##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2727457.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 4758847 Sequences flagged as poor quality 0 Sequence length 43 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.348009297210016 31.0 31.0 34.0 30.0 34.0 2 31.64376917349938 31.0 31.0 34.0 30.0 34.0 3 31.75545967332003 31.0 31.0 34.0 30.0 34.0 4 35.52173394101555 37.0 35.0 37.0 33.0 37.0 5 35.32489361393632 37.0 35.0 37.0 33.0 37.0 6 35.307775181677414 37.0 35.0 37.0 32.0 37.0 7 35.23759137454934 37.0 35.0 37.0 32.0 37.0 8 35.21426702728623 37.0 35.0 37.0 32.0 37.0 9 36.85921863005892 39.0 37.0 39.0 33.0 39.0 10 36.63321766806119 39.0 35.0 39.0 32.0 39.0 11 36.74930019813623 39.0 35.0 39.0 32.0 39.0 12 36.57499978461169 39.0 35.0 39.0 32.0 39.0 13 36.68086072109484 39.0 35.0 39.0 32.0 39.0 14 37.80899259841722 40.0 37.0 41.0 32.0 41.0 15 37.76266562047488 40.0 37.0 41.0 32.0 41.0 16 37.743429658486605 40.0 37.0 41.0 32.0 41.0 17 37.67291867126638 40.0 37.0 41.0 32.0 41.0 18 37.64665453627738 39.0 36.0 41.0 32.0 41.0 19 37.64362922363337 39.0 37.0 41.0 32.0 41.0 20 37.599841936502685 39.0 37.0 41.0 32.0 41.0 21 37.536964310892955 39.0 36.0 41.0 32.0 41.0 22 37.448003266337416 39.0 36.0 41.0 32.0 41.0 23 37.36524960773061 39.0 36.0 41.0 31.0 41.0 24 37.27793307916813 39.0 36.0 41.0 31.0 41.0 25 37.18397712723271 39.0 36.0 41.0 31.0 41.0 26 36.98984670026164 39.0 36.0 41.0 31.0 41.0 27 36.92049187544798 39.0 36.0 40.0 30.0 41.0 28 36.76968244618917 39.0 36.0 40.0 30.0 41.0 29 36.63368731963856 39.0 35.0 40.0 30.0 41.0 30 36.781353970825286 39.0 36.0 40.0 30.0 41.0 31 36.78811064949136 39.0 36.0 40.0 30.0 41.0 32 36.784739454746074 39.0 35.0 41.0 30.0 41.0 33 36.67461551085799 39.0 35.0 41.0 30.0 41.0 34 36.642736150164104 39.0 35.0 40.0 30.0 41.0 35 36.555708977405665 39.0 35.0 40.0 30.0 41.0 36 36.47912719194376 39.0 35.0 40.0 30.0 41.0 37 36.40089437630586 39.0 35.0 40.0 30.0 41.0 38 36.28088400404552 38.0 35.0 40.0 29.0 41.0 39 36.17465827331704 38.0 35.0 40.0 29.0 41.0 40 36.061206632615004 38.0 35.0 40.0 29.0 41.0 41 35.93427504603531 38.0 35.0 40.0 28.0 41.0 42 35.80277806788073 38.0 34.0 40.0 28.0 41.0 43 35.6542986147695 38.0 34.0 40.0 27.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 11 1.0 12 3.0 13 2.0 14 7.0 15 20.0 16 99.0 17 193.0 18 302.0 19 575.0 20 1271.0 21 2553.0 22 4875.0 23 8629.0 24 14286.0 25 22362.0 26 33581.0 27 48830.0 28 68797.0 29 93162.0 30 122854.0 31 155397.0 32 193454.0 33 237213.0 34 293339.0 35 363727.0 36 456451.0 37 593742.0 38 879166.0 39 1163956.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 42.415316146957444 19.142094713278237 11.842196229464825 26.60039291029949 2 19.032152115838144 21.35603435033738 33.38550283293411 26.226310700890366 3 20.265791272549844 23.42958283802778 29.612698201896382 26.69192768752599 4 14.782824495093033 16.05714577501651 33.84380712386845 35.31622260602201 5 14.86093165004044 36.44866077854573 33.7765849584994 14.913822612914432 6 34.97601414796483 34.702313396501296 15.63462746333303 14.687044992200843 7 29.10868956282898 30.501947215365405 21.043647757534544 19.34571546427107 8 28.053307870582938 32.79466643916058 19.852834100360862 19.29919158989562 9 27.00534394150516 13.88294265396639 18.895270219866283 40.21644318466217 10 17.341196302381647 26.26573201449847 32.46349378326305 23.929577899856834 11 36.92499464681256 21.1905110628688 20.968734653583105 20.915759636735537 12 21.65846054727122 25.148087341324484 29.077925808499412 24.115526302904886 13 30.519136252962113 19.22585449794877 24.925743567717138 25.329265681371982 14 22.970269899410507 20.392040340864078 24.128008317981227 32.509681441744185 15 25.68464588165999 27.245233982096924 