##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2727469.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 4115294 Sequences flagged as poor quality 0 Sequence length 43 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.129448345610303 31.0 31.0 34.0 30.0 34.0 2 31.40551999444025 31.0 31.0 34.0 30.0 34.0 3 31.486857804083986 31.0 31.0 34.0 28.0 34.0 4 35.29739138929078 37.0 35.0 37.0 33.0 37.0 5 35.11195506323485 37.0 35.0 37.0 32.0 37.0 6 35.140911925126126 37.0 35.0 37.0 32.0 37.0 7 35.04442088463181 37.0 35.0 37.0 32.0 37.0 8 35.054838609343584 37.0 35.0 37.0 32.0 37.0 9 36.62514561535579 39.0 35.0 39.0 32.0 39.0 10 36.39374295007841 38.0 35.0 39.0 32.0 39.0 11 36.51881275068075 38.0 35.0 39.0 32.0 39.0 12 36.348860373037745 38.0 35.0 39.0 32.0 39.0 13 36.45957202571675 38.0 35.0 39.0 32.0 39.0 14 37.47166690885268 39.0 36.0 41.0 32.0 41.0 15 37.42402414019509 39.0 36.0 41.0 32.0 41.0 16 37.35703232867445 39.0 36.0 41.0 32.0 41.0 17 37.3662287554668 39.0 36.0 41.0 32.0 41.0 18 37.37760631439698 39.0 36.0 41.0 32.0 41.0 19 37.39336630627119 39.0 36.0 41.0 31.0 41.0 20 37.39954496568168 39.0 36.0 41.0 32.0 41.0 21 37.34255559870085 39.0 36.0 41.0 31.0 41.0 22 37.25242570761652 39.0 36.0 41.0 31.0 41.0 23 37.154436110761466 39.0 36.0 41.0 31.0 41.0 24 37.048584378175654 39.0 36.0 41.0 31.0 41.0 25 36.937832388159876 39.0 36.0 40.0 31.0 41.0 26 36.72606015511893 39.0 35.0 40.0 30.0 41.0 27 36.59983053458635 39.0 35.0 40.0 30.0 41.0 28 36.444341036144685 38.0 35.0 40.0 30.0 41.0 29 36.26912487904874 38.0 35.0 40.0 30.0 41.0 30 36.33098534393898 38.0 35.0 40.0 30.0 41.0 31 36.29142632336839 38.0 35.0 40.0 30.0 41.0 32 36.183077563838694 38.0 35.0 40.0 30.0 41.0 33 36.026350972737305 38.0 35.0 40.0 29.0 41.0 34 35.980705145246 38.0 35.0 40.0 29.0 41.0 35 35.841669392271854 38.0 34.0 40.0 28.0 41.0 36 35.72549397442807 38.0 34.0 40.0 28.0 41.0 37 35.58074951631645 38.0 34.0 40.0 27.0 41.0 38 35.41765278495291 38.0 34.0 40.0 27.0 41.0 39 35.25115167956408 38.0 34.0 40.0 26.0 41.0 40 35.05758713715229 38.0 33.0 40.0 25.0 41.0 41 34.86042090795943 38.0 33.0 40.0 25.0 41.0 42 34.64642599046387 38.0 33.0 40.0 24.0 41.0 43 34.37579915311032 37.0 33.0 40.0 23.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 12 2.0 13 2.0 14 5.0 15 15.0 16 29.0 17 146.0 18 307.0 19 748.0 20 1595.0 21 3249.0 22 5862.0 23 10270.0 24 16658.0 25 25754.0 26 38523.0 27 54983.0 28 74657.0 29 98624.0 30 125188.0 31 154626.0 32 188254.0 33 227319.0 34 276773.0 35 335479.0 36 418131.0 37 542962.0 38 723841.0 39 791292.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 42.0828742733812 20.15724757453538 12.925540678260166 24.834337473823258 2 18.734627465255215 23.353228226221503 32.808785957941275 25.103358350582 3 20.88251774964316 25.16901587104105 30.554973715122173 23.393492664193616 4 14.835343477282548 17.792021663579806 32.07564271228252 35.296992146855125 5 13.838014975357776 38.006737793217205 33.192233653294274 14.963013578130749 6 33.028575844155974 34.456906359545634 15.936698568802132 16.577819227496263 7 26.668106822987614 32.13332996378874 20.759343074881162 20.439220138342485 8 28.737485098270017 32.15848005027102 20.249804752710258 