##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2727459.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 8622512 Sequences flagged as poor quality 0 Sequence length 43 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.32825468958466 31.0 31.0 34.0 30.0 34.0 2 31.60904397697562 31.0 31.0 34.0 30.0 34.0 3 31.712230960072887 31.0 31.0 34.0 30.0 34.0 4 35.48849581189333 37.0 35.0 37.0 33.0 37.0 5 35.305946341391 37.0 35.0 37.0 33.0 37.0 6 35.29218434256746 37.0 35.0 37.0 32.0 37.0 7 35.227090782825236 37.0 35.0 37.0 32.0 37.0 8 35.204651034408535 37.0 35.0 37.0 32.0 37.0 9 36.83271522266365 39.0 37.0 39.0 32.0 39.0 10 36.61325933788205 39.0 35.0 39.0 32.0 39.0 11 36.733834525252036 39.0 35.0 39.0 32.0 39.0 12 36.56234679638602 39.0 35.0 39.0 32.0 39.0 13 36.66838109358387 39.0 35.0 39.0 32.0 39.0 14 37.77143725633551 40.0 37.0 41.0 32.0 41.0 15 37.731888456635374 40.0 37.0 41.0 32.0 41.0 16 37.69838534292559 39.0 37.0 41.0 32.0 41.0 17 37.649734671288364 39.0 36.0 41.0 32.0 41.0 18 37.63434008558063 39.0 36.0 41.0 32.0 41.0 19 37.64054465798366 39.0 37.0 41.0 32.0 41.0 20 37.595286501195936 39.0 36.0 41.0 32.0 41.0 21 37.54411475449382 39.0 36.0 41.0 32.0 41.0 22 37.45346889630307 39.0 36.0 41.0 32.0 41.0 23 37.36557119317433 39.0 36.0 41.0 31.0 41.0 24 37.280123936040916 39.0 36.0 41.0 31.0 41.0 25 37.18314883180215 39.0 36.0 41.0 31.0 41.0 26 37.000150768128826 39.0 36.0 41.0 31.0 41.0 27 36.91633563397766 39.0 36.0 40.0 30.0 41.0 28 36.74289928503434 39.0 36.0 40.0 30.0 41.0 29 36.618050980967034 39.0 35.0 40.0 30.0 41.0 30 36.738672906456955 39.0 35.0 40.0 30.0 41.0 31 36.74654914948219 39.0 35.0 40.0 30.0 41.0 32 36.73144264687599 39.0 35.0 40.0 30.0 41.0 33 36.60476239406799 39.0 35.0 40.0 30.0 41.0 34 36.58302835646967 39.0 35.0 40.0 30.0 41.0 35 36.469097056635 39.0 35.0 40.0 30.0 41.0 36 36.39802890387395 39.0 35.0 40.0 30.0 41.0 37 36.3256699439792 38.0 35.0 40.0 30.0 41.0 38 36.19509940954562 38.0 35.0 40.0 29.0 41.0 39 36.07109923419068 38.0 35.0 40.0 29.0 41.0 40 35.95385219527674 38.0 35.0 40.0 28.0 41.0 41 35.81217492071916 38.0 34.0 40.0 28.0 41.0 42 35.671378016058426 38.0 34.0 40.0 27.0 41.0 43 35.5220809202701 38.0 34.0 40.0 27.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 11 2.0 12 4.0 13 11.0 14 20.0 15 71.0 16 190.0 17 367.0 18 623.0 19 1214.0 20 2452.0 21 4946.0 22 8995.0 23 15768.0 24 25882.0 25 40706.0 26 60852.0 27 88905.0 28 125168.0 29 170508.0 30 224122.0 31 285380.0 32 354064.0 33 435248.0 34 542098.0 35 670461.0 36 842950.0 37 1091346.0 38 1586263.0 39 2043896.