##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2727456.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 5258244 Sequences flagged as poor quality 0 Sequence length 43 %GC 49 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.288694666888794 31.0 31.0 34.0 30.0 34.0 2 31.58049968772845 31.0 31.0 34.0 30.0 34.0 3 31.685377285648972 31.0 31.0 34.0 30.0 34.0 4 35.4651204850897 37.0 35.0 37.0 33.0 37.0 5 35.26942758837361 37.0 35.0 37.0 33.0 37.0 6 35.25995731654902 37.0 35.0 37.0 32.0 37.0 7 35.18311854680003 37.0 35.0 37.0 32.0 37.0 8 35.16835487284348 37.0 35.0 37.0 32.0 37.0 9 36.795976185205554 39.0 37.0 39.0 32.0 39.0 10 36.57339465418493 39.0 35.0 39.0 32.0 39.0 11 36.690204562587816 39.0 35.0 39.0 32.0 39.0 12 36.51738127785626 39.0 35.0 39.0 32.0 39.0 13 36.62192302221046 39.0 35.0 39.0 32.0 39.0 14 37.723564558814694 40.0 37.0 41.0 32.0 41.0 15 37.66817610593955 39.0 36.0 41.0 32.0 41.0 16 37.62877930350893 39.0 36.0 41.0 32.0 41.0 17 37.57922530791648 39.0 36.0 41.0 32.0 41.0 18 37.55777822406111 39.0 36.0 41.0 32.0 41.0 19 37.55956893594135 39.0 36.0 41.0 32.0 41.0 20 37.527571561913064 39.0 36.0 41.0 32.0 41.0 21 37.465352691887254 39.0 36.0 41.0 32.0 41.0 22 37.38262792673752 39.0 36.0 41.0 31.0 41.0 23 37.29225460058529 39.0 36.0 41.0 31.0 41.0 24 37.20423034762175 39.0 36.0 41.0 31.0 41.0 25 37.11436004110878 39.0 36.0 41.0 31.0 41.0 26 36.906971224614146 39.0 36.0 40.0 30.0 41.0 27 36.823175759816394 39.0 36.0 40.0 30.0 41.0 28 36.66905548696485 39.0 35.0 40.0 30.0 41.0 29 36.52958877526414 39.0 35.0 40.0 30.0 41.0 30 36.655162065510844 39.0 35.0 40.0 30.0 41.0 31 36.657075822270706 39.0 35.0 40.0 30.0 41.0 32 36.623934720412365 39.0 35.0 40.0 30.0 41.0 33 36.5013835417299 39.0 35.0 40.0 30.0 41.0 34 36.46696159402264 39.0 35.0 40.0 30.0 41.0 35 36.37117029943837 38.0 35.0 40.0 30.0 41.0 36 36.29272567039491 38.0 35.0 40.0 30.0 41.0 37 36.200784900814796 38.0 35.0 40.0 29.0 41.0 38 36.07623666760234 38.0 35.0 40.0 29.0 41.0 39 35.95070426553047 38.0 35.0 40.0 28.0 41.0 40 35.812287904479135 38.0 34.0 40.0 28.0 41.0 41 35.675624790329245 38.0 34.0 40.0 27.0 41.0 42 35.531991288346454 38.0 34.0 40.0 27.0 41.0 43 35.365387570451276 38.0 34.0 40.0 26.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 12 4.0 13 1.0 14 11.0 15 35.0 16 114.0 17 213.0 18 368.0 19 777.0 20 1629.0 21 3264.0 22 5869.0 23 10429.0 24 17112.0 25 26791.0 26 40236.0 27 57778.0 28 80434.0 29 108837.0 30 141102.0 31 178573.0 32 220950.0 33 270133.0 34 333687.0 35 410785.0 36 514811.0 37 665652.0 38 960161.0 39 1208488.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 42.151391224903215 19.604111182364303 12.252227169374414 25.992270423358065 2 18.996817188399778 22.011492810147264 32.965510919614985 26.02617908183797 3 20.51656408489222 23.932894707815006 29.8008422583661 25.749698948926675 4 14.843662637184583 16.526867144240548 33.37787291727048 35.251597301304386 5 14.560697449566815 36.901463682552574 33.57765444129257 14.960184426588038 6 34.42510465470982 34.466278095881435 