18.85423009874872 9 26.646504478173373 13.449585861909258 19.868106628590812 40.03580303132656 10 18.541008248742376 27.806421606815938 30.561194412841463 23.091375731600223 11 34.7902482787378 22.05050234564043 20.876540047928533 22.282709327693233 12 20.928249597720114 27.53691473804788 27.895017950114863 23.639817714117147 13 30.55609149674361 19.072051717325664 26.263907268836682 24.107949517094042 14 22.799318833599738 21.921131272759613 25.07317824680327 30.206371646837383 15 26.25717627950761 26.69155593743728 22.512510649299905 24.538757133755208 16 25.432909532101473 24.93245926050484 25.658142528820544 23.976488678573148 17 23.106830277496577 28.00120720415115 25.38729918202685 23.504663336325425 18 24.42807245363272 22.886165605665113 27.70110713839643 24.98465480230574 19 23.062896599854106 25.682296331683713 28.053499944353916 23.201307124108265 20 23.152367728769804 23.74498638493386 27.932901027241307 25.169744859055026 21 24.678577034836394 24.378962961090995 27.954892165663015 22.9875678384096 22 24.32200469759876 26.032161979192736 27.191933310232514 22.453900012975986 23 23.177566414453015 24.1046933706316 27.797333556241664 24.92040665867372 24 23.480655331065048 26.190473876228527 27.916401598524914 22.412469194181508 25 23.19411444237034 25.655080779161825 27.064603403790834 24.086201374676996 26 24.422969537534865 25.557930976498884 27.855409601355337 22.163689884610918 27 24.05555957848941 25.88894013404632 27.316784657426663 22.73871563003761 28 22.87532798385729 24.990025014008722 28.38171464784776 23.75293235428623 29 22.633935752828354 25.080127932536534 29.41629443728686 22.86964187734825 30 21.69575247843775 27.097043370412905 29.023175500948412 22.184028650200933 31 24.596177089656294 25.592266311957303 26.749048792139764 23.06250780624665 32 23.424790549593784 25.539900672953138 27.63394304270849 23.40136573474459 33 22.07431595409708 25.15623428119595 27.988814407913505 24.78063535679346 34 22.91245777336929 27.03223633597017 27.46625149989284 22.589054390767707 35 22.306863130556405 25.430844066061866 30.38361293263616 21.878679870745565 36 23.126926047081934 26.28077119156007 27.219829251567447 23.372473509790552 37 22.900818264746093 26.74056823157714 27.9204110326018 22.43820247107497 38 22.062725044674817 25.129504720683382 28.935089449259277 23.872680785382528 39 23.338162473932602 25.036315752896392 27.060423872510686 24.56509790066032 40 22.344843406084717 25.217906667178582 29.68395453641951 22.753295390317195 41 21.990992624099277 26.180097946829555 27.825691189985452 24.003218239085715 42 23.77331971907718 25.758840073151518 28.529456218680853 21.93838398909045 43 22.381900296795322 24.407782287243634 28.80919321924509 24.401124196715955 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 776.0 1 1016.5 2 1257.0 3 3281.5 4 5306.0 5 5306.0 6 7924.5 7 10543.0 8 9787.0 9 9031.0 10 12126.5 11 15222.0 12 15222.0 13 27600.5 14 39979.0 15 61954.0 16 83929.0 17 72116.0 18 60303.0 19 60303.0 20 67919.0 21 75535.0 22 55934.0 23 36333.0 24 40376.0 25 44419.0 26 44419.0 27 50797.0 28 57175.0 29 62044.5 30 66914.0 31 73775.5 32 80637.0 33 80637.0 34 90918.5 35 101200.0 36 117254.5 37 133309.0 38 