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 42.43370145498203 19.44579491452143 12.260580211427946 25.859923419068597 2 19.06835270278545 21.94740929325468 33.55910667332211 25.42513133063775 3 20.29039797219186 24.257640928768787 29.74816387614189 25.703797222897457 4 14.615740749331518 16.192230292054102 34.418450214972154 34.773578743642226 5 14.365917959870627 37.6391937755494 33.41705990087343 14.577828363706539 6 34.08562377181963 34.99042970308421 16.254149602807164 14.669796922289002 7 28.488507757368154 31.720698098187626 21.161373854858073 18.629420289586143 8 28.22951130714576 32.66657094823411 20.256556326045125 18.847361418575005 9 27.826867622799483 13.880201036542484 19.304246836652705 38.98868450400533 10 17.626626672134524 26.277562733458648 32.060483070362785 24.035327524044035 11 36.73964153369691 21.649793006956674 20.866204651266358 20.74436080808006 12 21.484632320604483 25.757621444887523 28.93973357184078 23.81801266266721 13 30.061923949772414 19.49925961251199 25.512901576709897 24.9259148610057 14 22.869089657399144 20.973864692794862 24.643676923847714 31.51336872595828 15 25.983414114123587 27.73035282525556 21.784069421996747 24.502163638624104 16 25.74077020710438 25.46763634541767 24.399710896314204 24.391882551163743 17 24.403027795148326 26.23378198835792 24.402099991278643 24.96109022521511 18 24.907660319869663 24.13947350841611 26.122375938705567 24.830490233008664 19 24.802145824789807 25.355325686992376 25.62671991642343 24.21580857179439 20 24.466257628867318 23.924025852327024 25.846516653151657 25.763199865654002 21 25.75103403741276 24.883630199644838 25.986371488958206 23.37896427398419 22 25.61896115656319 24.226965413327346 25.753249169151637 24.400824260957826 23 24.432647933688003 24.223231002751866 26.151288626794607 25.192832436765528 24 23.93482316986048 25.115221643066427 26.22270632966356 24.727248857409535 25 24.822186388374988 24.57994839554877 25.463391642713862 25.13447357336238 26 24.56916267556369 25.55613723703719 25.895968599405833 23.97873148799329 27 26.03182228102437 24.644303191459752 25.30104916061584 24.02282536690004 28 24.288281651565114 25.09282677716192 25.871880491439153 24.74701107983381 29 24.257200221930685 25.072241128803302 26.351508701872493 24.31904994739352 30 24.21744382611471 25.420318348063763 26.347751096200273 24.01448672962125 31 24.916288895857726 25.226558107428552 25.511312712583063 24.345840284130656 32 24.870977274372017 24.879675435650306 25.06808920648646 25.181258083491215 33 23.800245218562758 24.61436991911406 25.778682592729357 25.806702269593828 34 25.432739322369162 24.880000167004695 25.98001603245087 23.70724447817527 35 25.021316293905997 24.44832781908567 26.609090251193617 23.921265635814713 36 23.887713928377252 25.759894564368246 25.87116144344015 24.481230063814348 37 25.17244394672921 25.01703679855708 26.024898544646852 23.78562071006686 38 24.3104445665022 24.262175570181867 26.224724303080123 25.202655560235808 39 24.90928397664161 24.676439997995946 25.687537460081238 24.72673856528121 40 24.941490368468028 24.30565477902495 26.459957376690223 24.29289747581679 41 23.66262870959182 25.62816960996981 26.4847297400108 24.22447194042757 42 25.17308181188962 24.98480721163392 26.52795380278972 23.314157173686738 43 24.01301384097813 23.953912734479232 26.308203456254976 25.72486996828766 