##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2727453.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 5900514 Sequences flagged as poor quality 0 Sequence length 43 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.323239297457814 31.0 31.0 34.0 30.0 34.0 2 31.608405810070106 31.0 31.0 34.0 30.0 34.0 3 31.715217352251006 31.0 31.0 34.0 30.0 34.0 4 35.49224948877335 37.0 35.0 37.0 33.0 37.0 5 35.29686430707562 37.0 35.0 37.0 33.0 37.0 6 35.286711801717615 37.0 35.0 37.0 32.0 37.0 7 35.21285332091408 37.0 35.0 37.0 32.0 37.0 8 35.19650576204039 37.0 35.0 37.0 32.0 37.0 9 36.83039816531238 39.0 37.0 39.0 32.0 39.0 10 36.60777298384514 39.0 35.0 39.0 32.0 39.0 11 36.720298773971216 39.0 35.0 39.0 32.0 39.0 12 36.550911835816336 39.0 35.0 39.0 32.0 39.0 13 36.65365746102797 39.0 35.0 39.0 32.0 39.0 14 37.765029622843024 40.0 37.0 41.0 32.0 41.0 15 37.7100147546468 40.0 37.0 41.0 32.0 41.0 16 37.67513948784801 39.0 36.0 41.0 32.0 41.0 17 37.62147789158707 39.0 36.0 41.0 32.0 41.0 18 37.59438855665795 39.0 36.0 41.0 32.0 41.0 19 37.58747102371082 39.0 36.0 41.0 32.0 41.0 20 37.55507960831887 39.0 36.0 41.0 32.0 41.0 21 37.4876732772772 39.0 36.0 41.0 32.0 41.0 22 37.408183422664536 39.0 36.0 41.0 31.0 41.0 23 37.314571239047986 39.0 36.0 41.0 31.0 41.0 24 37.227074963299806 39.0 36.0 41.0 31.0 41.0 25 37.13667724540608 39.0 36.0 41.0 31.0 41.0 26 36.937173100512936 39.0 36.0 40.0 30.0 41.0 27 36.85854723842702 39.0 36.0 40.0 30.0 41.0 28 36.68983532621056 39.0 35.0 40.0 30.0 41.0 29 36.55929449536091 39.0 35.0 40.0 30.0 41.0 30 36.6894223113444 39.0 35.0 40.0 30.0 41.0 31 36.68906302061143 39.0 35.0 40.0 30.0 41.0 32 36.665458636315414 39.0 35.0 40.0 30.0 41.0 33 36.56037185912956 39.0 35.0 40.0 30.0 41.0 34 36.53092442455013 39.0 35.0 40.0 30.0 41.0 35 36.4257605354381 39.0 35.0 40.0 30.0 41.0 36 36.35406203595144 38.0 35.0 40.0 30.0 41.0 37 36.26256729498481 38.0 35.0 40.0 30.0 41.0 38 36.134478114957446 38.0 35.0 40.0 29.0 41.0 39 36.01423198046814 38.0 35.0 40.0 29.0 41.0 40 35.889248292606375 38.0 35.0 40.0 28.0 41.0 41 35.74744030774268 38.0 34.0 40.0 27.0 41.0 42 35.605340144943305 38.0 34.0 40.0 27.0 41.0 43 35.442027084420104 38.0 34.0 40.0 27.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 1.0 11 4.0 12 2.0 13 9.0 14 17.0 15 43.0 16 131.0 17 259.0 18 457.0 19 910.0 20 1770.0 21 3510.0 22 6406.0 23 11330.0 24 18543.0 25 28811.0 26 43548.0 27 63126.0 28 88287.0 29 118920.0 30 155776.0 31 197066.0 32 244846.0 33 300321.0 34 372256.0 35 460584.0 36 574393.0 37 745963.0 38 1085938.0 39 1377287.