151018.5 39 168728.0 40 168728.0 41 186700.0 42 204672.0 43 217837.5 44 231003.0 45 257619.5 46 284236.0 47 284236.0 48 331889.5 49 379543.0 50 399101.5 51 418660.0 52 363732.5 53 308805.0 54 308805.0 55 303483.0 56 298161.0 57 282526.5 58 266892.0 59 242193.5 60 217495.0 61 217495.0 62 189257.5 63 161020.0 64 150011.0 65 139002.0 66 118516.0 67 98030.0 68 98030.0 69 75899.5 70 53769.0 71 44520.5 72 35272.0 73 23643.5 74 12015.0 75 12015.0 76 9221.5 77 6428.0 78 5644.0 79 4860.0 80 3620.5 81 2381.0 82 2381.0 83 1831.0 84 1281.0 85 1000.0 86 719.0 87 494.0 88 269.0 89 269.0 90 179.0 91 89.0 92 76.0 93 63.0 94 44.5 95 26.0 96 26.0 97 16.0 98 6.0 99 3.5 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 4115294.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 44.00793386098529 #Duplication Level Percentage of deduplicated Percentage of total 1 81.41196912298938 35.82772552657094 2 10.4208842258645 9.172031675696598 3 3.1546804426924675 4.164929048236618 4 1.4275432684920586 2.5129291897397312 5 0.8001946195773503 1.760745594713816 6 0.5272565845661087 1.3922083740812587 7 0.3707311504459244 1.142057836432186 8 0.27466116081725755 0.9669816159541853 9 0.20323998411952648 0.804975460113584 >10 1.181409595422545 9.586156304766313 >50 0.10669975157255203 3.2633429166428716 >100 0.09261761427501976 8.486257663827262 >500 0.014662587177628663 4.369643425455137 >1k 0.012512809349339345 10.278935424335742 >5k 5.512250814686937E-4 1.6691392605704811 >10k+ 3.858575570280856E-4 4.601940682863425 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CTTATACACATCTCCGAGCCCACGAGACTAGGCATGATCTCGT 43297 1.052099801375066 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 40026 0.9726158082508808 No Hit TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 39354 0.9562864767377494 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 27203 0.6610220314757584 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 15298 0.3717352879283959 No Hit ATACACATCTCCGAGCCCACGAGACTAGGCATGATCTCGTATG 13892 0.3375700496732433 No Hit ACACATCTCCGAGCCCACGAGACTAGGCATGATCTCGTATGCC 10636 0.25845055055604776 No Hit GTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGAAGC 8797 0.21376358529913048 No Hit TCTCCGAGCCCACGAGACTAGGCATGATCTCGTATGCCGTCTT 8783 0.21342339089260695 TruSeq Adapter, Index 1 (95% over 21bp) CCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTG 8516 0.20693539756819318 No Hit CATCTCCGAGCCCACGAGACTAGGCATGATCTCGTATGCCGTC 8104 0.19692396217621388 No Hit GGGTAGGCACACGCTGAGCCAGTCAGTGTAGCGCGCGTGCAGC 6801 0.16526158276905611 No Hit GTGTAGCGCGCGTGCAGCCCCGGACATCTAAGGGCATCACAGA 6285 0.15272298892861602 No Hit ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTT 5670 0.13777873464204501 No Hit GAGTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGAA 5613 0.1363936574154848 No Hit GTACATGGGGAATAATTGCAATCCCCGATCCCCATCACGAATG 5199 0.12633362282257354 No Hit GCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAATGTTTT 5039 0.12244568674801849 No Hit CATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCG 4883 0.1186549490753273 No Hit CCTTAGATGTCCGGGGCTGCACGCGCGCTACACTGACTGGCTC 4506 0.10949399969965694 No Hit GGATTGACAGATTGATAGCTCTTTCTCGATTCCGTGGGTGGTG 