##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2727470.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1360075 Sequences flagged as poor quality 0 Sequence length 43 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.055213131628772 31.0 31.0 33.0 30.0 34.0 2 31.306827932283145 31.0 31.0 34.0 28.0 34.0 3 31.371250850136942 31.0 31.0 34.0 28.0 34.0 4 35.195337021855416 35.0 35.0 37.0 33.0 37.0 5 35.01546605885705 35.0 35.0 37.0 32.0 37.0 6 35.07915519364741 37.0 35.0 37.0 32.0 37.0 7 34.94864253809533 36.0 35.0 37.0 32.0 37.0 8 35.00580997371468 37.0 35.0 37.0 32.0 37.0 9 36.531548627833025 39.0 35.0 39.0 32.0 39.0 10 36.30670514493686 38.0 35.0 39.0 32.0 39.0 11 36.44108670477731 38.0 35.0 39.0 32.0 39.0 12 36.26739407753249 38.0 35.0 39.0 32.0 39.0 13 36.391892358877264 38.0 35.0 39.0 32.0 39.0 14 37.298159292686066 39.0 36.0 41.0 32.0 41.0 15 37.26001066117677 39.0 36.0 41.0 31.0 41.0 16 37.10986379427605 39.0 36.0 41.0 31.0 41.0 17 37.22161719022848 39.0 36.0 41.0 31.0 41.0 18 37.26156719298568 39.0 36.0 41.0 31.0 41.0 19 37.30015403562304 39.0 36.0 41.0 31.0 41.0 20 37.35256658640149 39.0 36.0 41.0 31.0 41.0 21 37.304829513078325 39.0 36.0 41.0 31.0 41.0 22 37.22126059224675 39.0 36.0 41.0 31.0 41.0 23 37.137254195540685 39.0 36.0 41.0 31.0 41.0 24 37.02586254434498 39.0 36.0 40.0 31.0 41.0 25 36.905948569012736 39.0 35.0 40.0 31.0 41.0 26 36.6394926750363 39.0 35.0 40.0 30.0 41.0 27 36.46978585739757 38.0 35.0 40.0 30.0 41.0 28 36.34158189805709 38.0 35.0 40.0 30.0 41.0 29 36.145341984817016 38.0 35.0 40.0 30.0 41.0 30 36.08113596676654 38.0 35.0 40.0 30.0 41.0 31 36.00038674337812 38.0 35.0 40.0 30.0 41.0 32 35.785280958770656 38.0 34.0 40.0 29.0 41.0 33 35.62733305148613 38.0 34.0 40.0 29.0 41.0 34 35.53862691395695 38.0 34.0 40.0 28.0 41.0 35 35.38055695457971 38.0 34.0 40.0 27.0 41.0 36 35.23383857507858 38.0 34.0 40.0 26.0 41.0 37 35.03213719831627 38.0 33.0 40.0 25.0 41.0 38 34.84236972225796 38.0 33.0 40.0 25.0 41.0 39 34.57984743488411 37.0 33.0 40.0 24.0 41.0 40 34.29807620903259 37.0 33.0 40.0 23.0 41.0 41 34.05751521055824 37.0 33.0 40.0 22.0 41.0 42 33.75071154164292 37.0 33.0 40.0 21.0 41.0 43 33.35417090969248 37.0 32.0 40.0 18.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 11 1.0 12 1.0 13 1.0 14 1.0 15 9.0 16 16.0 17 55.0 18 126.0 19 278.0 20 677.0 21 1286.0 22 2313.0 23 3873.0 24 6393.0 25 9959.0 26 14568.0 27 20554.0 28 27785.0 29 36031.0 30 44836.0 31 54510.0 32 66100.0 33 79350.0 34 95905.0 35 115000.0 36 142272.0 37 185740.0 38 227149.0 39 225286.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 42.42957189860853 20.033748138889397 13.53182728893627 24.004852673565797 2 17.351984265573588 25.11846773155892 32.390419645975406 25.139128356892083 3 21.311471793834897 26.43890961895484 32.12043453486021 20.129184052350055 4 14.765141628219034 19.050272962888076 29.745418451188353 36.439166957704536 5 12.69687333419113 39.18651544951565 33.11346800727901 15.003143209014208 6 31.65060750326269 33.45881660937816 16.1237431759278 18.766832711431356 7 23.769865632409978 33.566751833538596 20.840541881881514 21.822840652169916 8 29.954303990588755 31.43039905887543 20.941639247835596 17.67365770270022 9 26.27458044593129 12.667242615296951 20.068819734205835 40.98935720456593 10 19.282318989761592 29.50763744646435 29.090895722662353 22.1191478411117 11 32.22726687866478 22.541698068121242 20.389904968476003 24.841130084737976 12 20.144550851975072 