##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2727462.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 4013380 Sequences flagged as poor quality 0 Sequence length 43 %GC 48 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.265199407980305 31.0 31.0 34.0 30.0 34.0 2 31.558273076558912 31.0 31.0 34.0 30.0 34.0 3 31.659857028240534 31.0 31.0 34.0 30.0 34.0 4 35.44665892589289 37.0 35.0 37.0 33.0 37.0 5 35.25545176384992 37.0 35.0 37.0 33.0 37.0 6 35.23548081666824 37.0 35.0 37.0 32.0 37.0 7 35.17286252485436 37.0 35.0 37.0 32.0 37.0 8 35.16286272418759 37.0 35.0 37.0 32.0 37.0 9 36.78441986554974 39.0 37.0 39.0 32.0 39.0 10 36.54937633615556 39.0 35.0 39.0 32.0 39.0 11 36.67924019155924 39.0 35.0 39.0 32.0 39.0 12 36.50264739446551 39.0 35.0 39.0 32.0 39.0 13 36.62662045457943 39.0 35.0 39.0 32.0 39.0 14 37.71778650414364 39.0 37.0 41.0 32.0 41.0 15 37.67286700985205 39.0 36.0 41.0 32.0 41.0 16 37.64290672699819 39.0 36.0 41.0 32.0 41.0 17 37.58807713199348 39.0 36.0 41.0 32.0 41.0 18 37.581933183501185 39.0 36.0 41.0 32.0 41.0 19 37.61220891119206 39.0 36.0 41.0 32.0 41.0 20 37.56559882194061 39.0 36.0 41.0 32.0 41.0 21 37.50918378025505 39.0 36.0 41.0 32.0 41.0 22 37.42414324085932 39.0 36.0 41.0 32.0 41.0 23 37.3521789613742 39.0 36.0 41.0 31.0 41.0 24 37.28841051682123 39.0 36.0 41.0 31.0 41.0 25 37.16403953774624 39.0 36.0 41.0 31.0 41.0 26 36.997705923685274 39.0 36.0 41.0 31.0 41.0 27 36.92671314453154 39.0 36.0 40.0 30.0 41.0 28 36.79963621685462 39.0 36.0 40.0 30.0 41.0 29 36.6703750953062 39.0 35.0 40.0 30.0 41.0 30 36.803984920441124 39.0 35.0 40.0 30.0 41.0 31 36.776328182230436 39.0 35.0 40.0 30.0 41.0 32 36.764566524973965 39.0 35.0 40.0 30.0 41.0 33 36.63791666874305 39.0 35.0 40.0 30.0 41.0 34 36.619849353911164 39.0 35.0 40.0 30.0 41.0 35 36.537698398855824 39.0 35.0 40.0 30.0 41.0 36 36.45482187084203 39.0 35.0 40.0 30.0 41.0 37 36.3894041929745 38.0 35.0 40.0 30.0 41.0 38 36.28900178901574 38.0 35.0 40.0 30.0 41.0 39 36.1750036129148 38.0 35.0 40.0 29.0 41.0 40 36.0533298616129 38.0 35.0 40.0 29.0 41.0 41 35.94095998883734 38.0 35.0 40.0 28.0 41.0 42 35.8370445858603 38.0 34.0 40.0 28.0 41.0 43 35.69618351613852 38.0 34.0 40.0 27.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 13 3.0 14 6.0 15 13.0 16 46.0 17 90.0 18 146.0 19 373.0 20 954.0 21 1944.0 22 3702.0 23 6696.0 24 11249.0 25 18172.0 26 27803.0 27 41067.0 28 58245.0 29 80212.0 30 104943.0 31 134469.0 32 167430.0 33 204945.0 34 253695.0 35 313546.0 36 392333.0 37 506187.0 38 727845.0 39 957266.0 >>END_MODULE >>Per base sequence content warn #Base G A T C 1 41.22091603586005 19.76712895365004 12.637402887341842 26.37455212314807 2 18.609800218269886 21.90916384693201 34.305547942133565 25.175487992664536 3 19.923381289586334 24.083042223761517 30.765763521022183 25.22781296562997 4 14.819105093462367 16.919454424948547 33.787156959968904 34.47428352162018 5 14.354284916952793 37.01040021129322 33.9326203848128 14.702694486941182 6 33.640372952473975 35.12876926680254 16.072138696061675 15.158719084661806 7 27.60996965151568 31.590479844918747 21.19131505115389 19.608235452411684 8 27.48725513158485 33.542051836606554 20.330195496065663 18.640497535742938 9 26.91305084492373 14.020202422895414 19.348952753041075 39.71779397913978 10 17.04797452521316 27.27237390927348 32.79437780623813 22.885273759275222 11 35.60260927198521 21.59862759070908 21.665802889335172 21.13296024797054 12 20.85264789279859 25.72083879423329 29.3862280671155 24.040285245852623 13 30.1806457399997 19.940648530664927 25.4773034200599 24.401402309275475 14 22.447263902246984 21.087711604682337 25.067100548664715 31.397923944405964 15 25.297355346366405 27.776736815352642 