##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2727466.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2805966 Sequences flagged as poor quality 0 Sequence length 43 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.290917994017033 31.0 31.0 34.0 30.0 34.0 2 31.576806347617897 31.0 31.0 34.0 30.0 34.0 3 31.674543811293507 31.0 31.0 34.0 30.0 34.0 4 35.46215599191152 37.0 35.0 37.0 33.0 37.0 5 35.26968466474647 37.0 35.0 37.0 33.0 37.0 6 35.267682145827855 37.0 35.0 37.0 32.0 37.0 7 35.20702210931993 37.0 35.0 37.0 32.0 37.0 8 35.187844756493845 37.0 35.0 37.0 32.0 37.0 9 36.81398705472554 39.0 37.0 39.0 32.0 39.0 10 36.58543047207272 39.0 35.0 39.0 32.0 39.0 11 36.710846460719765 39.0 35.0 39.0 32.0 39.0 12 36.55059719184053 39.0 35.0 39.0 32.0 39.0 13 36.66657258142116 39.0 35.0 39.0 32.0 39.0 14 37.75878538799116 40.0 37.0 41.0 32.0 41.0 15 37.72579603601754 40.0 37.0 41.0 32.0 41.0 16 37.6996884495393 39.0 37.0 41.0 32.0 41.0 17 37.603344088987534 39.0 36.0 41.0 32.0 41.0 18 37.63728320300388 39.0 36.0 41.0 32.0 41.0 19 37.67517104626357 39.0 37.0 41.0 32.0 41.0 20 37.639053359876776 39.0 37.0 41.0 32.0 41.0 21 37.590664320237664 39.0 36.0 41.0 32.0 41.0 22 37.51425676576267 39.0 36.0 41.0 32.0 41.0 23 37.40267130820545 39.0 36.0 41.0 32.0 41.0 24 37.36710138326694 39.0 36.0 41.0 31.0 41.0 25 37.25092285508805 39.0 36.0 41.0 31.0 41.0 26 37.08775979466608 39.0 36.0 41.0 31.0 41.0 27 37.02282315608956 39.0 36.0 40.0 31.0 41.0 28 36.917582394084604 39.0 36.0 40.0 30.0 41.0 29 36.80569579246505 39.0 36.0 40.0 30.0 41.0 30 36.90808441727376 39.0 36.0 40.0 30.0 41.0 31 36.87562572034016 39.0 36.0 40.0 30.0 41.0 32 36.866981638409015 39.0 35.0 40.0 30.0 41.0 33 36.74512805928511 39.0 35.0 40.0 30.0 41.0 34 36.711158652670775 39.0 35.0 40.0 30.0 41.0 35 36.615614016705834 39.0 35.0 40.0 30.0 41.0 36 36.57380310381523 39.0 35.0 40.0 30.0 41.0 37 36.49415032113718 39.0 35.0 40.0 30.0 41.0 38 36.3830099865786 38.0 35.0 40.0 30.0 41.0 39 36.28588051316374 38.0 35.0 40.0 30.0 41.0 40 36.15702791837107 38.0 35.0 40.0 29.0 41.0 41 36.05223726873383 38.0 35.0 40.0 29.0 41.0 42 35.94911021730128 38.0 35.0 40.0 28.0 41.0 43 35.77535044972035 38.0 34.0 40.0 27.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 13 2.0 14 3.0 15 3.0 16 21.0 17 54.0 18 102.0 19 274.0 20 561.0 21 1160.0 22 2358.0 23 4219.0 24 7195.0 25 11579.0 26 18065.0 27 27059.0 28 39061.0 29 53232.0 30 71356.0 31 92151.0 32 114559.0 33 141478.0 34 176449.0 35 217900.0 36 274884.0 37 355655.0 38 510050.0 39 686536.0 >>END_MODULE >>Per base sequence content warn #Base G A T C 1 40.63513242854689 20.77355890983711 12.823177472570944 25.768131189045057 2 18.016576109617866 22.510073179789064 35.038129471276555 24.435221239316512 3 19.643930111768995 24.87385805815181 31.121189636652762 24.361022193426436 4 14.17130499799356 17.749787417238842 34.63473898115657 33.44416860361102 5 13.775576753246476 37.306831230314266 34.64026292549517 14.277329090944082 6 32.31899459936435 36.308993052659936 