##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2727465.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 3192332 Sequences flagged as poor quality 0 Sequence length 43 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.268776555821887 31.0 31.0 34.0 30.0 34.0 2 31.553217835738888 31.0 31.0 34.0 30.0 34.0 3 31.653675119003914 31.0 31.0 34.0 30.0 34.0 4 35.44476075796628 37.0 35.0 37.0 33.0 37.0 5 35.25871337943547 37.0 35.0 37.0 33.0 37.0 6 35.25373488722351 37.0 35.0 37.0 32.0 37.0 7 35.188024616487255 37.0 35.0 37.0 32.0 37.0 8 35.17926738196403 37.0 35.0 37.0 32.0 37.0 9 36.79762787830339 39.0 37.0 39.0 32.0 39.0 10 36.563525347614224 39.0 35.0 39.0 32.0 39.0 11 36.69607233834075 39.0 35.0 39.0 32.0 39.0 12 36.52017083436184 39.0 35.0 39.0 32.0 39.0 13 36.641141021673185 39.0 35.0 39.0 32.0 39.0 14 37.72735010017755 39.0 37.0 41.0 32.0 41.0 15 37.688925525289974 39.0 37.0 41.0 32.0 41.0 16 37.6610487255085 39.0 36.0 41.0 32.0 41.0 17 37.61681209849101 39.0 36.0 41.0 32.0 41.0 18 37.61466789795046 39.0 36.0 41.0 32.0 41.0 19 37.645911515468946 39.0 37.0 41.0 32.0 41.0 20 37.61301048888399 39.0 36.0 41.0 32.0 41.0 21 37.55319528169376 39.0 36.0 41.0 32.0 41.0 22 37.472607485687575 39.0 36.0 41.0 32.0 41.0 23 37.39180761900705 39.0 36.0 41.0 32.0 41.0 24 37.32723664080052 39.0 36.0 41.0 31.0 41.0 25 37.221046871064786 39.0 36.0 41.0 31.0 41.0 26 37.0470778102027 39.0 36.0 41.0 31.0 41.0 27 36.9781019016819 39.0 36.0 40.0 31.0 41.0 28 36.84301413512129 39.0 36.0 40.0 30.0 41.0 29 36.701128203457536 39.0 35.0 40.0 30.0 41.0 30 36.806982481771946 39.0 35.0 40.0 30.0 41.0 31 36.76702642456988 39.0 35.0 40.0 30.0 41.0 32 36.752414849082115 39.0 35.0 40.0 30.0 41.0 33 36.620221205062634 39.0 35.0 40.0 30.0 41.0 34 36.58557067372692 39.0 35.0 40.0 30.0 41.0 35 36.495326300647925 39.0 35.0 40.0 30.0 41.0 36 36.42397000061397 38.0 35.0 40.0 30.0 41.0 37 36.32365023437412 38.0 35.0 40.0 30.0 41.0 38 36.21301230573762 38.0 35.0 40.0 29.0 41.0 39 36.105320185995694 38.0 35.0 40.0 29.0 41.0 40 35.9662970518104 38.0 35.0 40.0 28.0 41.0 41 35.840715502021716 38.0 34.0 40.0 28.0 41.0 42 35.72346829841007 38.0 34.0 40.0 27.0 41.0 43 35.55478753462986 38.0 34.0 40.0 27.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 11 1.0 12 2.0 13 5.0 14 6.0 15 13.0 16 35.0 17 70.0 18 163.0 19 349.0 20 699.0 21 1555.0 22 2966.0 23 5286.0 24 8992.0 25 14240.0 26 21988.0 27 32335.0 28 45969.0 29 62717.0 30 82945.0 31 105942.0 32 133347.0 33 163412.0 34 202716.0 35 250351.0 36 315831.0 37 410243.0 38 582653.0 39 747501.0 >>END_MODULE >>Per base sequence content warn #Base G A T C 1 41.35873085882045 20.418803558025918 12.704255071214398 25.51821051193923 2 18.438464420367307 22.49412028573469 34.3286663166613 24.738748977236703 3 20.19962209444381 24.61861736185334 30.451845234142315 24.729915309560536 4 14.45692365330423 17.264401071066544 34.323466356256176 33.95520891937305 5 14.046189431425052 37.39210082159374 34.047429903907236 14.514279843073966 