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 42.62643898480709 19.21347869016157 11.932960416668784 26.227121908362562 2 19.196581857106008 21.86417996805024 32.564332531030345 26.374905643813403 3 20.558785217694595 23.751185066250162 29.403218092525496 26.28681162352975 4 14.89104169568956 16.153185976679318 33.63632388635973 35.31944844127139 5 14.85741750633928 36.564916208994674 33.47371093433555 15.103955350330498 6 34.880046043446384 34.39402058871481 15.755813815542172 14.970119552296628 7 28.74817346421007 30.76659084276387 21.13988713525635 19.34534855776971 8 28.476264949121383 31.928082875491864 20.137923577505283 19.457728597881474 9 27.233779972388845 13.649776951635062 19.16871987762422 39.947723198351866 10 17.77645133966295 26.094235180189386 31.982518811073067 24.14679466907459 11 36.938832786431824 21.25562281523271 20.612509350880277 21.19303504745519 12 21.76966277853082 25.679525546418496 28.585577459861973 23.965234215188712 13 30.606062454897998 18.97417750385814 24.86076636713344 25.558993674110425 14 23.196182569857474 20.790002362506048 24.046379688278005 31.967435379358477 15 26.408563728515855 27.01213826456475 21.384272624384927 25.19502538253447 16 26.26116978961494 24.990755042696282 24.05063355497504 24.69744161271374 17 24.848208139155332 26.120283758330203 24.27285148378599 24.75865661872847 18 25.636749611982957 23.272192897093372 25.90282812649881 25.188229364424863 19 25.124862003547488 25.265375185958376 25.10669409478564 24.503068715708494 20 24.968807802167746 23.802028094501598 25.37175574873647 25.85740835459419 21 25.97902487817163 24.643225996921625 25.080916679462163 24.296832445444583 22 25.745943488990957 24.45347981548726 24.89935622557628 24.9012204699455 23 24.543116074294545 23.91220493672246 25.507811692337313 26.03686729664568 24 24.630599978239186 25.426869591361022 25.17167148489098 24.770858945508813 25 25.304897166585828 24.4111445206299 24.5669275591923 25.717030753591974 26 25.223039891101013 25.155181396061426 25.17395942116229 24.44781929167527 27 26.256898975241818 24.22214403694322 24.548793545782623 24.97216344203234 28 24.738404145808314 24.41485606169225 25.914589813700978 24.932149978798456 29 24.741675047292492 24.41182242767325 25.675237784369294 25.171264740664967 30 24.237227468657814 25.37258618486457 26.052052414416778 24.338133932060835 31 25.360265224351643 24.903525353892896 24.51566083903877 25.220548582716688 32 24.506204035784002 24.71211830020232 24.745030687157087 26.03664697685659 33 24.299018695659395 24.412602020773104 25.57716158287227 25.711217700695226 34 25.24381774197977 24.594637009589334 25.203685645013294 24.9578596034176 35 25.05490199667351 24.65266585250031 26.108250908310698 24.184181242515482 36 24.50703447191211 25.277831727879978 25.23592012492471 24.979213675283205 37 25.399549937513914 24.884221950833435 25.315387778081703 24.40084033357094 38 24.538726626188836 24.354403701101294 25.827851607504027 25.279018065205843 39 25.430750609184216 24.0298387564202 24.903423667836392 25.635986966559184 40 24.939657799303586 24.485104179059654 26.06318703760384 24.512050984032914 41 24.150268942671772 25.04698743194237 25.814784949243403 24.98795867614245 42 25.71238709034501 24.880442619066745 25.89509998620459 23.512070304383652 43 24.81702441516112 23.52517085799644 25.797718639427007 25.860086087415436 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 327.0 1 459.5 2 592.0 3 1467.0 4 2342.0 5 