15.831482905700078 15.27713434370866 7 28.246768312767536 31.118240233811896 21.0218088015695 19.613182651851073 8 28.345755731381043 32.22547299060295 20.12399957095943 19.304771707056574 9 26.989960907101306 13.811397873510625 19.321050905967848 39.87759031342022 10 17.79902187878691 26.535645740288967 31.952948550885047 23.712383830039077 11 36.31917803738282 21.468878203445865 20.804093533886977 21.407850225284335 12 21.43835470548723 25.959940238604375 28.635909630667577 23.96579542524082 13 30.49040706365091 19.26165845479974 25.185251958638666 25.06268252291069 14 23.020727071623153 21.051419447252734 24.26370856886824 31.664144912255875 15 26.128019163812098 27.11277757365387 21.67872012025307 25.080483142280958 16 26.101451359046862 25.154176945763645 24.21112447425414 24.533247220935355 17 24.50106917822756 26.647051753399044 24.392667970524002 24.459211097849394 18 25.35357811467098 23.526637409751242 26.034299663537862 25.085484812039915 19 24.516112223015895 25.519032589586942 25.53772704347687 24.42712814392029 20 24.562002067610404 24.018246395564756 25.718300634204116 25.70145090262072 21 25.623440068585634 24.738486840854097 25.5340375988638 24.104035491696468 22 25.365293052205264 25.110721373903534 25.29403352145697 24.229952052434236 23 24.60186328363613 24.09500205772117 25.71025612352717 25.592878535115528 24 24.35505084967529 25.730091642761348 25.50575819608219 24.40909931148117 25 25.09132326305131 24.84783893634453 24.896980817170142 25.163856983434012 26 25.18264652610263 25.33047154144996 25.424723538884848 24.062158393562566 27 25.71970794812869 24.93147902607791 25.030029036309458 24.31878398948394 28 24.68643524340065 24.607055130952464 26.119080818615494 24.587428807031397 29 24.143155015248436 24.80811084460896 25.97268213494847 25.07605200519413 30 23.846839363102966 25.9077745346165 26.355699735501055 23.88968636677948 31 25.463576813856488 25.044387441891246 24.795977516448456 24.696058227803807 32 24.45580691957239 25.297875108115942 25.100337679270872 25.145980293040793 33 24.504035948122606 24.646707151665083 25.641468901024755 25.207787999187563 34 24.926306196517316 25.423905775388135 25.425332107068442 24.224455921026106 35 24.911111009683083 24.691189682335015 26.721316089553852 23.676383218428054 36 24.49256824141291 25.495336465938056 25.388589802983656 24.62350548966537 37 24.909608606979823 25.21916061711857 25.73246886222853 24.138761913673083 38 24.088231736678633 24.543878146392597 26.29065901087892 25.07723110604985 39 25.04480583251747 24.383539447770016 25.2216139076087 25.350040812103813 40 24.43074151751041 24.589634866696944 26.681873264154344 24.297750351638303 41 23.83615138437851 25.403233474901505 26.001722247959584 24.758892892760397 42 25.253430612957484 24.993610034072212 26.4143504941954 23.338608858774908 43 24.303303536313646 23.794996960962635 26.362641216345228 25.539058286378495 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 644.0 1 740.0 2 836.0 3 1788.0 4 2740.0 5 2740.0 6 3825.0 7 4910.0 8 4449.5 9 3989.0 10 5441.0 11 