21.45370506763508 25.616415068608006 16 26.22677299774504 25.19526263399517 23.648039115357143 24.929925252902645 17 24.634055265907897 26.2127569976509 24.276741824227592 24.87644591221361 18 25.48873708274294 24.052401768747767 25.437947469208407 25.02091367930089 19 25.050710812934305 25.056510537111194 25.058548845970464 24.83422980398403 20 24.898215891370327 24.079824377627606 25.19379168945755 25.82816804154452 21 25.7914574685843 24.567736680754813 25.144641128407784 24.4961647222531 22 25.57537571600852 24.64067451632717 25.124867431123548 24.659082336540763 23 24.845472022950098 24.110714212917543 25.311173063559306 25.73264070057306 24 24.977163586053514 25.112049200152892 25.128292630546856 24.782494583246738 25 25.214090724076648 24.65078200664993 24.7612079144381 25.373919354835323 26 25.48816971842129 25.088430033577463 25.08540409052865 24.337996157472595 27 25.84386512111022 24.66939996179747 24.678982114785367 24.807752802306947 28 24.898215891370327 24.521191792885965 25.51935374261875 25.06123857312496 29 25.005741937070052 24.678792993344818 25.439964764574274 24.875500305010856 30 24.224145050261125 25.19969648110141 25.57688868753293 24.99926978110454 31 25.22762341382272 24.723278558861 25.16002300557257 24.88907502174371 32 24.785079242934266 25.01538713053813 24.665995775867557 25.533537850660043 33 24.38494030171594 24.48244291106648 25.286713357248093 25.845903429969486 34 25.72984590595159 24.629831553735603 25.067794783064052 24.572527757248764 35 25.105156774319493 24.457499894407196 25.81278616437973 24.624557166893577 36 24.479101765616758 25.20026384542306 25.372973747632564 24.947660641327616 37 25.392369202035702 24.848855195386612 25.273769045317067 24.485006557260615 38 24.533337592067994 24.384919288222545 25.781602140182276 25.300140979527185 39 25.29633753722278 24.36840268241446 24.865939165516355 25.469320614846414 40 24.947933816741745 24.455020302186643 26.007350099719535 24.58969578135208 41 24.360438568417937 25.059494453173215 25.68017000756696 24.899896970841887 42 25.547784999181523 24.757467512613875 25.76397181922428 23.930775668980324 43 24.718025185512374 23.85134466394906 25.825163111989102 25.605467038549463 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 280.0 1 370.0 2 460.0 3 1005.5 4 1551.0 5 1551.0 6 2114.0 7 2677.0 8 2413.0 9 2149.0 10 2958.0 11 3767.0 12 3767.0 13 6616.5 14 9466.0 15 13854.0 16 18242.0 17 17769.0 18 17296.0 19 17296.0 20 21403.0 21 25510.0 22 24930.0 23 24350.0 24 30167.5 25 35985.0 26 35985.0 27 44069.5 28 52154.0 29 60491.5 30 68829.0 31 80920.5 32 93012.0 33 93012.0 34 109582.5 35 126153.0 36 148410.0 37 170667.0 38 193511.5 39 216356.0 40 216356.0 41 239614.5 42 262873.0 43 282060.0 44 301247.0 45 327277.0 46 353307.0 47 353307.0 48 385795.0 49 418283.0 50 420055.0 51 421827.0 52 420741.0 53 419655.0 54 419655.0 55 397939.5 56 376224.0 57 359854.5 58 343485.0 59 318943.5 60 294402.0 61 294402.0 62 255777.0 63 217152.0 64 196405.5 65 175659.0 66 149554.0 67 123449.0 68 123449.0 69 98620.0 70 73791.0 71 62036.5 72 50282.0 73 36816.5 74 23351.0 75 23351.0 76 18144.5 77 12938.0 78 10960.0 79 8982.0 80 7250.5 81 5519.0 82 5519.0 83 4505.5 84 3492.0 85 2949.5 86 2407.0 87 1622.0 88 837.0 89 837.0 90 619.5 91 402.0 92 291.0 93 180.0 94 180.5 95 181.0 96 181.0 97 95.5 98 10.0 99 9.0 100 8.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 4758847.