2342.0 6 3215.0 7 4088.0 8 3741.5 9 3395.0 10 4536.0 11 5677.0 12 5677.0 13 10191.0 14 14705.0 15 22344.5 16 29984.0 17 28151.5 18 26319.0 19 26319.0 20 32215.0 21 38111.0 22 35308.0 23 32505.0 24 40353.5 25 48202.0 26 48202.0 27 58871.0 28 69540.0 29 78141.0 30 86742.0 31 99368.0 32 111994.0 33 111994.0 34 132915.5 35 153837.0 36 180947.0 37 208057.0 38 235004.0 39 261951.0 40 261951.0 41 286172.5 42 310394.0 43 327403.5 44 344413.0 45 381547.0 46 418681.0 47 418681.0 48 481697.5 49 544714.0 50 542111.0 51 539508.0 52 514088.0 53 488668.0 54 488668.0 55 467976.0 56 447284.0 57 433633.0 58 419982.0 59 393486.5 60 366991.0 61 366991.0 62 321090.5 63 275190.0 64 252956.0 65 230722.0 66 198523.5 67 166325.0 68 166325.0 69 132589.5 70 98854.0 71 84142.0 72 69430.0 73 50200.5 74 30971.0 75 30971.0 76 24081.0 77 17191.0 78 15038.5 79 12886.0 80 10453.5 81 8021.0 82 8021.0 83 6808.5 84 5596.0 85 4743.0 86 3890.0 87 2566.5 88 1243.0 89 1243.0 90 944.0 91 645.0 92 448.0 93 251.0 94 258.0 95 265.0 96 265.0 97 140.0 98 15.0 99 15.5 100 16.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 5900514.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 41.03461453541449 #Duplication Level Percentage of deduplicated Percentage of total 1 78.39039727367206 32.1671973540314 2 10.89653421002374 8.942701621605627 3 3.756220329039648 4.624051599366892 4 1.883397203924271 3.091379131204396 5 1.1135582824620658 2.2847217441774537 6 0.7092865416641077 1.7463179899406318 7 0.49837027487713503 1.431530248784426 8 0.3766532213570931 1.2364655801528373 9 0.2848774683483757 1.0520853393150302 >10 1.8260812315376578 13.968601244164244 >50 0.1454414484614774 4.100503421626291 >100 0.09138129404974608 7.458769917218524 >500 0.013632899383845227 3.966968674090986 >1k 0.01330339461418975 10.99284756848253 >5k 6.178047034445992E-4 1.6462001720591142 >10k+ 2.471218813778397E-4 1.2896583937796047 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 14894 0.2524186875923013 No Hit CCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTG 13618 0.23079345290935668 No Hit TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 13453 0.22799708635552768 No Hit GTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGAAGC 12756 0.21618455612511045 No Hit CTTATACACATCTCCGAGCCCACGAGACGGACTCCTATCTCGT 11143 0.1888479546019211 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 10443 0.17698458134325246 No Hit GGGTAGGCACACGCTGAGCCAGTCAGTGTAGCGCGCGTGCAGC 8822 0.14951239841139263 No Hit GTGTAGCGCGCGTGCAGCCCCGGACATCTAAGGGCATCACAGA 8256 0.13992001374795482 No Hit GAGTACATGGGAAGCAGTGGTATCAACGCAGAGTACATGGGAA 7605 0.128887076617393 No Hit GTACATGGGGAATAATTGCAATCCCCGATCCCCATCACGAATG 7399 0.12539585534412764 No Hit CATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTGCG 7319 0.12404004125742266 No Hit GCGCAAGACGGACCAGAGCGAAAGCATTTGCCAAGAATGTTTT 7242 0.1227350701989691 No Hit CCTTAGATGTCCGGGGCTGCACGCGCGCTACACTGACTGGCTC 6283 0.10648224883459305 No Hit GGATTGACAGATTGATAGCTCTTTCTCGATTCCGTGGGTGGTG 6155 