202 24.63538390915204 18 25.607631190607492 23.23373180062568 25.92030246409564 25.238334544671183 19 24.73293653099343 25.48811139007559 25.336413835143208 24.442538243787773 20 24.76574288988854 23.730601180349346 25.61882714633607 25.884828783426045 21 25.531264239166003 24.600351950559745 25.56682286638893 24.301560943885324 22 25.632350637625816 24.631544324941636 25.068373480773364 24.66773155665918 23 24.432939283261756 24.016310417811322 25.723362374860987 25.82738792406594 24 24.33018793235672 25.672224549757782 25.426083416835795 24.5715041010497 25 25.224539224410787 24.341383888085293 24.698482208963764 25.735594678540156 26 25.109147826370602 25.1682706274866 25.36791201711707 24.354669529025728 27 26.052411343830688 24.414420934636347 24.78611307337649 24.74705464815647 28 24.625428173102048 24.487950671196696 26.029135988218933 24.857485167482324 29 24.398586897096088 24.40876349418473 26.02047143977952 25.17217816893967 30 23.96410226613619 25.661963006115812 26.39802489069927 23.975909837048725 31 25.55749573483356 24.69197530297887 24.68460194215004 25.06592702003753 32 24.52865705955127 24.86258196068198 25.103966086617625 25.50479489314913 33 24.26547564803177 24.48429796940361 25.66046794677725 25.589758435787367 34 25.102776834871037 24.972723661726516 25.464037536862556 24.460461966539892 35 24.94766442849488 24.641534039612957 26.58856000981303 23.82224152207914 36 24.503529869076974 25.2341381849368 25.323637873522735 24.938694072463488 37 25.165399433984128 24.890971098804055 25.709448129425926 24.23418133778589 38 24.267361461515645 24.24840139081293 26.09233622389465 25.391900923776777 39 25.253590945648817 23.90819044473598 25.246897157246607 25.591321452368597 40 24.638323059897175 24.301917719409303 26.557877314751106 24.50188190594242 41 23.80863308423606 25.001282692955247 26.139192742710144 25.050891480098553 42 25.452484805610005 24.69270584333749 26.38582656564143 23.468982785411075 43 24.501559109039775 23.259419638351943 26.25008197342396 25.988939279184326 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 658.0 1 816.0 2 974.0 3 2214.0 4 3454.0 5 3454.0 6 4822.5 7 6191.0 8 5572.0 9 4953.0 10 6602.0 11 8251.0 12 8251.0 13 14274.5 14 20298.0 15 29777.0 16 39256.0 17 35736.5 18 32217.0 19 32217.0 20 37541.0 21 42865.0 22 37077.0 23 31289.0 24 37034.5 25 42780.0 26 42780.0 27 51254.0 28 59728.0 29 68388.5 30 77049.0 31 88122.5 32 99196.0 33 99196.0 34 116886.0 35 134576.0 36 160019.0 37 185462.0 38 212593.5 39 239725.0 40 239725.0 41 269164.0 42 298603.0 43 320665.0 44 342727.0 45 388266.5 46 433806.0 47 433806.0 48 509972.5 49 586139.0 50 581293.0 51 576447.0 52 544124.0 53 511801.0 54 511801.0 55 484566.5 56 457332.0 57 440851.5 58 424371.0 59 397130.0 60 369889.0 61 369889.0 62 321139.0 63 272389.0 64 251610.0 65 230831.0 66 195476.5 67 160122.0 68 160122.0 69 124149.5 70 88177.0 71 72667.5 72 57158.0 73 38885.5 74 20613.0 75 20613.0 76 15877.5 77 11142.0 78 9547.0 79 7952.0 80 5862.5 81 3773.0 82 3773.0 83 2959.5 84 2146.0 85 1588.5 86 1031.0 87 718.0 88 405.0 89 405.0 90 278.5 91 152.0 92 108.0 93 64.0 94 56.0 95 48.0 96 48.0 97 28.5 98 9.0 99 7.0 100 5.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 5886054.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 43.18895688082422 #Duplication Level Percentage of deduplicated Percentage of total 1 79.09603238980112 34.16075132327398 2 10.869278102008284 9.388655665466455 3 3.577885823468712 4.635754696629075 4 1.7498021257446785 3.02288514235046 5 1.0280828054743936 2.2200911977775193 6 0.7050325556739679 1.8269772387948184 7 0.49074197077270054 1.4836243670719003 8 0.3506394706172723 1.2115002381763527 9 0.2921528692560545 1.1355999905617935 >10 1.625384838130882 12.885374726998544 >50 0.11412533476555453 3.368103006183873 >100 0.07554456154110266 6.5787394609066645 >500 0.012491456185799124 3.786476479979594 >1k 0.011745102059375186 10.34789099370101 >5k 8.249068336000485E-4 2.3425173131309016 >10k+ 2.3568766674287095E-4 1.6050581589970994 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 18552 0.315185691466643 No Hit TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 17971 0.30531490196997857 No Hit CCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTG 15470 0.26282463599552436 No Hit GTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGAAGC 15404 0.2617033414916003 No Hit CTTATACACATCTCCGAGCCCACGAGACCAGAGAGGATCTCGT 13737 0.23338216061218603 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 13475 0.22893096121782097 No Hit GGGTAGGCACACGCTGAGCCAGTCAGTGTAGCGCGCGTGCAGC 9809 0.16664814831804126 No Hit GAGTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGAA 9306 0.15810252505328695 No Hit GTGTAGCGCGCGTGCAGCCCCGGACATCTAAGGGCATCACAGA 8486 0.1441712903075643 No Hit GTACATGGGGAATAATTGCAATCCCCGATCCCCATCACGAATG 8022 0.1362882501587651 No Hit CATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCG 7947 0.13501405185885146 No Hit GCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAATGTTTT 7455 0.12665531101141783 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 7304 0.12408992510092501 No Hit GGATTGACAGATTGATAGCTCTTTCTCGATTCCGTGGGTGGTG 6416 0.10900341722994726 No Hit CCTTAGATGTCCGGGGCTGCACGCGCGCTACACTGACTGGCTC 6339 0.10769524030870258 No Hit GTGCATGGCCGTTCTTAGTTGGTGGAGCGATTTGTCTGGTTAA 6275 0.10660792442610958 No Hit GCCATGCACCACCACCCACGGAATCGAGAAAGAGCTATCAATC 6086 0.10339694471032715 No Hit GTACATGGAAGCAGTGGTATCAACGCAGAGTACATGGAAGCAG 6034 0.10251350055572035 No Hit AGTCAGTGTAGCGCGCGTGCAGCCCCGGACATCTAAGGGCATC 5961 0.10127328087713773 No Hit TCCATGTACTCTGCGTTGATACCACTGCTTCCATGTACTCTGC 5888 0.1000330611985551 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 3.397862133103094E-5 6.795724266206189E-5 2 0.0 0.0 0.0 3.397862133103094E-5 6.795724266206189E-5 3 0.0 0.0 0.0 5.0967931996546414E-5 6.795724266206189E-5 4 0.0 0.0 0.0 5.0967931996546414E-5 6.795724266206189E-5 5 0.0 0.0 0.0 1.0193586399309283E-4 6.795724266206189E-5 6 0.0 0.0 0.0 1.0193586399309283E-4 6.795724266206189E-5 7 0.0 0.0 0.0 1.189251746586083E-4 6.795724266206189E-5 8 0.0 0.0 0.0 1.189251746586083E-4 6.795724266206189E-5 9 0.0 0.0 0.0 1.5290379598963924E-4 1.3591448532412377E-4 10 0.0 0.0 0.0 1.5290379598963924E-4 1.3591448532412377E-4 11 0.0 0.0 0.0 1.6989310665515471E-4 1.3591448532412377E-4 12 0.0 0.0 0.0 1.8688241732067019E-4 1.8688241732067019E-4 13 0.0 0.0 0.0 2.0387172798618566E-4 2.0387172798618566E-4 14 0.0 0.0 0.0 2.378503493172166E-4 2.378503493172166E-4 15 0.0 1.698931066551547E-5 0.0 2.5483965998273207E-4 2.88818281313763E-4 16 0.0 1.698931066551547E-5 0.0 3.9075414530685584E-4 3.3978621331030943E-4 17 0.0 1.698931066551547E-5 0.0 4.926900092999487E-4 3.3978621331030943E-4 18 0.0 1.698931066551547E-5 0.0 5.266686306309796E-4 4.5871138796891773E-4 19 0.0 1.698931066551547E-5 0.0 6.11615183958557E-4 4.5871138796891773E-4 20 0.0 1.698931066551547E-5 0.0 8.66454843941289E-4 5.606472519620106E-4 21 0.0 1.698931066551547E-5 0.0 0.0012402196785826294 5.606472519620106E-4 22 0.0 1.698931066551547E-5 0.0 0.001512048649230877 6.11615183958557E-4 23 0.0 1.698931066551547E-5 0.0 0.0019028027945377328 6.795724266206189E-4 24 0.0 1.698931066551547E-5 0.0 0.0028202255704755682 6.965617372861343E-4 25 0.0 1.698931066551547E-5 0.0 0.003652701793085826 6.965617372861343E-4 26 0.0 1.698931066551547E-5 0.0 0.005674429762282167 7.135510479516498E-4 27 0.0 1.698931066551547E-5 0.0 0.012775961620467634 7.475296692826807E-4 28 0.0 1.698931066551547E-5 0.0 0.029153657102024548 7.475296692826807E-4 29 0.0 1.698931066551547E-5 0.0 0.0509509426858809 7.475296692826807E-4 30 0.0 1.698931066551547E-5 0.0 0.08304375053303963 7.475296692826807E-4 31 0.0 1.698931066551547E-5 0.0 0.1475011951980053 7.645189799481962E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TATACAC 2465 0.0 23.490871 3 TTATACA 2875 0.0 19.947826 2 TACACAT 3000 0.0 19.301666 5 CTTATAC 2955 0.0 19.032148 1 ATACACA 3245 0.0 18.072418 4 ACACATC 3390 0.0 17.29941 6 ATCTCCG 3380 0.0 17.131657 10 AAGACGG 1975 0.0 16.76709 5 GCCGTCT 930 0.0 16.311827 36 ACATCTC 3655 0.0 16.298222 8 CAAGACG 2145 0.0 15.783217 4 CGCTTCG 935 0.0 15.631017 32 CTAGCGG 1185 0.0 15.299579 29 CACGAGA 3635 0.0 15.268227 21 CGCAAGA 2185 0.0 15.240274 2 TCTAGCG 1190 0.0 15.079832 28 CACATCT 3915 0.0 15.026819 7 CGAGACC 3790 0.0 14.936675 23 TCTCCGA 3885 0.0 14.857142 11 CCCACGA 3845 0.0 14.7711315 19 >>END_MODULE