29.83306067680091 26.986379427605094 23.036009043618918 13 31.461426759553703 18.242596915611273 27.159605168832602 23.13637115600243 14 22.749627777879898 22.808006911383565 26.126868003602745 28.315497307133796 15 27.43267834494421 25.153098174733014 23.58164071834274 23.832582761980035 16 24.6290829549841 24.073892983842804 28.00360274249582 23.29342131867728 17 21.915482602062387 29.766667279377973 26.55280039703693 21.76504972152271 18 23.896255721191846 21.189419701119423 29.95974486701101 24.95457971067772 19 21.388452842674116 26.187526423175196 30.685293090454568 21.73872764369612 20 21.295810892781645 22.445747477161184 31.63038803007187 24.628053599985293 21 22.52633126849622 24.1183758248626 30.628531514806166 22.72676139183501 22 22.262669338087974 26.88131169236991 29.899601124937963 20.956417844604157 23 20.76936933624984 23.546495597669246 30.38347149973347 25.300663566347442 24 21.921658732055217 26.75543628108744 30.97152730547948 20.351377681377866 25 21.083543186956604 26.2027461720861 28.99575391062993 23.717956730327373 26 22.672499678326563 24.828410197967024 30.4884657096116 22.010624414094814 27 21.584618495303566 26.605076925904818 30.394059151149754 21.416245427641858 28 19.844640920537472 24.699961399187544 31.511644578423986 23.943753101851 29 20.31277686892267 24.227193353307722 32.01338161498447 23.44664816278514 30 19.08806499641564 26.63529584765546 34.19818759994853 20.07845155598037 31 21.64027719059611 25.020679006672424 29.10192452622098 24.237119276510484 32 19.270187305847102 26.76050953072441 32.476003161590356 21.493300001838133 33 19.454735952061466 25.526754039299306 30.990276271529144 24.028233737110085 34 20.01896954212084 26.921530062680365 31.732367700310643 21.32713269488815 35 19.159605168832602 28.476003161590352 32.93899233498153 19.425399334595518 36 20.48585555943606 26.79447824568498 28.69959377240226 24.0200724224767 37 20.19822436262706 28.51460397404555 30.584636876642833 20.702534786684556 38 20.417035825230226 25.905630204216678 31.54576034409867 22.131573626454422 39 21.569986949249124 25.17434700292263 29.096189548370493 24.15947649945775 40 20.117934672720256 25.92651140562101 33.13890778082091 20.816646140837822 41 19.976104258956305 26.965057074058418 28.991710015991767 24.06712865099351 42 22.391632814366854 26.79212543425914 30.921162435895077 19.895079315478924 43 20.96590261566458 24.634303255335183 31.1791629138099 23.220631215190338 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 178.0 1 321.5 2 465.0 3 1590.5 4 2716.0 5 2716.0 6 4369.5 7 6023.0 8 5659.5 9 5296.0 10 6791.0 11 8286.0 12 8286.0 13 15751.5 14 23217.0 15 37120.0 16 51023.0 17 42406.5 18 33790.0 19 33790.0 20 37185.0 21 40580.0 22 27581.5 23 14583.0 24 15247.5 25 15912.0 26 15912.0 27 17474.0 28 19036.0 29 20230.5 30 21425.0 31 22527.0 32 23629.0 33 23629.0 34 25992.0 35 28355.0 36 32456.5 37 36558.0 38 41556.5 39 46555.0 40 46555.0 41 51329.0 42 56103.0 43 60747.0 44 65391.0 45 77511.5 46 89632.0 47 89632.0 48 121181.0 49 152730.0 50 162652.5 51 172575.0 52 130555.0 53 88535.0 54 88535.0 55 89627.5 56 90720.0 57 83594.0 58 76468.0 59 66309.0 60 56150.0 61 56150.0 62 48558.0 63 40966.0 64 38706.5 65 36447.0 66 31170.5 67 25894.0 68 25894.0 69 19911.5 70 13929.0 71 11637.0 72 9345.0 73 6219.5 74 3094.0 75 3094.0 76 2381.0 77 1668.0 78 1511.0 79 1354.0 80 1022.5 81 691.0 82 691.0 83 544.0 84 397.0 85 307.5 86 218.0 87 153.0 88 88.0 89 88.0 90 58.0 91 28.0 92 21.5 93 15.0 94 12.0 95 9.0 96 9.0 97 4.5 98 0.0 99 0.5 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 1360075.