22.159999800666768 24.76590803761418 16 25.45761926356338 25.789633675355933 24.54898364969178 24.203763411388906 17 23.415450318684 27.27780573980037 24.854785741694034 24.451958199821597 18 24.365298077929324 24.963522018846955 26.16933856250841 24.50184134071531 19 24.07150581305533 25.564063208567344 26.312509655203343 24.051921323173982 20 23.673063602250473 24.449690784326428 26.568627939542232 25.308617673880867 21 24.487663764707055 24.943588695812508 26.619557579895247 23.949189959585187 22 24.573601303639325 25.298775595632613 26.49881147561407 23.628811625113993 23 24.05947106927328 24.60163253915652 26.298830412270952 25.040065979299243 24 23.949065376316224 25.165546247801107 26.86139862161071 24.02398975427196 25 24.048009408528472 25.47511075452611 26.13709641250019 24.33978342444523 26 24.36793924323139 25.170006328830063 26.407990272538363 24.054064155400187 27 24.43513945851128 25.896476286820587 26.293797248204754 23.37458700646338 28 23.559717744145832 25.176210575624538 26.182843388864246 25.08122829136538 29 23.346481020984804 25.308393423996733 26.944096995549888 24.40102855946858 30 23.734209070658647 25.26705669535404 27.225530600142523 23.77320363384479 31 23.909223646901115 24.925848038311845 26.466793575489987 24.69813473929705 32 24.035027831902287 25.300569594705706 26.730013106159895 23.93438946723211 33 23.249081821307726 24.805101934030667 26.411976937145248 25.53383930751636 34 24.159262267714496 25.47144800641853 27.20280661188325 23.166483113983723 35 23.69678425666147 25.486298332079194 27.280471821756226 23.536445589503113 36 23.48808236449078 25.415036702231035 26.401188026052854 24.69569290722533 37 24.037195580782285 25.553573297320465 26.90906418031684 23.500166941580414 38 23.754964643268266 24.50707383801185 27.16373729873573 24.574224219984153 39 23.940070464296927 25.09959186521087 26.526444044670576 24.433893625821625 40 23.896441403505275 24.351294918497626 28.03674209768325 23.71552158031385 41 23.362676845950297 25.3415574901953 26.86650653563829 24.429259128216117 42 24.157543018602773 24.923082289740815 27.477537636605554 23.441837055050854 43 23.166233947445793 24.364874494814845 27.52744569415306 24.941445863586303 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 1452.0 1 1517.5 2 1583.0 3 2572.0 4 3561.0 5 3561.0 6 4576.5 7 5592.0 8 4880.5 9 4169.0 10 5688.5 11 7208.0 12 7208.0 13 11775.5 14 16343.0 15 22654.0 16 28965.0 17 27852.5 18 26740.0 19 26740.0 20 32284.0 21 37828.0 22 34274.5 23 30721.0 24 36578.5 25 42436.0 26 42436.0 27 50721.5 28 59007.0 29 66674.5 30 74342.0 31 85399.5 32 96457.0 33 96457.0 34 109515.5 35 122574.0 36 138857.5 37 155141.0 38 170814.0 39 186487.0 40 186487.0 41 203719.5 42 220952.0 43 237410.5 44 253869.0 45 274864.5 46 295860.0 47 295860.0 48 318554.0 49 341248.0 50 359818.0 51 378388.0 52 357218.0 53 336048.0 54 336048.0 55 325410.5 56 314773.0 57 291992.5 58 269212.0 59 241100.5 60 212989.0 61 212989.0 62 186051.0 63 159113.0 64 143068.5 65 127024.0 66 106914.0 67 86804.0 68 86804.0 69 68155.0 70 49506.0 71 40572.0 72 31638.0 73 23387.5 74 15137.0 75 15137.0 76 11792.0 77 8447.0 78 6873.5 79 5300.0 80 4182.0 81 3064.0 82 3064.0 83 2351.5 84 1639.0 85 1357.0 86 1075.0 87 720.5 88 366.0 89 366.0 90 281.5 91 197.0 92 130.5 93 64.0 94 58.5 95 53.0 96 53.0 97 29.0 98 5.0 99 4.0 100 3.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 4013380.