6 32.9653682637019 35.70790882652556 16.235811312858438 15.090911596914106 7 27.287324751936833 31.667195016057224 21.62018236198491 19.425297870021037 8 27.233633594500823 33.55164813684792 20.409030138469305 18.80568813018195 9 26.405868813143496 14.160995786152569 20.12334556681448 39.30978983388946 10 17.012015041042098 27.7998967525934 33.02175337652851 22.166334829835996 11 35.05659812325285 22.161980646123272 21.865457602780662 20.91596362784322 12 20.613144246901637 26.762066100894266 29.788818957426734 22.83597069477736 13 30.01849431700713 20.521706388934486 25.681508063697635 23.77829123036075 14 22.20940679102299 21.67274581716438 25.83127318837765 30.28657420343498 15 24.827210954249118 28.201421406044236 22.816392530601455 24.15497510910519 16 24.802652105106862 26.325676652678982 25.113365401844167 23.758305840369985 17 22.88327153942635 27.699092700884492 25.838383977606338 23.579251782082817 18 23.635354969345293 25.1222617196457 27.136995776128547 24.105387534880457 19 23.34478368791216 26.05051730208512 27.27730073187876 23.327398278123955 20 23.573174719922616 25.212697175607047 27.27401160029721 23.940116504173126 21 24.26987543902075 25.424924475273876 27.17139069495278 23.133809390752592 22 24.284347617979584 25.992722561437848 27.05066390337847 22.6722659172041 23 23.77124309125743 25.353440682234808 26.921197419316034 23.954118807191733 24 23.595446839489124 26.004438134880708 27.151593255338103 23.248521770292065 25 23.712351973416297 25.967036010039056 26.99174146047466 23.328870556069983 26 23.95208267811744 26.08942302993548 26.928966034861034 23.029528257086042 27 24.06657578221814 26.05737749081236 26.977050006077064 22.89899672089244 28 23.41523375388274 25.762013474788965 27.33418704570828 23.488565725620017 29 23.076672476421624 25.74769792114354 27.303300533904366 23.872329068530465 30 23.411412096235605 26.206328163862658 27.57285269827825 22.80940704162349 31 23.43268181379631 26.260708472677653 26.85362925911215 23.45298045441389 32 23.653554830763216 25.959079444117965 27.031336339704016 23.3560293854148 33 23.462628573719776 25.698580222859025 27.242529912302356 23.596261291118843 34 23.442267282976832 25.992471960936392 27.09273346255966 23.472527293527115 35 23.00271400343072 25.754244859243965 28.411800527012854 22.831240610312463 36 23.255883160022204 26.174345274864898 27.11719833651387 23.45257322859903 37 23.41307232455772 26.10925179461284 27.329989487308964 23.147686393520473 38 22.629569856769283 25.55216687988593 27.926982531892047 23.891280731452742 39 23.304562307429176 25.583147366877878 27.275170627616426 23.837119698076517 40 22.793024033841093 25.4458182920824 28.52610568073747 23.23505199333904 41 22.687615197918014 25.875754777385307 27.784954697694346 23.65167532700233 42 23.267473433214338 25.610118245846607 28.081101840284784 23.041306480654267 43 22.533151313835777 25.09272218553709 28.228110359448827 24.146016141178297 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 