##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2727458.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 5859615 Sequences flagged as poor quality 0 Sequence length 43 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.33899257886397 31.0 31.0 34.0 30.0 34.0 2 31.62066927605312 31.0 31.0 34.0 30.0 34.0 3 31.730657218946977 31.0 31.0 34.0 30.0 34.0 4 35.501323380461 37.0 35.0 37.0 33.0 37.0 5 35.30847367958475 37.0 35.0 37.0 33.0 37.0 6 35.300770443109315 37.0 35.0 37.0 32.0 37.0 7 35.23129096365546 37.0 35.0 37.0 32.0 37.0 8 35.203472071117304 37.0 35.0 37.0 32.0 37.0 9 36.844011253299065 39.0 37.0 39.0 33.0 39.0 10 36.62457465208892 39.0 35.0 39.0 32.0 39.0 11 36.73273346457062 39.0 35.0 39.0 32.0 39.0 12 36.56658108083893 39.0 35.0 39.0 32.0 39.0 13 36.66543996491237 39.0 35.0 39.0 32.0 39.0 14 37.78296219120198 40.0 37.0 41.0 32.0 41.0 15 37.73980167639 40.0 37.0 41.0 32.0 41.0 16 37.71126857310591 40.0 37.0 41.0 32.0 41.0 17 37.61024504169642 39.0 36.0 41.0 32.0 41.0 18 37.61412072294852 39.0 36.0 41.0 32.0 41.0 19 37.615165160168374 39.0 37.0 41.0 32.0 41.0 20 37.57407833108489 39.0 36.0 41.0 32.0 41.0 21 37.52013707385212 39.0 36.0 41.0 32.0 41.0 22 37.43703741628076 39.0 36.0 41.0 32.0 41.0 23 37.3109687240544 39.0 36.0 41.0 31.0 41.0 24 37.2458383357951 39.0 36.0 41.0 31.0 41.0 25 37.16059092619566 39.0 36.0 41.0 31.0 41.0 26 36.967524316870644 39.0 36.0 41.0 31.0 41.0 27 36.892515122580576 39.0 36.0 40.0 30.0 41.0 28 36.735011088612474 39.0 36.0 40.0 30.0 41.0 29 36.61205574086352 39.0 35.0 40.0 30.0 41.0 30 36.737963501014995 39.0 35.0 40.0 30.0 41.0 31 36.7487159139295 39.0 35.0 40.0 30.0 41.0 32 36.73769385872621 39.0 35.0 40.0 30.0 41.0 33 36.62213182948027 39.0 35.0 40.0 30.0 41.0 34 36.59446277613802 39.0 35.0 40.0 30.0 41.0 35 36.49200365553027 39.0 35.0 40.0 30.0 41.0 36 36.42642545627998 39.0 35.0 40.0 30.0 41.0 37 36.35184700701326 38.0 35.0 40.0 30.0 41.0 38 36.22606553502235 38.0 35.0 40.0 29.0 41.0 39 36.11060897345645 38.0 35.0 40.0 29.0 41.0 40 35.987617275196406 38.0 35.0 40.0 28.0 41.0 41 35.84967664257805 38.0 34.0 40.0 28.0 41.0 42 35.71581426424773 38.0 34.0 40.0 27.0 41.0 43 35.55421900585619 38.0 34.0 40.0 27.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 12 4.0 13 6.0 14 13.0 15 42.0 16 129.0 17 275.0 18 459.0 19 873.0 20 1736.0 21 3542.0 22 6234.0 23 10988.0 24 17962.0 25 27977.0 26 42112.0 27 60730.0 28 85645.0 29 115835.0 30 151315.0 31 193679.0 32 239644.0 33 295881.0 34 366905.0 35 452322.0 36 569575.0 37 737963.0 38 1075595.0 39 1402174.