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 1503.0 1 1743.0 2 1983.0 3 3908.5 4 5834.0 5 5834.0 6 7727.5 7 9621.0 8 8192.5 9 6764.0 10 9511.5 11 12259.0 12 12259.0 13 20476.5 14 28694.0 15 38890.5 16 49087.0 17 47212.5 18 45338.0 19 45338.0 20 55252.0 21 65166.0 22 60247.5 23 55329.0 24 66522.5 25 77716.0 26 77716.0 27 94179.0 28 110642.0 29 125958.0 30 141274.0 31 162431.0 32 183588.0 33 183588.0 34 214078.5 35 244569.0 36 284758.0 37 324947.0 38 361764.0 39 398581.0 40 398581.0 41 439441.0 42 480301.0 43 506555.5 44 532810.0 45 583112.5 46 633415.0 47 633415.0 48 698718.5 49 764022.0 50 768486.0 51 772950.0 52 752431.5 53 731913.0 54 731913.0 55 694779.5 56 657646.0 57 621624.5 58 585603.0 59 537941.5 60 490280.0 61 490280.0 62 425417.0 63 360554.0 64 335854.0 65 311154.0 66 269155.0 67 227156.0 68 227156.0 69 177277.5 70 127399.0 71 109066.0 72 90733.0 73 63188.5 74 35644.0 75 35644.0 76 27668.0 77 19692.0 78 17275.0 79 14858.0 80 12033.0 81 9208.0 82 9208.0 83 7834.0 84 6460.0 85 5620.5 86 4781.0 87 3179.0 88 1577.0 89 1577.0 90 1170.5 91 764.0 92 536.5 93 309.0 94 332.5 95 356.0 96 356.0 97 186.5 98 17.0 99 16.0 100 15.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 8622512.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 41.57454219763642 #Duplication Level Percentage of deduplicated Percentage of total 1 79.0123363762927 32.849017128100236 2 11.030493700320768 9.17175451609497 3 3.6256481952617126 4.522039916630772 4 1.6956113720539772 2.8197706615300104 5 0.9955169054590334 2.0694079797233504 6 0.6695448716718354 1.6701612912319073 7 0.46221994356752194 1.3451607783905946 8 0.3541078332190568 1.177749684374342 9 0.27707090968456227 1.036718660377651 >10 1.6265457432110224 12.72277559453211 >50 0.13339073517179903 3.8208089884367946 >100 0.09298835543329036 7.771685556088601 >500 0.011008708269519989 3.249449889369771 >1k 0.011899962097914768 10.084597550812669 >5k 0.0011983568323163194 3.2709314185557545 >10k+ 4.1803145313359973E-4 2.4179703857505492 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 25737 0.298486102425836 No Hit TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 22191 0.25736119590207585 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 19044 0.2208637111783666 No Hit GGGTAGGCACACGCTGAGCCAGTCAGTGTAGCGCGCGTGCAGC 16855 0.19547667779412775 No Hit GTGTAGCGCGCGTGCAGCCCCGGACATCTAAGGGCATCACAGA 14905 0.172861458470571 No Hit GTACATGGGGAATAATTGCAATCCCCGATCCCCATCACGAATG 14566 0.16892988957278343 No Hit CTTATACACATCTCCGAGCCCACGAGACGTAGAGGAATCTCGT 11539 0.13382411065360073 No Hit CCTTAGATGTCCGGGGCTGCACGCGCGCTACACTGACTGGCTC 11381 0.13199169801097407 No Hit GGATTGACAGATTGATAGCTCTTTCTCGATTCCGTGGGTGGTG 11124 0.12901112807961299 No Hit GTGCATGGCCGTTCTTAGTTGGTGGAGCGATTTGTCTGGTTAA 10432 0.1209856246068431 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 10395 0.12055651531711409 No Hit GCCATGCACCACCACCCACGGAATCGAGAAAGAGCTATCAATC 10187 0.1181442252559347 No Hit GCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAATGTTTT 10120 0.11736718951507402 No Hit CATCTAAGGGCATCACAGACCTGTTATTGCTCAATCTCGGGTG 10114 0.1172976042248477 No Hit AGTCAGTGTAGCGCGCGTGCAGCCCCGGACATCTAAGGGCATC 10102 0.11715843364439504 No Hit GCGCTACACTGACTGGCTCAGCGTGTGCCTACCCTACGCCGGC 9738 0.1129369260373311 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 1.1597548371054746E-5 2 0.0 0.0 0.0 1.1597548371054746E-5 1.1597548371054746E-5 3 0.0 0.0 0.0 1.1597548371054746E-5 1.1597548371054746E-5 4 0.0 0.0 0.0 4.6390193484218984E-5 3.479264511316424E-5 5 0.0 0.0 0.0 9.278038696843797E-5 3.479264511316424E-5 6 0.0 0.0 0.0 9.278038696843797E-5 4.6390193484218984E-5 7 0.0 0.0 0.0 9.278038696843797E-5 4.6390193484218984E-5 8 0.0 0.0 0.0 9.278038696843797E-5 6.958529022632848E-5 9 0.0 0.0 0.0 1.275730320816022E-4 8.118283859738322E-5 10 0.0 0.0 0.0 1.3917058045265695E-4 9.278038696843797E-5 11 0.0 0.0 0.0 1.507681288237117E-4 1.0437793533949271E-4 12 0.0 0.0 0.0 1.739632255658212E-4 1.0437793533949271E-4 13 0.0 0.0 0.0 1.739632255658212E-4 1.0437793533949271E-4 14 0.0 0.0 0.0 1.9715832230793068E-4 1.1597548371054746E-4 15 0.0 0.0 0.0 2.2035341905004017E-4 1.1597548371054746E-4 16 0.0 0.0 0.0 2.783411609053139E-4 1.275730320816022E-4 17 0.0 0.0 0.0 3.479264511316424E-4 1.3917058045265695E-4 18 0.0 0.0 0.0 4.059141929869161E-4 1.507681288237117E-4 19 0.0 0.0 0.0 4.291092897290256E-4 1.507681288237117E-4 20 0.0 0.0 0.0 5.218896766974636E-4 1.507681288237117E-4 21 0.0 2.3195096742109492E-5 0.0 6.494627087790658E-4 1.507681288237117E-4 22 0.0 2.3195096742109492E-5 0.0 9.046087729422702E-4 1.507681288237117E-4 23 0.0 2.3195096742109492E-5 0.0 0.0010901695468791461 1.739632255658212E-4 24 0.0 2.3195096742109492E-5 0.0 0.0014960837398660621 1.739632255658212E-4 25 0.0 2.3195096742109492E-5 0.0 0.0019251930295950878 1.739632255658212E-4 26 0.0 2.3195096742109492E-5 0.0 0.0033053012857506025 1.8556077393687594E-4 27 0.0 2.3195096742109492E-5 0.0 0.007376040763990818 1.9715832230793068E-4 28 0.0 2.3195096742109492E-5 0.0 0.0174775053951795 1.9715832230793068E-4 29 0.0 2.3195096742109492E-5 0.0 0.032415147697098017 1.9715832230793068E-4 30 0.0 2.3195096742109492E-5 0.0 0.05718751101767095 1.9715832230793068E-4 31 0.0 2.3195096742109492E-5 0.0 0.1258797900194282 1.9715832230793068E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TATACAC 3090 0.0 19.5178 3 ATCTCCG 2950 0.0 18.688135 10 GGTATCA 13270 0.0 17.858704 1 GACGTAG 3105 0.0 17.695654 26 TACACAT 3585 0.0 17.02929 5 ACGTAGA 3280 0.0 16.977133 27 CGAGACG 3340 0.0 16.838324 23 AGACGTA 3385 0.0 16.614475 25 TTATACA 3530 0.0 16.403683 2 CCCACGA 3375 0.0 16.38963 19 AAGACGG 2550 0.0 16.033333 5 CTTATAC 3490 0.0 16.008596 1 GAGACGT 3480 0.0 16.001438 24 ACACATC 3730 0.0 15.772118 6 CGTAGAG 3495 0.0 15.72103 28 CACGAGA 3520 0.0 15.661932 21 CCACGAG 3570 0.0 15.494398 20 TCTCCGA 3600 0.0 15.468056 11 CAAGACG 2625 0.0 15.434285 4 CGAGCCC 3690 0.0 15.241193 15 >>END_MODULE