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 39.165632038114225 #Duplication Level Percentage of deduplicated Percentage of total 1 83.96793112266043 32.886570933518385 2 8.871556747787954 6.949202543782248 3 2.5322364108593214 2.975299185036937 4 1.1550836489352245 1.8095832466975725 5 0.647822773824148 1.268619419275354 6 0.42675137190239243 1.0028392322213726 7 0.3023828577076368 0.8290111017727528 8 0.22888632597008488 0.7171582097200172 9 0.18460503259562921 0.6507155501122046 >10 1.3127695239342925 10.383246646086405 >50 0.1814034752963632 4.947744287549231 >100 0.15777208599592055 12.436337953066438 >500 0.017761168821377862 4.780736325997297 >1k 0.010770070455516364 7.265458205841346 >5k 0.0015115888358619458 4.4241162777792695 >10k+ 7.557944179309729E-4 6.673360881543269 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CTTATACACATCTCCGAGCCCACGAGACCTCTCTACATCTCGT 25694 1.8891605242357958 No Hit TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 24737 1.8187967575317536 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 23833 1.7523298347517602 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 15913 1.1700090068562394 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 9420 0.6926088634817933 No Hit ATACACATCTCCGAGCCCACGAGACCTCTCTACATCTCGTATG 8707 0.6401852838997849 No Hit CCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTG 8313 0.611216293219124 No Hit TCTCCGAGCCCACGAGACCTCTCTACATCTCGTATGCCGTCTT 8021 0.5897468889583295 RNA PCR Primer, Index 39 (95% over 23bp) GTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGAAGC 7972 0.5861441464625113 No Hit ACACATCTCCGAGCCCACGAGACCTCTCTACATCTCGTATGCC 6734 0.4951197544253074 No Hit GAGTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGAA 5323 0.39137547561715347 No Hit CATCTCCGAGCCCACGAGACCTCTCTACATCTCGTATGCCGTC 5293 0.389169714905428 RNA PCR Primer, Index 39 (95% over 21bp) CATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCG 4829 0.35505394923074096 No Hit ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3499 0.2572652243442457 No Hit ACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAGAGTACAT 3379 0.2484421814973439 No Hit GGTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAG 3360 0.2470451997132511 No Hit TATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAGAG 3212 0.23616344686873883 No Hit GCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGATACCAC 2695 0.1981508372700035 No Hit AACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2656 0.19528334834476038 No Hit GAACAGTGGTATCAACGCAAAAAAAAAAAAAAAAAAAAAAAAA 2627 0.19315111299009247 No Hit TCCATGTACTCTGCGTTGATACCACTGCTTCCATGTACTCTGC 2586 0.19013657335073433 No Hit ACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCGTTGAT 2531 0.186092678712571 No Hit GTACATGGAAGCAGTGGTATCAACGCAGAGTACATGGAAGCAG 2445 0.1797694980056247 No Hit GCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2441 0.17947539657739464 No Hit GAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2432 0.178813668363877 No Hit GCTTCCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTAC 2092 0.15381504696432183 No Hit GTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGC 1988 0.14616840983034024 No Hit GTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAACGCAGA 1933 0.1421245151921769 No Hit