6893.0 12 6893.0 13 11961.0 14 17029.0 15 25428.5 16 33828.0 17 31436.5 18 29045.0 19 29045.0 20 35154.5 21 41264.0 22 37207.5 23 33151.0 24 39779.0 25 46407.0 26 46407.0 27 55449.0 28 64491.0 29 73667.5 30 82844.0 31 94431.5 32 106019.0 33 106019.0 34 123497.5 35 140976.0 36 163773.5 37 186571.0 38 209134.0 39 231697.0 40 231697.0 41 256237.5 42 280778.0 43 300059.5 44 319341.0 45 351439.0 46 383537.0 47 383537.0 48 433889.0 49 484241.0 50 480474.0 51 476707.0 52 464526.5 53 452346.0 54 452346.0 55 420560.5 56 388775.0 57 376858.0 58 364941.0 59 337867.0 60 310793.0 61 310793.0 62 269338.5 63 227884.0 64 211340.5 65 194797.0 66 167423.5 67 140050.0 68 140050.0 69 110429.5 70 80809.0 71 68570.5 72 56332.0 73 40374.0 74 24416.0 75 24416.0 76 19030.5 77 13645.0 78 11782.0 79 9919.0 80 8064.0 81 6209.0 82 6209.0 83 5232.0 84 4255.0 85 3684.5 86 3114.0 87 2081.5 88 1049.0 89 1049.0 90 784.0 91 519.0 92 375.0 93 231.0 94 216.5 95 202.0 96 202.0 97 107.5 98 13.0 99 10.0 100 7.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 5258244.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 47.6948816762755 #Duplication Level Percentage of deduplicated Percentage of total 1 79.3589392472288 37.85015217351314 2 11.217928441352896 10.700755393265041 3 3.711620361677675 5.310758819324148 4 1.6945171701924635 3.2327918372298696 5 0.9864334246048659 2.3523912734026156 6 0.6329305969127803 1.811252995742969 7 0.4232489454494286 1.4130765860973216 8 0.30795513040901884 1.1750306805168116 9 0.2344237022426875 1.0062729666521477 >10 1.2758425266026983 10.800756444270645 >50 0.07517804163717101 2.462860854525217 >100 0.05923788057838016 5.900895716667121 >500 0.011051152971906694 3.6752311431854263 >1k 0.009858579102593086 8.990599321014242 >5k 6.757896965485136E-4 2.085220973623141 >10k+ 1.5900934036435613E-4 1.231952820970084 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CTTATACACATCTCCGAGCCCACGAGACCAGAGAGGATCTCGT 20537 0.3905676495803542 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 17138 0.3259262978287048 No Hit TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 15525 0.2952506578241709 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 11777 0.22397210932014566 No Hit CCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTG 9965 0.18951193592385596 No Hit GTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGAAGC 9237 0.17566700974698016 No Hit GGGTAGGCACACGCTGAGCCAGTCAGTGTAGCGCGCGTGCAGC 8476 0.16119449763076799 No Hit GTGTAGCGCGCGTGCAGCCCCGGACATCTAAGGGCATCACAGA 7372 0.14019889529660473 No Hit ATACACATCTCCGAGCCCACGAGACCAGAGAGGATCTCGTATG 6871 0.13067099967213391 No Hit GTACATGGGGAATAATTGCAATCCCCGATCCCCATCACGAATG 6842 0.13011948475574736 No Hit TCTCCGAGCCCACGAGACCAGAGAGGATCTCGTATGCCGTCTT 6627 0.126030667272192 RNA PCR Primer, Index 23 (95% over 23bp) ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 6118 0.11635062960182144 No Hit CCTTAGATGTCCGGGGCTGCACGCGCGCTACACTGACTGGCTC 5713 0.10864843852814743 No Hit GAGTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGAA 5694 