4349 0.10567896242649978 No Hit AACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 4347 0.10563036322556786 No Hit GCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 4285 0.10412378799667776 No Hit AGTCAGTGTAGCGCGCGTGCAGCCCCGGACATCTAAGGGCATC 4197 0.10198542315567247 No Hit GAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 4178 0.10152373074681907 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 2.429960046596914E-5 0.0 2 0.0 0.0 0.0 7.289880139790742E-5 0.0 3 0.0 0.0 0.0 7.289880139790742E-5 0.0 4 0.0 2.429960046596914E-5 0.0 1.943968037277531E-4 0.0 5 0.0 2.429960046596914E-5 0.0 3.644940069895371E-4 0.0 6 0.0 2.429960046596914E-5 0.0 3.644940069895371E-4 0.0 7 0.0 2.429960046596914E-5 0.0 3.644940069895371E-4 0.0 8 0.0 2.429960046596914E-5 0.0 3.644940069895371E-4 0.0 9 0.0 4.859920093193828E-5 0.0 5.102916097853519E-4 2.429960046596914E-5 10 0.0 4.859920093193828E-5 0.0 5.588908107172902E-4 2.429960046596914E-5 11 0.0 4.859920093193828E-5 0.0 6.317896121151976E-4 2.429960046596914E-5 12 0.0 4.859920093193828E-5 0.0 6.317896121151976E-4 7.289880139790742E-5 13 0.0 7.289880139790742E-5 0.0 6.560892125811668E-4 1.2149800232984569E-4 14 0.0 9.719840186387655E-5 0.0 6.803888130471359E-4 1.2149800232984569E-4 15 0.0 9.719840186387655E-5 0.0 7.532876144450433E-4 1.4579760279581484E-4 16 0.0 9.719840186387655E-5 0.0 9.719840186387655E-4 1.7009720326178397E-4 17 0.0 9.719840186387655E-5 0.0 0.0011906804228324877 1.7009720326178397E-4 18 0.0 9.719840186387655E-5 0.0 0.001239279623764426 1.943968037277531E-4 19 0.0 1.2149800232984569E-4 0.0 0.001433676427492179 1.943968037277531E-4 20 0.0 1.2149800232984569E-4 0.0 0.0016280732312199324 2.1869640419372224E-4 21 0.0 1.2149800232984569E-4 0.0 0.001919668436811562 2.1869640419372224E-4 22 0.0 1.2149800232984569E-4 0.0 0.002794454053586451 2.6729560512566054E-4 23 0.0 1.2149800232984569E-4 0.0 0.0040823328782828155 2.915952055916297E-4 24 0.0 1.2149800232984569E-4 0.0 0.006172098518356161 2.915952055916297E-4 25 0.0 1.2149800232984569E-4 0.0 0.007387078541654618 2.915952055916297E-4 26 0.0 1.2149800232984569E-4 0.0 0.010497427401298668 3.158948060575988E-4 27 0.0 1.2149800232984569E-4 0.0 0.020484563192811982 3.158948060575988E-4 28 0.0 1.2149800232984569E-4 0.0 0.044443969252257555 3.158948060575988E-4 29 0.0 1.2149800232984569E-4 0.0 0.07404088261980797 3.158948060575988E-4 30 0.0 1.2149800232984569E-4 0.0 0.12317467476199756 3.158948060575988E-4 31 0.0 1.4579760279581484E-4 0.0 0.2174814241704238 3.158948060575988E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TATACAC 6085 0.0 30.068201 3 TTATACA 6255 0.0 29.132694 2 CTTATAC 6250 0.0 29.008001 1 TACACAT 7665 0.0 24.087412 5 GCCGTCT 1495 0.0 23.759197 36 ATACACA 7790 0.0 23.748396 4 ACACATC 9090 0.0 20.840485 6 ACATCTC 9460 0.0 20.299154 8 CACATCT 9525 0.0 20.063519 7 ATCTCCG 9775 0.0 19.38005 10 CCGTCTT 2085 0.0 18.278177 37 CATCTCC 10775 0.0 17.82181 9 TCTCCGA 10815 0.0 17.4822 11 CCCACGA 10870 0.0 17.291628 19 CACGAGA 10855 0.0 17.264393 21 GCCCACG 10960 0.0 17.217154 18 GAGACTA 10880 0.0 17.15671 24 TCCGAGC 10990 0.0 17.153322 13 GACTAGG 10910 0.0 17.143446 26 AGACTAG 10925 0.0 17.08604 25 >>END_MODULE