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 42.371845249218595 19.418852603797347 11.93807101661116 26.2712311303729 2 19.13774198475497 21.75356230742122 33.111288028309026 25.99740767951478 3 20.5267922892545 23.74365892639704 29.312181773034578 26.417367011313885 4 14.677858528248017 16.19097841752402 34.088946116767055 35.04221693746091 5 14.832663920752474 36.6640811725685 33.51453977778404 14.988715128894986 6 34.66038297737991 34.897139146513894 15.837473963733112 14.605003912373082 7 28.88317747838382 30.773267526962094 21.15657769324435 19.186977301409737 8 28.181459020771843 32.47774811143736 19.94013258550263 19.40066028228817 9 27.171102538306695 13.800514197605132 19.180526365640063 39.84785689844811 10 17.511355268221546 26.231126106408016 32.187746123252126 24.069772502118315 11 37.0794497590712 21.355908195333654 20.772644619143065 20.79199742645208 12 21.771225583933415 25.586612772340843 28.838720632669553 23.803441011056186 13 30.533832000907907 19.25152079104173 24.92109123210313 25.293555975947225 14 23.043988384902423 20.70625800500545 24.228912650404506 32.020840959687625 15 25.83953041283429 27.363418927694056 21.50880219946191 25.288248460009743 16 26.031317757224663 25.369124080677658 23.83914301536876 24.760415146728924 17 24.668190657577334 26.155626265548165 24.318252991024153 24.85793008585035 18 25.383391229628565 23.805966774267592 25.798025979522542 25.012616016581298 19 24.96065014510339 25.270277996079948 25.128442738985413 24.64062911983125 20 24.962339675900207 24.105918221589643 25.277343306684823 25.654398795825323 21 26.02319435662582 24.681604508146012 25.07043551496131 24.22476562026686 22 25.680117209065784 24.538915952669246 25.221315734907495 24.559651103357474 23 24.7380757950821 24.070216217277075 25.515379423392154 25.676328564248674 24 24.557091208210778 25.36876569535712 25.376940293858897 24.697202802573205 25 25.146344939044628 24.682167685078284 24.82985656907493 25.34163080680215 26 25.13499607056095 25.52450971608203 25.145730564209423 24.194763649147596 27 26.00300531690222 24.486113848776757 24.842075801908486 24.66880503241254 28 24.8816176489411 24.604636994068724 25.74399512595964 24.76975023103054 29 24.442356707735918 24.9544210669131 25.677215994566193 24.926006230784786 30 24.057331411705377 25.63740109205127 25.927505476042366 24.377762020200986 31 25.375933401767863 25.029750248096505 24.614859508687857 24.979456841447774 32 24.773419414074134 24.944454541808632 24.63465603115563 25.647470012961605 33 24.387489621758426 24.600626491672234 25.325469335442683 25.686414551126653 34 25.560757831359226 24.737034771055775 25.227340021486057 24.474867376098942 35 25.196587147790428 24.547363606653338 26.002851723193416 24.253197522362818 36 24.264307467299474 25.615556653466143 25.196365290211048 24.923770589023338 37 25.37345883645939 24.904332451876105 25.27198459284441 24.450224118820092 38 24.33647944446862 24.480191958004067 25.885011216607236 25.298317380920075 39 25.363543509257862 24.364314037697017 24.989338036714017 25.282804416331107 40 24.975804724371823 24.578423667766568 25.934895040032497 24.510876567829115 41 24.185582158554787 25.19592157505229 25.923017126551827 24.695479139841098 42 25.53512474795699 24.83449851227427 25.997185821935396 23.63319091783334 43 