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 54.18124329355998 #Duplication Level Percentage of deduplicated Percentage of total 1 79.77109009651775 43.22096840311921 2 10.967056165591973 11.884174766441513 3 3.648035010014862 5.929652172631192 4 1.7266320299966391 3.7420428038280504 5 0.9295042349467347 2.5180847548021683 6 0.6316807078573221 2.0535147669759453 7 0.42448799842082807 1.609950126234463 8 0.31300463778669907 1.3567184345547008 9 0.23562727256281105 1.1489920723191271 >10 1.2264978183628172 11.786984801682436 >50 0.07094712857702294 2.647483207951318 >100 0.04690833088361106 4.938566018268466 >500 0.005043777116188666 1.943802375261499 >1k 0.003072118703417828 2.6371834237452925 >5k 2.292625898072999E-4 0.8899425786174889 >10k+ 1.834100718458399E-4 1.6919392935672344 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CTTATACACATCTCCGAGCCCACGAGACCTCTCTACATCTCGT 26787 0.6674424051547574 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 16422 0.40918128858966757 No Hit TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 13690 0.3411089904270216 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 11205 0.27919110575126205 No Hit TCTCCGAGCCCACGAGACCTCTCTACATCTCGTATGCCGTCTT 9099 0.22671663286307303 RNA PCR Primer, Index 39 (95% over 23bp) ATACACATCTCCGAGCCCACGAGACCTCTCTACATCTCGTATG 8676 0.2161768883086077 No Hit ACACATCTCCGAGCCCACGAGACCTCTCTACATCTCGTATGCC 6994 0.17426707662867708 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 5603 0.13960801120252753 No Hit CATCTCCGAGCCCACGAGACCTCTCTACATCTCGTATGCCGTC 5450 0.13579576317218903 RNA PCR Primer, Index 39 (95% over 21bp) >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 2.4916653793062206E-5 0.0 5 0.0 0.0 0.0 4.983330758612441E-5 0.0 6 0.0 0.0 0.0 4.983330758612441E-5 2.4916653793062206E-5 7 0.0 0.0 0.0 7.474996137918663E-5 2.4916653793062206E-5 8 0.0 0.0 0.0 7.474996137918663E-5 4.983330758612441E-5 9 0.0 0.0 0.0 1.7441657655143544E-4 1.2458326896531104E-4 10 0.0 0.0 0.0 1.9933323034449765E-4 1.2458326896531104E-4 11 0.0 0.0 0.0 2.2424988413755986E-4 1.2458326896531104E-4 12 0.0 0.0 0.0 2.491665379306221E-4 1.9933323034449765E-4 13 0.0 0.0 0.0 2.491665379306221E-4 2.2424988413755986E-4 14 0.0 0.0 0.0 2.491665379306221E-4 2.989998455167465E-4 15 0.0 0.0 0.0 2.740831917236843E-4 4.7341642206818194E-4 16 0.0 0.0 0.0 2.989998455167465E-4 5.481663834473686E-4 17 0.0 0.0 0.0 3.488331531028709E-4 5.481663834473686E-4 18 0.0 0.0 0.0 3.488331531028709E-4 6.229163448265552E-4 19 0.0 0.0 0.0 3.488331531028709E-4 6.229163448265552E-4 20 0.0 0.0 0.0 3.737498068959331E-4 6.976663062057417E-4 21 0.0 0.0 0.0 4.4849976827511973E-4 7.474996137918662E-4 22 0.0 0.0 0.0 5.97999691033493E-4 7.474996137918662E-4 23 0.0 0.0 0.0 7.474996137918662E-4 7.973329213779906E-4 24 0.0 2.4916653793062206E-5 0.0 0.0011212494206877992 7.973329213779906E-4 25 0.0 2.4916653793062206E-5 0.0 0.001793999073100479 7.973329213779906E-4 26 0.0 2.4916653793062206E-5 0.0 0.00338866491585646 8.222495751710529E-4 27 0.0 2.4916653793062206E-5 0.0 0.010091244786190194 8.47166228964115E-4 28 0.0 2.4916653793062206E-5 0.0 0.022549571682721297 8.47166228964115E-4 29 0.0 2.4916653793062206E-5 0.0 0.039318479685452164 8.47166228964115E-4 30 0.0 2.4916653793062206E-5 0.0 0.06430988343989355 8.47166228964115E-4 31 0.0 2.4916653793062206E-5 0.0 0.1375399289377034 8.47166228964115E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TATACAC 3910 0.0 28.672634 3 CTTATAC 3980 0.0 27.842964 1 GGTATCA 4135 0.0 26.486095 1 TTATACA 4240 0.0 26.441038 2 TACACAT 4995 0.0 22.888891 5 GCCGTCT 1480 0.0 22.5 36 ATACACA 5200 0.0 21.773077 4 CCGTCTT 1690 0.0 19.704144 37 ACACATC 5965 0.0 19.228834 6 ATCTCCG 6125 0.0 18.515102 10 CACATCT 6340 0.0 18.062302 7 GTATCAA 6600 0.0 16.650002 2 TGCCGTC 2015 0.0 16.526054 35 ATGCCGT 2035 0.0 16.272728 34 TATGCCG 2090 0.0 16.198565 33 TCTCCGA 7280 0.0 15.679259 11 CGAGACC 7245 0.0 15.47412 23 CATCTCC 7455 0.0 15.4600935 9 CACGAGA 7240 0.0 15.4337015 21 CCCACGA 7385 0.0 15.255924 19 >>END_MODULE