16.394175838196187 14.977836509779518 7 26.75324647554532 31.804020433604684 21.838218994813193 19.6045140960368 8 26.58189728599705 34.18042128806978 20.74768546732213 18.489995958611043 9 25.936593672197027 14.383709567400318 20.30010342249336 39.3795933379093 10 16.638013432807096 28.119086261202025 33.51277242846136 21.73012787752952 11 34.46371053676345 22.24535151174319 22.511641267214213 20.77929668427914 12 20.22102192257497 26.82748115978597 30.016899705841055 22.934597211798007 13 29.71960458537274 20.749574299902424 25.964249032240588 23.56657208248425 14 21.800941280115296 21.958676619745216 25.94600219674793 30.29437990339156 15 24.3650849653916 28.50444374593277 22.853127942391318 24.27734334628431 16 24.762630766017836 26.49543864751034 25.26017777834799 23.481752808123833 17 22.372544784933247 28.433095768088425 25.888553175626505 23.305806271351827 18 23.5565933443242 25.467664255375865 27.109059767652212 23.866682632647723 19 22.967919069582454 26.63392927783159 27.34491437173508 23.053237280850873 20 23.038625557116514 25.70890025039505 27.376846333847237 23.875627858641195 21 24.16932350570178 25.602733604042243 27.220821635044757 23.007121255211217 22 23.507626250638815 27.1193592509674 27.07081981748888 22.3021946809049 23 23.768106954966665 25.482739277667655 26.94615686718941 23.802996900176268 24 23.686174387002552 26.698826714222484 27.100292733411596 22.51470616536337 25 23.25209927704042 26.735320385207807 26.883611561936245 23.12896877581553 26 24.131725045848736 26.567784499170692 26.927375456438174 22.37311499854239 27 23.241942347127516 27.279767466890192 26.819426892556784 22.658863293425508 28 23.34522228708402 25.90230957894714 27.39844317429363 23.354024959675208 29 22.749990555837098 27.154890686487292 27.216545032976164 22.878573724699443 30 22.68758780398622 27.03575168052642 27.541495513488044 22.73516500199931 31 24.005707838227547 25.952345823149674 27.00970004625858 23.032246292364196 32 22.84297101247841 26.941737711718535 27.083542708642945 23.131748567160116 33 23.307303082075833 26.060828962289634 27.360060670728014 23.27180728490652 34 23.989456750366898 26.191479155485137 27.13087043820203 22.688193655945938 35 22.641079756490278 25.80109666332379 28.228959296014278 23.328864284171654 36 22.556367397181575 27.00927238605172 27.14840450668326 23.285955710083446 37 23.044434608259685 26.4633641319959 27.627633406819612 22.864567852924804 38 22.351411243044286 25.616561284064026 28.52215600616686 23.509871466724828 39 23.07978785202672 25.72340505907769 27.362555355268025 23.83425173362756 40 22.444070954530453 25.503480797700327 29.196469237332167 22.855979010437046 41 22.608827049222977 25.883884551701623 27.79691557203473 23.710372827040672 42 23.10498416588084 25.63306184037868 28.31684346852385 22.945110525216627 43 22.301838297399186 25.151801554259745 28.763498916237758 23.78286123210331 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 1336.0 1 1207.5 2 1079.0 3 1808.0 4 2537.0 5 2537.0 6 3382.5 7 