0.10431294629586506 No Hit GTGCATGGCCGTTCTTAGTTGGTGGAGCGATTTGTCTGGTTAA 5902 0.10002518424666056 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 1.0168605650287416E-4 2 0.0 0.0 0.0 3.389535216762472E-5 1.0168605650287416E-4 3 0.0 0.0 0.0 3.389535216762472E-5 1.0168605650287416E-4 4 0.0 1.694767608381236E-5 0.0 6.779070433524944E-5 1.0168605650287416E-4 5 0.0 1.694767608381236E-5 0.0 1.3558140867049888E-4 1.0168605650287416E-4 6 0.0 1.694767608381236E-5 0.0 1.3558140867049888E-4 1.5252908475431122E-4 7 0.0 1.694767608381236E-5 0.0 1.3558140867049888E-4 1.5252908475431122E-4 8 0.0 1.694767608381236E-5 0.0 1.3558140867049888E-4 1.694767608381236E-4 9 0.0 1.694767608381236E-5 0.0 2.2031978908956066E-4 2.0337211300574832E-4 10 0.0 1.694767608381236E-5 0.0 2.542151412571854E-4 2.0337211300574832E-4 11 0.0 1.694767608381236E-5 0.0 2.8811049342481013E-4 2.0337211300574832E-4 12 0.0 1.694767608381236E-5 0.0 3.220058455924348E-4 2.3726746517337304E-4 13 0.0 1.694767608381236E-5 0.0 3.389535216762472E-4 2.542151412571854E-4 14 0.0 1.694767608381236E-5 0.0 3.728488738438719E-4 3.389535216762472E-4 15 0.0 1.694767608381236E-5 0.0 4.0674422601149663E-4 4.4063957817912133E-4 16 0.0 1.694767608381236E-5 0.0 4.23691902095309E-4 4.575872542629337E-4 17 0.0 1.694767608381236E-5 0.0 4.575872542629337E-4 4.745349303467461E-4 18 0.0 1.694767608381236E-5 0.0 4.745349303467461E-4 5.423256346819955E-4 19 0.0 1.694767608381236E-5 0.0 5.762209868496203E-4 5.423256346819955E-4 20 0.0 1.694767608381236E-5 0.0 6.440116911848696E-4 6.440116911848696E-4 21 0.0 1.694767608381236E-5 0.0 8.304361281068056E-4 6.60959367268682E-4 22 0.0 1.694767608381236E-5 0.0 0.0011015989454478035 6.779070433524944E-4 23 0.0 1.694767608381236E-5 0.0 0.0014066571149564258 7.287500716039315E-4 24 0.0 1.694767608381236E-5 0.0 0.0020845641583089203 7.287500716039315E-4 25 0.0 1.694767608381236E-5 0.0 0.0025252037364880417 7.456977476877438E-4 26 0.0 1.694767608381236E-5 0.0 0.003830174794941593 8.134884520229933E-4 27 0.0 1.694767608381236E-5 0.0 0.007406134448626001 8.643314802744303E-4 28 0.0 1.694767608381236E-5 0.0 0.016269769040459865 8.812791563582427E-4 29 0.0 1.694767608381236E-5 0.0 0.027251863142770272 8.982268324420551E-4 30 0.0 1.694767608381236E-5 0.0 0.04543671958070093 8.982268324420551E-4 31 0.0 1.694767608381236E-5 0.0 0.09436466043466722 8.982268324420551E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TATACAC 2060 0.0 22.092232 3 CTTATAC 2335 0.0 18.301926 1 TACACAT 2565 0.0 17.526316 5 TTATACA 2535 0.0 17.368837 2 ATCTCCG 2560 0.0 16.982422 10 ATACACA 2905 0.0 16.876076 4 AAGACGG 1740 0.0 16.160921 5 TATCTCG 2605 0.0 15.978887 36 CGTAATA 70 0.002594197 15.857143 2 ACGGACT 2635 0.0 15.726755 27 CAAGACG 1885 0.0 15.506632 4 CACGAGA 2765 0.0 15.32188 21 ACACATC 2980 0.0 15.147651 6 CTATCTC 2815 0.0 14.918295 35 CGGACTC 2840 0.0 14.917254 28 ATCTCGT 2855 0.0 14.83888 37 CGAGACG 2890 0.0 14.595156 23 CCTATCT 2925 0.0 14.420512 34 CCCACGA 2980 0.0 14.092281 19 ACATCTC 3285 0.0 13.910197 8 >>END_MODULE