24.619416122048975 23.801632018485854 25.935628876641214 25.643322982823957 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 349.0 1 409.5 2 470.0 3 1187.0 4 1904.0 5 1904.0 6 2706.0 7 3508.0 8 3245.0 9 2982.0 10 4115.5 11 5249.0 12 5249.0 13 9115.5 14 12982.0 15 19570.5 16 26159.0 17 26042.0 18 25925.0 19 25925.0 20 31446.5 21 36968.0 22 36271.5 23 35575.0 24 44116.5 25 52658.0 26 52658.0 27 63251.5 28 73845.0 29 84064.5 30 94284.0 31 108794.0 32 123304.0 33 123304.0 34 143757.5 35 164211.0 36 190920.5 37 217630.0 38 243557.5 39 269485.0 40 269485.0 41 295752.0 42 322019.0 43 338442.5 44 354866.0 45 386648.0 46 418430.0 47 418430.0 48 460682.0 49 502934.0 50 507704.5 51 512475.0 52 494025.5 53 475576.0 54 475576.0 55 462595.5 56 449615.0 57 433430.0 58 417245.0 59 389368.0 60 361491.0 61 361491.0 62 314177.0 63 266863.0 64 245792.5 65 224722.0 66 193883.0 67 163044.0 68 163044.0 69 129437.0 70 95830.0 71 81774.5 72 67719.0 73 48877.0 74 30035.0 75 30035.0 76 23662.5 77 17290.0 78 15070.0 79 12850.0 80 10247.0 81 7644.0 82 7644.0 83 6430.0 84 5216.0 85 4527.0 86 3838.0 87 2540.5 88 1243.0 89 1243.0 90 923.5 91 604.0 92 442.0 93 280.0 94 272.5 95 265.0 96 265.0 97 140.0 98 15.0 99 16.5 100 18.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 5859615.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 50.236387465254786 #Duplication Level Percentage of deduplicated Percentage of total 1 81.70319368464199 41.044732950904326 2 10.256136876455752 10.30462532044638 3 3.1863854510383045 4.802174823960327 4 1.4721697234445708 2.958259545663137 5 0.8334831214714159 2.0935590517994034 6 0.5387072722826126 1.62376243564439 7 0.35615621196338415 1.2524401023644982 8 0.26661916521709594 1.0715186951607047 9 0.19165523312820515 0.8665259896055023 >10 1.046143270085539 9.306088107974121 >50 0.06997351067359218 2.432515070568751 >100 0.05805017508554069 6.043500797874458 >500 0.01039235000753857 3.673870031669508 >1k 0.01029078071016866 10.177930318719163 >5k 5.754712897099559E-4 1.945547968915307 >10k+ 6.770250467175953E-5 0.40294878873003337 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 12577 0.21463867506653594 No Hit TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 11118 0.18973942827301793 No Hit GGGTAGGCACACGCTGAGCCAGTCAGTGTAGCGCGCGTGCAGC 9804 0.16731474678797156 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 9161 0.1563413295924732 No Hit GTGTAGCGCGCGTGCAGCCCCGGACATCTAAGGGCATCACAGA 8669 0.1479448735113143 No Hit CTTATACACATCTCCGAGCCCACGAGACAAGAGGCAATCTCGT 8455 0.14429275643536307 No Hit GTACATGGGGAATAATTGCAATCCCCGATCCCCATCACGAATG 7300 0.12458156380581319 No Hit GCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAATGTTTT 7188 0.12267017542961439 No Hit CCTTAGATGTCCGGGGCTGCACGCGCGCTACACTGACTGGCTC 6582 0.11232819903696743 No Hit GGATTGACAGATTGATAGCTCTTTCTCGATTCCGTGGGTGGTG 6467 0.11036561275783478 No Hit CATCTAAGGGCATCACAGACCTGTTATTGCTCAATCTCGGGTG 6068 