4228.0 8 3717.5 9 3207.0 10 4581.0 11 5955.0 12 5955.0 13 10027.0 14 14099.0 15 19864.5 16 25630.0 17 24937.0 18 24244.0 19 24244.0 20 29588.5 21 34933.0 22 32448.0 23 29963.0 24 36459.0 25 42955.0 26 42955.0 27 51038.5 28 59122.0 29 65044.0 30 70966.0 31 79177.0 32 87388.0 33 87388.0 34 98148.5 35 108909.0 36 119093.5 37 129278.0 38 138807.0 39 148336.0 40 148336.0 41 158176.5 42 168017.0 43 175817.0 44 183617.0 45 191730.0 46 199843.0 47 199843.0 48 208569.0 49 217295.0 50 229200.5 51 241106.0 52 222460.0 53 203814.0 54 203814.0 55 200174.5 56 196535.0 57 182546.5 58 168558.0 59 150138.0 60 131718.0 61 131718.0 62 116515.5 63 101313.0 64 89500.0 65 77687.0 66 65081.5 67 52476.0 68 52476.0 69 41112.0 70 29748.0 71 24119.5 72 18491.0 73 13832.5 74 9174.0 75 9174.0 76 7303.0 77 5432.0 78 4341.0 79 3250.0 80 2489.0 81 1728.0 82 1728.0 83 1327.5 84 927.0 85 797.0 86 667.0 87 451.0 88 235.0 89 235.0 90 168.5 91 102.0 92 69.5 93 37.0 94 31.5 95 26.0 96 26.0 97 14.5 98 3.0 99 2.5 100 2.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 2805966.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 62.59059052113081 #Duplication Level Percentage of deduplicated Percentage of total 1 84.05381246233173 52.60977757569728 2 9.492456542984948 11.882769210431999 3 2.730657100721221 5.127403213345806 4 1.1534026218168933 2.887686048325595 5 0.6679583799513831 2.0903954722347464 6 0.3948063015066046 1.4826695731657202 7 0.26689496495979376 1.1693579424765006 8 0.19165747028758168 0.9596763394468657 9 0.14918243737593467 0.8403675165667231 >10 0.8003983682164709 9.199144493010085 >50 0.061652166549617 2.6458340069163353 >100 0.032459468715218466 3.809192419722069 >500 0.0030130594254653806 1.3115842940967148 >1k 0.0012507039123679162 1.277531495074628 >5k 2.2740071133962116E-4 1.0269925635975798 >10k+ 1.7055053350471585E-4 1.6796178358913647 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CTTATACACATCTCCGAGCCCACGAGACAAGAGGCAATCTCGT 22405 0.7984772445567766 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 13653 0.4865704003541026 No Hit TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 11145 0.3971894171205211 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 9030 0.32181430566157965 No Hit ATACACATCTCCGAGCCCACGAGACAAGAGGCAATCTCGTATG 7396 0.2635812408275795 No Hit ACACATCTCCGAGCCCACGAGACAAGAGGCAATCTCGTATGCC 6283 0.22391575664138486 No Hit TCTCCGAGCCCACGAGACAAGAGGCAATCTCGTATGCCGTCTT 6153 0.21928277106707636 RNA PCR Primer, Index 33 (95% over 22bp) CATCTCCGAGCCCACGAGACAAGAGGCAATCTCGTATGCCGTC 4946 0.17626728192715094 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 4636 0.16521939324995386 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 3.5638350571603505E-5 0.0 2 0.0 3.5638350571603505E-5 0.0 3.5638350571603505E-5 0.0 3 3.5638350571603505E-5 3.5638350571603505E-5 0.0 7.127670114320701E-5 0.0 4 3.5638350571603505E-5 3.5638350571603505E-5 0.0 1.0691505171481051E-4 0.0 5 7.127670114320701E-5 7.127670114320701E-5 0.0 1.0691505171481051E-4 0.0 6 