0.10828710116913556 No Hit ACACATCTCCGAGCCCACGAGACCAGAGAGGATCTCGTATGCC 5486 0.10433140797574247 No Hit GGATTGACAGATTGATAGCTCTTTCTCGATTCCGTGGGTGGTG 5481 0.10423631919705513 No Hit CATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCG 5431 0.1032854314101818 No Hit GCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAATGTTTT 5396 0.10261980995937046 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 5.705326721240019E-5 2 0.0 0.0 0.0 0.0 5.705326721240019E-5 3 0.0 0.0 0.0 0.0 5.705326721240019E-5 4 0.0 0.0 0.0 7.607102294986691E-5 5.705326721240019E-5 5 0.0 0.0 0.0 1.331242901622671E-4 5.705326721240019E-5 6 0.0 0.0 0.0 1.331242901622671E-4 5.705326721240019E-5 7 0.0 0.0 0.0 1.5214204589973382E-4 5.705326721240019E-5 8 0.0 0.0 0.0 1.7115980163720057E-4 5.705326721240019E-5 9 0.0 0.0 0.0 1.901775573746673E-4 7.607102294986691E-5 10 0.0 0.0 0.0 2.09195313112134E-4 7.607102294986691E-5 11 0.0 0.0 0.0 2.472308245870675E-4 9.508877868733364E-5 12 0.0 0.0 0.0 2.8526633606200093E-4 2.09195313112134E-4 13 0.0 0.0 0.0 2.8526633606200093E-4 2.2821306884960075E-4 14 0.0 0.0 0.0 3.0428409179946765E-4 2.8526633606200093E-4 15 0.0 0.0 0.0 3.4231960327440114E-4 3.803551147493346E-4 16 1.9017755737466728E-5 0.0 0.0 3.803551147493346E-4 3.993728704868013E-4 17 1.9017755737466728E-5 0.0 0.0 4.374083819617348E-4 3.993728704868013E-4 18 1.9017755737466728E-5 0.0 0.0 4.564261376992015E-4 4.374083819617348E-4 19 1.9017755737466728E-5 0.0 0.0 5.134794049116017E-4 4.374083819617348E-4 20 1.9017755737466728E-5 0.0 0.0 6.656214508113354E-4 5.324971606490684E-4 21 1.9017755737466728E-5 0.0 0.0 8.557990081860027E-4 5.515149163865351E-4 22 1.9017755737466728E-5 0.0 0.0 0.001198118611460404 5.515149163865351E-4 23 1.9017755737466728E-5 0.0 0.0 0.0016355269934221386 5.705326721240019E-4 24 1.9017755737466728E-5 0.0 0.0 0.002377219467183341 5.705326721240019E-4 25 1.9017755737466728E-5 0.0 0.0 0.002871681116357476 5.705326721240019E-4 26 1.9017755737466728E-5 0.0 0.0 0.004374083819617348 6.656214508113354E-4 27 1.9017755737466728E-5 0.0 0.0 0.008405848035960294 6.656214508113354E-4 28 1.9017755737466728E-5 0.0 0.0 0.016659554026020856 6.656214508113354E-4 29 1.9017755737466728E-5 0.0 0.0 0.028792882186524628 6.656214508113354E-4 30 1.9017755737466728E-5 0.0 0.0 0.049217951848563896 6.656214508113354E-4 31 1.9017755737466728E-5 0.0 0.0 0.10455962104459207 6.656214508113354E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TATACAC 3225 0.0 26.903877 3 TTATACA 3565 0.0 24.18233 2 CTTATAC 3525 0.0 24.141844 1 GCCGTCT 1310 0.0 22.877863 36 TACACAT 4200 0.0 21.186905 5 ATACACA 4490 0.0 20.065702 4 ACACATC 5035 0.0 17.636545 6 ATGCCGT 1695 0.0 17.572271 34 TGCCGTC 1710 0.0 17.526316 35 ATCTCCG 5095 0.0 17.319921 10 TATGCCG 1755 0.0 17.182337 33 ACATCTC 5440 0.0 16.629595 8 CACATCT 5590 0.0 15.984794 7 CCGTCTT 2150 0.0 15.230232 37 TCTCCGA 6075 0.0 14.586831 11 CGAGACC 6000 0.0 14.491666 23 CCCACGA 6105 0.0 14.181818 19 ATCTCGT 5835 0.0 14.172236 37 GATCTCG 5975 0.0 14.149791 36 CACGAGA 6115 0.0 14.09812 21 >>END_MODULE