0.10355629166762662 No Hit GCCATGCACCACCACCCACGGAATCGAGAAAGAGCTATCAATC 6020 0.10273712522068429 No Hit AGTCAGTGTAGCGCGCGTGCAGCCCCGGACATCTAAGGGCATC 5976 0.1019862226443205 No Hit GTGCATGGCCGTTCTTAGTTGGTGGAGCGATTTGTCTGGTTAA 5904 0.100757472973907 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 3.4131935289263886E-5 0.0 5 0.0 0.0 0.0 6.826387057852777E-5 0.0 6 0.0 0.0 0.0 8.532983822315972E-5 0.0 7 0.0 0.0 0.0 8.532983822315972E-5 0.0 8 0.0 0.0 0.0 8.532983822315972E-5 0.0 9 0.0 0.0 0.0 1.0239580586779166E-4 1.7065967644631943E-5 10 0.0 0.0 0.0 1.194617735124236E-4 1.7065967644631943E-5 11 0.0 0.0 0.0 1.3652774115705554E-4 5.119790293389583E-5 12 0.0 0.0 0.0 1.5359370880168747E-4 5.119790293389583E-5 13 0.0 0.0 0.0 1.5359370880168747E-4 5.119790293389583E-5 14 0.0 0.0 0.0 1.5359370880168747E-4 6.826387057852777E-5 15 0.0 0.0 0.0 1.7065967644631943E-4 8.532983822315972E-5 16 1.7065967644631943E-5 0.0 0.0 2.0479161173558332E-4 8.532983822315972E-5 17 1.7065967644631943E-5 0.0 0.0 2.389235470248472E-4 8.532983822315972E-5 18 1.7065967644631943E-5 0.0 0.0 2.730554823141111E-4 1.0239580586779166E-4 19 1.7065967644631943E-5 0.0 0.0 3.4131935289263886E-4 1.0239580586779166E-4 20 1.7065967644631943E-5 0.0 0.0 3.754512881819027E-4 1.0239580586779166E-4 21 1.7065967644631943E-5 0.0 0.0 4.437151587604305E-4 1.194617735124236E-4 22 1.7065967644631943E-5 1.7065967644631943E-5 0.0 4.949130616943263E-4 1.194617735124236E-4 23 1.7065967644631943E-5 1.7065967644631943E-5 0.0 7.338366087191736E-4 1.194617735124236E-4 24 1.7065967644631943E-5 1.7065967644631943E-5 0.0 0.0010580899939671804 1.194617735124236E-4 25 1.7065967644631943E-5 1.7065967644631943E-5 0.0 0.0013482114439259236 1.194617735124236E-4 26 1.7065967644631943E-5 1.7065967644631943E-5 0.0 0.0022356417614467845 1.3652774115705554E-4 27 1.7065967644631943E-5 1.7065967644631943E-5 0.0 0.004573679328761361 1.3652774115705554E-4 28 1.7065967644631943E-5 1.7065967644631943E-5 0.0 0.011843781545374568 1.3652774115705554E-4 29 1.7065967644631943E-5 1.7065967644631943E-5 0.0 0.02196390035864131 1.5359370880168747E-4 30 1.7065967644631943E-5 1.7065967644631943E-5 0.0 0.03795471204166144 1.5359370880168747E-4 31 1.7065967644631943E-5 1.7065967644631943E-5 0.0 0.08364030742634115 1.5359370880168747E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TATACAC 2015 0.0 19.831266 3 ATCTCCG 2095 0.0 16.954653 10 CTTATAC 2080 0.0 16.899038 1 TTATACA 2325 0.0 16.152687 2 TACACAT 2475 0.0 16.070707 5 CAAGACG 1940 0.0 15.925258 4 AAGACGG 1980 0.0 15.790404 5 TCTCCGA 2405 0.0 15.076923 11 ACACATC 2475 0.0 14.949494 6 ATCTCGT 2340 0.0 14.942308 37 CGCAATA 1365 0.0 14.772895 36 CGAGACA 2455 0.0 14.769857 23 CGCAAGA 2070 0.0 14.746377 2 TCTAGCG 1420 0.0 14.72183 28 ATACACA 2855 0.0 14.32049 4 CTAGCGG 1450 0.0 14.289657 29 TCGTTTA 1355 0.0 14.199262 30 CACGAGA 2515 0.0 14.196818 21 ACGGACC 2190 0.0 14.19178 8 GGCAATC 2555 0.0 14.046967 33 >>END_MODULE