7.127670114320701E-5 7.127670114320701E-5 0.0 1.0691505171481051E-4 0.0 7 7.127670114320701E-5 7.127670114320701E-5 0.0 1.0691505171481051E-4 0.0 8 7.127670114320701E-5 7.127670114320701E-5 0.0 1.0691505171481051E-4 3.5638350571603505E-5 9 7.127670114320701E-5 7.127670114320701E-5 0.0 1.0691505171481051E-4 7.127670114320701E-5 10 7.127670114320701E-5 7.127670114320701E-5 0.0 1.0691505171481051E-4 7.127670114320701E-5 11 7.127670114320701E-5 7.127670114320701E-5 0.0 1.7819175285801753E-4 1.0691505171481051E-4 12 7.127670114320701E-5 7.127670114320701E-5 0.0 2.1383010342962102E-4 1.0691505171481051E-4 13 7.127670114320701E-5 7.127670114320701E-5 0.0 2.8510680457282804E-4 1.0691505171481051E-4 14 7.127670114320701E-5 7.127670114320701E-5 0.0 3.2074515514443153E-4 1.0691505171481051E-4 15 7.127670114320701E-5 7.127670114320701E-5 0.0 3.5638350571603507E-4 1.0691505171481051E-4 16 7.127670114320701E-5 7.127670114320701E-5 0.0 3.9202185628763855E-4 1.0691505171481051E-4 17 7.127670114320701E-5 7.127670114320701E-5 0.0 4.989369080024491E-4 1.0691505171481051E-4 18 7.127670114320701E-5 7.127670114320701E-5 0.0 4.989369080024491E-4 1.4255340228641402E-4 19 7.127670114320701E-5 7.127670114320701E-5 0.0 4.989369080024491E-4 1.4255340228641402E-4 20 7.127670114320701E-5 7.127670114320701E-5 0.0 4.989369080024491E-4 1.4255340228641402E-4 21 7.127670114320701E-5 7.127670114320701E-5 0.0 4.989369080024491E-4 1.4255340228641402E-4 22 7.127670114320701E-5 7.127670114320701E-5 0.0 6.771286608604665E-4 1.4255340228641402E-4 23 7.127670114320701E-5 7.127670114320701E-5 0.0 9.978738160048982E-4 1.4255340228641402E-4 24 7.127670114320701E-5 7.127670114320701E-5 0.0 0.0018175558791517787 1.4255340228641402E-4 25 7.127670114320701E-5 7.127670114320701E-5 0.0 0.0027441529940134698 1.4255340228641402E-4 26 7.127670114320701E-5 7.127670114320701E-5 0.0 0.004632985574308456 1.4255340228641402E-4 27 7.127670114320701E-5 7.127670114320701E-5 0.0 0.012045762493201984 1.4255340228641402E-4 28 7.127670114320701E-5 7.127670114320701E-5 0.0 0.027120784784990266 1.4255340228641402E-4 29 7.127670114320701E-5 7.127670114320701E-5 0.0 0.04615166399022654 1.4255340228641402E-4 30 7.127670114320701E-5 1.0691505171481051E-4 0.0 0.07348627887864642 1.7819175285801753E-4 31 7.127670114320701E-5 1.0691505171481051E-4 0.0 0.14857628353301502 1.7819175285801753E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CTTATAC 2985 0.0 28.075377 1 TATACAC 3145 0.0 27.529411 3 GCCGTCT 1035 0.0 26.096619 36 TTATACA 3410 0.0 25.281525 2 CCGTCTT 1145 0.0 23.58952 37 GGTATCA 3945 0.0 23.259823 1 TACACAT 4085 0.0 21.239902 5 ATACACA 4510 0.0 19.894678 4 ACACATC 4690 0.0 18.697227 6 ACATCTC 4920 0.0 18.011179 8 ATGCCGT 1555 0.0 17.607716 34 TGCCGTC 1540 0.0 17.418833 35 CACATCT 5080 0.0 17.225395 7 ATCTCCG 5090 0.0 16.937132 10 TATGCCG 1690 0.0 16.201183 33 GTATCAA 6230 0.0 14.817818 2 CGCACTA 100 1.0942564E-4 14.799999 29 TCTCCGA 5865 0.0 14.667519 11 CATCTCC 6025 0.0 14.523652 9 CGAGACA 5930 0.0 14.413154 23 >>END_MODULE