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 50.42137071983532 #Duplication Level Percentage of deduplicated Percentage of total 1 78.82548229330996 39.744888648807965 2 11.250139905516098 11.344949496520806 3 3.856387262710915 5.833329954371941 4 1.8355530018133916 3.7020439352135837 5 1.0221148956553465 2.576821703605202 6 0.6677670322391732 2.020183745220935 7 0.46678530820055036 1.6475168549946777 8 0.3583081092585111 1.4453108807077317 9 0.24219005775354938 1.0990399217985038 >10 1.3359532434960446 11.898970698094164 >50 0.07192283006794695 2.4793079200620127 >100 0.05075384049094242 5.334861894617347 >500 0.009111616128740877 3.2315697143717035 >1k 0.007280970098298445 6.622215116872102 >5k 2.080277170942155E-4 0.7319463737562857 >10k+ 4.160554341884309E-5 0.2870431409849892 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CTTATACACATCTCCGAGCCCACGAGACGCTACGCTATCTCGT 13683 0.2875276301171271 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 8993 0.18897434609685917 No Hit TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 7851 0.16497693664032487 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 6440 0.13532689746066642 No Hit GGGTAGGCACACGCTGAGCCAGTCAGTGTAGCGCGCGTGCAGC 6115 0.12849751210744956 No Hit GTGTAGCGCGCGTGCAGCCCCGGACATCTAAGGGCATCACAGA 5492 0.1154061057226677 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 2.101349339451342E-5 2 0.0 0.0 0.0 4.202698678902684E-5 2.101349339451342E-5 3 0.0 0.0 0.0 4.202698678902684E-5 4.202698678902684E-5 4 0.0 0.0 0.0 1.6810794715610736E-4 4.202698678902684E-5 5 0.0 0.0 0.0 2.7317541412867445E-4 4.202698678902684E-5 6 0.0 0.0 0.0 2.7317541412867445E-4 4.202698678902684E-5 7 0.0 0.0 0.0 2.7317541412867445E-4 6.304048018354026E-5 8 0.0 0.0 0.0 2.7317541412867445E-4 8.405397357805368E-5 9 0.0 0.0 0.0 3.5722938770672814E-4 1.2608096036708052E-4 10 0.0 0.0 0.0 3.9925637449575495E-4 1.2608096036708052E-4 11 0.0 0.0 0.0 4.412833612847818E-4 1.2608096036708052E-4 12 0.0 0.0 0.0 4.622968546792952E-4 1.6810794715610736E-4 13 0.0 0.0 0.0 4.622968546792952E-4 2.311484273396476E-4 14 0.0 0.0 0.0 4.8331034807380863E-4 2.311484273396476E-4 15 0.0 2.101349339451342E-5 0.0 5.043238414683221E-4 2.9418890752318786E-4 16 0.0 2.101349339451342E-5 0.0 5.463508282573489E-4 3.7824288110124154E-4 17 0.0 2.101349339451342E-5 0.0 5.883778150463757E-4 3.7824288110124154E-4 18 0.0 2.101349339451342E-5 0.0 5.883778150463757E-4 4.412833612847818E-4 19 0.0 2.101349339451342E-5 0.0 5.883778150463757E-4 4.412833612847818E-4 20 0.0 2.101349339451342E-5 0.0 6.934452820189428E-4 4.8331034807380863E-4 21 0.0 2.101349339451342E-5 0.0 8.195262423860234E-4 5.253373348628354E-4 22 0.0 2.101349339451342E-5 0.0 0.0010086476829366442 5.463508282573489E-4 23 0.0 2.101349339451342E-5 0.0 0.0012187826168817784 5.673643216518623E-4 24 0.0 2.101349339451342E-5 0.0 0.0016390524847720467 5.673643216518623E-4 25 0.0 2.101349339451342E-5 0.0 0.0018702009121116944 5.673643216518623E-4 26 0.0 2.101349339451342E-5 0.0 0.002710740647892231 6.093913084408892E-4 27 0.0 2.101349339451342E-5 0.0 0.0048961439609216265 6.304048018354025E-4 28 0.0 2.101349339451342E-5 0.0 0.010716881631201844 6.304048018354025E-4 29 0.0 2.101349339451342E-5 0.0 0.01966862981726456 6.304048018354025E-4 30 0.0 2.101349339451342E-5 0.0 0.03444111567360749 6.304048018354025E-4 31 0.0 2.101349339451342E-5 0.0 0.07463992853731166 6.304048018354025E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TATACAC 2375 0.0 25.861053 3 CTTATAC 2465 0.0 24.016226 1 TTATACA 2530 0.0 23.252964 2 TACACAT 3185 0.0 19.400314 5 ATACACA 3425 0.0 18.581022 4 ATCTCCG 3455 0.0 17.188133 10 CGCTACG 3225 0.0 17.151937 28 CGCTATC 3260 0.0 16.96779 33 GACGCTA 3315 0.0 16.797888 26 TATCTCG 3275 0.0 16.72061 36 ACGCTAC 3335 0.0 16.697151 27 CTACGCT 3350 0.0 16.677612 30 CGAGACG 3390 0.0 16.535398 23 GCTACGC 3385 0.0 16.50517 29 CGCAATA 945 0.0 16.444445 36 TCTAGCG 940 0.0 16.335106 28 ACACATC 3800 0.0 16.114473 6 CCCACGA 3625 0.0 15.973793 19 ATCTCGT 3420 0.0 15.9576025 37 CACGAGA 3610 0.0 15.83518 21 >>END_MODULE