1144.0 1 1089.0 2 1034.0 3 1944.0 4 2854.0 5 2854.0 6 3884.5 7 4915.0 8 4396.0 9 3877.0 10 5542.5 11 7208.0 12 7208.0 13 12326.0 14 17444.0 15 25442.5 16 33441.0 17 31403.5 18 29366.0 19 29366.0 20 34692.0 21 40018.0 22 36245.0 23 32472.0 24 38826.0 25 45180.0 26 45180.0 27 53560.5 28 61941.0 29 68180.0 30 74419.0 31 82787.0 32 91155.0 33 91155.0 34 102215.0 35 113275.0 36 125044.5 37 136814.0 38 147806.5 39 158799.0 40 158799.0 41 171473.5 42 184148.0 43 194047.0 44 203946.0 45 215312.5 46 226679.0 47 226679.0 48 237830.0 49 248981.0 50 246959.5 51 244938.0 52 241932.0 53 238926.0 54 238926.0 55 238840.5 56 238755.0 57 217303.5 58 195852.0 59 183134.5 60 170417.0 61 170417.0 62 149652.0 63 128887.0 64 113759.0 65 98631.0 66 82735.0 67 66839.0 68 66839.0 69 52401.0 70 37963.0 71 31167.5 72 24372.0 73 17929.0 74 11486.0 75 11486.0 76 9004.0 77 6522.0 78 5311.0 79 4100.0 80 3280.0 81 2460.0 82 2460.0 83 1939.5 84 1419.0 85 1219.5 86 1020.0 87 681.0 88 342.0 89 342.0 90 252.0 91 162.0 92 116.5 93 71.0 94 60.0 95 49.0 96 49.0 97 27.5 98 6.0 99 5.5 100 5.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 3192332.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 62.62792399601194 #Duplication Level Percentage of deduplicated Percentage of total 1 84.40824568433717 52.86313195355372 2 9.403676380104507 11.778654592325555 3 2.677703396130233 5.030970143301218 4 1.1175440456803258 2.7995785422025254 5 0.6360542395790886 1.9917378286850165 6 0.3753320528850875 1.4103760368812637 7 0.25527924153877296 1.1191326255794893 8 0.17935071547732273 0.8985890382035302 9 0.1389784418825442 0.7833538165773726 >10 0.7095823577473382 8.047689049318231 >50 0.05379005698916589 2.3168185090930056 >100 0.037621131997380895 4.627091733891088 >500 0.004544855944365296 2.0163723464155288 >1k 0.0020476823474010163 2.31649012507798 >5k 4.994347188782967E-5 0.18854715735849395 >10k+ 1.9977388755131867E-4 1.8114665015361346 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 16378 0.5130418765967951 No Hit CTTATACACATCTCCGAGCCCACGAGACCGAGGCTGATCTCGT 15234 0.4772060048892158 No Hit TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 14911 0.46708800964310726 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 11391 0.35682378900440176 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 6028 0.18882747784378318 No Hit ATACACATCTCCGAGCCCACGAGACCGAGGCTGATCTCGTATG 4814 0.15079885174850233 No Hit TCTCCGAGCCCACGAGACCGAGGCTGATCTCGTATGCCGTCTT 4490 0.1406495314397124 TruSeq Adapter, Index 10 (95% over 21bp) ACACATCTCCGAGCCCACGAGACCGAGGCTGATCTCGTATGCC 3951 0.12376532265441065 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 3.1325062681450426E-5 2 0.0 0.0 0.0 0.0 3.1325062681450426E-5 3 3.1325062681450426E-5 0.0 0.0 3.1325062681450426E-5 3.1325062681450426E-5 4 3.1325062681450426E-5 0.0 0.0 6.265012536290085E-5 3.1325062681450426E-5 5 3.1325062681450426E-5 0.0 0.0 1.5662531340725213E-4 3.1325062681450426E-5 6 3.1325062681450426E-5 0.0 0.0 