GGGTAGGCACACGCTGAGCCAGTCAGTGTAGCGCGCGTGCAGC 1897 0.13947760233810635 No Hit CAGTGGTATCAACGCAGAGTACATGGGAAGCAGTGGTATCAAC 1824 0.13411025127290774 No Hit GTACATGGGAATGGTATCAACGCAAAAAAAAAAAAAAAAAAAA 1773 0.13036045806297447 No Hit CTGCTTCCCATGTACTCTGCGTTGATACCACTGCTTCCCATGT 1719 0.12639008878186864 No Hit GTGTAGCGCGCGTGCAGCCCCGGACATCTAAGGGCATCACAGA 1682 0.12366965057074059 No Hit GAGTACATGGAAGCAGTGGTATCAACGCAGAGTACATGGAAGC 1643 0.12080216164549748 No Hit CACATCTCCGAGCCCACGAGACCTCTCTACATCTCGTATGCCG 1622 0.11925812914728967 No Hit CTCCGAGCCCACGAGACCTCTCTACATCTCGTATGCCGTCTTC 1619 0.11903755307611712 RNA PCR Primer, Index 39 (95% over 24bp) GTTGATACCACTGCTTCCCATGTACTCTGCGTTGATACCACTG 1523 0.11197911879859566 No Hit TCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1500 0.1102880355862728 No Hit CATGTACTCTGCGTTGATACCACTGCTTCCATGTACTCTGCGT 1480 0.10881752844512252 No Hit GAATGGTATCAACGCAAAAAAAAAAAAAAAAAAAAAAAAAAAA 1420 0.1044060070216716 No Hit CAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1394 0.10249434773817621 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 7.352535705751521E-5 0.0 3 0.0 0.0 0.0 1.4705071411503042E-4 7.352535705751521E-5 4 0.0 0.0 0.0 2.2057607117254564E-4 7.352535705751521E-5 5 0.0 0.0 0.0 3.6762678528757603E-4 7.352535705751521E-5 6 0.0 0.0 0.0 3.6762678528757603E-4 7.352535705751521E-5 7 0.0 0.0 0.0 3.6762678528757603E-4 7.352535705751521E-5 8 0.0 0.0 0.0 4.411521423450913E-4 7.352535705751521E-5 9 0.0 0.0 0.0 7.352535705751521E-4 7.352535705751521E-5 10 0.0 0.0 0.0 8.087789276326673E-4 7.352535705751521E-5 11 0.0 0.0 0.0 8.823042846901825E-4 7.352535705751521E-5 12 0.0 0.0 0.0 8.823042846901825E-4 7.352535705751521E-5 13 0.0 0.0 0.0 8.823042846901825E-4 7.352535705751521E-5 14 0.0 0.0 0.0 9.558296417476978E-4 7.352535705751521E-5 15 0.0 0.0 0.0 0.001029354998805213 1.4705071411503042E-4 16 0.0 0.0 0.0 0.0012499310699777585 1.4705071411503042E-4 17 0.0 0.0 0.0 0.0016175578552653346 1.4705071411503042E-4 18 0.0 0.0 0.0 0.0018381339264378802 1.4705071411503042E-4 19 0.0 0.0 0.0 0.002132235354667941 1.4705071411503042E-4 20 0.0 0.0 0.0 0.002426336782898002 1.4705071411503042E-4 21 0.0 0.0 0.0 0.003823318566990791 2.2057607117254564E-4 22 0.0 0.0 0.0 0.0052938257081410955 2.9410142823006085E-4 23 0.0 0.0 0.0 0.007793687848096613 4.411521423450913E-4 24 0.0 0.0 0.0 0.01044060070216716 4.411521423450913E-4 25 0.0 0.0 0.0 0.012352259985662556 4.411521423450913E-4 26 0.0 0.0 0.0 0.016249103909710863 4.411521423450913E-4 27 0.0 0.0 0.0 0.025586824256015293 5.146774994026065E-4 28 0.0 0.0 0.0 0.046615076374464645 5.146774994026065E-4 29 0.0 0.0 0.0 0.07102549491755969 5.146774994026065E-4 30 0.0 0.0 0.0 0.1357278091281731 5.146774994026065E-4 31 0.0 0.0 0.0 0.2407220190063048 5.146774994026065E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TATACAC 3170 0.0 32.68139 3 TTATACA 3215 0.0 32.39658 2 CTTATAC 3255 0.0 31.827957 1 GCCGTCT 1130 0.0 25.539824 36 TACACAT 4155 0.0 25.200962 5 ATACACA 4140 0.0 25.113527 4 ACGTTTA 55 1.9029918E-5 23.545454 26 TACCGAC 55 1.9029918E-5 23.545454 33 CCGTCTT 1280 0.0 22.691406 37 CGAATAC 50 2.7024548E-4 22.2 34 ATACCGA 50 2.7024548E-4 22.2 32 GTACGAA 50 2.7024548E-4 22.2 31 ACACATC 4970 0.0 21.515089 6 TGCGACG 70 5.1030584E-6 21.142857 22 ACGAATA 45 0.0038261632 20.555555 33 CACATCT 5300 0.0 20.35 7 GCGCATA 65 6.903318E-5 19.923077 26 AACACAT 160 0.0 19.65625 5 TAGGTCG 85 1.2456512E-6 19.588236 21 ATCGTCA 85 1.2456512E-6 19.588236 10 >>END_MODULE