1.5662531340725213E-4 6.265012536290085E-5 7 3.1325062681450426E-5 0.0 0.0 1.5662531340725213E-4 6.265012536290085E-5 8 3.1325062681450426E-5 6.265012536290085E-5 0.0 1.5662531340725213E-4 6.265012536290085E-5 9 3.1325062681450426E-5 1.5662531340725213E-4 0.0 1.8795037608870254E-4 9.397518804435127E-5 10 3.1325062681450426E-5 1.5662531340725213E-4 0.0 1.8795037608870254E-4 9.397518804435127E-5 11 3.1325062681450426E-5 1.5662531340725213E-4 0.0 2.506005014516034E-4 1.253002507258017E-4 12 3.1325062681450426E-5 1.5662531340725213E-4 0.0 2.506005014516034E-4 1.253002507258017E-4 13 3.1325062681450426E-5 1.5662531340725213E-4 0.0 2.8192556413305384E-4 1.253002507258017E-4 14 3.1325062681450426E-5 1.8795037608870254E-4 0.0 3.1325062681450427E-4 2.506005014516034E-4 15 3.1325062681450426E-5 1.8795037608870254E-4 0.0 3.445756894959547E-4 2.506005014516034E-4 16 3.1325062681450426E-5 1.8795037608870254E-4 0.0 4.698759402217564E-4 2.506005014516034E-4 17 3.1325062681450426E-5 1.8795037608870254E-4 0.0 6.265012536290085E-4 2.506005014516034E-4 18 3.1325062681450426E-5 1.8795037608870254E-4 0.0 6.265012536290085E-4 2.506005014516034E-4 19 3.1325062681450426E-5 1.8795037608870254E-4 0.0 7.831265670362606E-4 2.506005014516034E-4 20 3.1325062681450426E-5 1.8795037608870254E-4 0.0 7.831265670362606E-4 2.506005014516034E-4 21 3.1325062681450426E-5 1.8795037608870254E-4 0.0 9.084268177620623E-4 2.506005014516034E-4 22 3.1325062681450426E-5 1.8795037608870254E-4 0.0 0.0011590273192136657 2.8192556413305384E-4 23 6.265012536290085E-5 1.8795037608870254E-4 0.0 0.0015662531340725212 2.8192556413305384E-4 24 6.265012536290085E-5 2.506005014516034E-4 0.0 0.0025373300771974845 2.8192556413305384E-4 25 6.265012536290085E-5 2.506005014516034E-4 0.0 0.003539732083003898 2.8192556413305384E-4 26 6.265012536290085E-5 2.506005014516034E-4 0.0 0.00667223835114894 2.8192556413305384E-4 27 6.265012536290085E-5 2.506005014516034E-4 0.0 0.015881806779495366 2.8192556413305384E-4 28 6.265012536290085E-5 2.506005014516034E-4 0.0 0.032922640878204394 2.8192556413305384E-4 29 6.265012536290085E-5 2.506005014516034E-4 0.0 0.05578993663566321 2.8192556413305384E-4 30 6.265012536290085E-5 2.8192556413305384E-4 0.0 0.09184508378201264 2.8192556413305384E-4 31 6.265012536290085E-5 2.8192556413305384E-4 0.0 0.17980585979152544 2.8192556413305384E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TATACAC 2580 0.0 25.24031 3 CTTATAC 2690 0.0 23.245354 1 TTATACA 2935 0.0 21.998297 2 GCCGTCT 780 0.0 21.108973 36 TACACAT 3230 0.0 19.931889 5 GGTATCA 6305 0.0 18.455988 1 ATACACA 3715 0.0 18.026918 4 ACACATC 3595 0.0 17.908207 6 ATCTCCG 3540 0.0 17.768362 10 ACATCTC 3710 0.0 17.752022 8 CCGTCTT 985 0.0 16.715734 37 CACATCT 3920 0.0 16.234694 7 TCTCCGA 4100 0.0 15.386586 11 ATCTCGT 3985 0.0 15.273525 37 AGACCGA 4175 0.0 15.021557 25 GAGACCG 4210 0.0 14.98456 24 GATCTCG 4125 0.0 14.9345455 36 GACCGAG 4235 0.0 14.896104 26 TGCCGTC 1095 0.0 14.867579 35 CGAGACC 4245 0.0 14.773851 23 >>END_MODULE