##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2727450.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 10970815 Sequences flagged as poor quality 0 Sequence length 43 %GC 47 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.944250814547505 31.0 31.0 33.0 30.0 34.0 2 31.269383723998626 31.0 31.0 34.0 30.0 34.0 3 31.451880557643165 31.0 31.0 34.0 30.0 34.0 4 35.24177921148064 35.0 35.0 37.0 33.0 37.0 5 34.93239745634212 35.0 35.0 37.0 32.0 37.0 6 34.911153455782454 35.0 35.0 37.0 32.0 37.0 7 34.77256265828929 35.0 35.0 37.0 32.0 37.0 8 34.70328685699285 35.0 35.0 37.0 31.0 37.0 9 36.12691901194214 38.0 35.0 39.0 31.0 39.0 10 35.86050033657481 37.0 35.0 39.0 30.0 39.0 11 35.9161775127919 37.0 35.0 39.0 30.0 39.0 12 35.76728793621987 37.0 35.0 39.0 30.0 39.0 13 35.7797469923611 37.0 35.0 39.0 30.0 39.0 14 36.566084379328245 38.0 35.0 40.0 30.0 41.0 15 36.5437587818225 38.0 35.0 40.0 30.0 41.0 16 36.46156178916516 38.0 35.0 40.0 30.0 41.0 17 36.90080627555929 38.0 36.0 40.0 31.0 41.0 18 36.93415220291291 38.0 36.0 40.0 31.0 41.0 19 36.972042004171975 39.0 36.0 40.0 31.0 41.0 20 37.04525215309893 39.0 36.0 40.0 31.0 41.0 21 37.03470298241288 39.0 36.0 40.0 31.0 41.0 22 36.91700972079103 39.0 36.0 40.0 31.0 41.0 23 36.74500071325603 39.0 36.0 40.0 30.0 41.0 24 36.580070851618586 39.0 35.0 40.0 30.0 41.0 25 36.58026500310141 39.0 35.0 40.0 30.0 41.0 26 36.10975757042663 38.0 35.0 40.0 29.0 41.0 27 35.93563978610523 38.0 34.0 40.0 27.0 41.0 28 35.72950405234251 38.0 34.0 40.0 27.0 41.0 29 35.551853257939364 38.0 34.0 40.0 27.0 41.0 30 35.39583166792987 38.0 34.0 40.0 26.0 41.0 31 35.19614468022658 38.0 34.0 40.0 25.0 41.0 32 35.08376989312097 38.0 34.0 40.0 25.0 41.0 33 34.94214121740272 38.0 33.0 40.0 25.0 41.0 34 34.87167015394937 38.0 33.0 40.0 25.0 41.0 35 34.59279351625198 38.0 33.0 40.0 24.0 41.0 36 34.39004549798716 38.0 33.0 40.0 24.0 41.0 37 34.25593604486084 38.0 33.0 40.0 23.0 41.0 38 34.109885455182685 37.0 33.0 40.0 23.0 41.0 39 34.067615487090066 37.0 33.0 40.0 22.0 41.0 40 33.887259333057756 37.0 32.0 40.0 21.0 41.0 41 33.68560631092585 37.0 32.0 40.0 20.0 41.0 42 33.47437888616297 37.0 31.0 40.0 19.0 41.0 43 33.16675880506599 37.0 31.0 40.0 18.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 3.0 9 13.0 10 33.0 11 52.0 12 85.0 13 85.0 14 185.0 15 363.0 16 697.0 17 1294.0 18 2556.0 19 5297.0 20 10505.0 21 19448.0 22 34184.0 23 54324.0 24 79863.0 25 111862.0 26 151065.0 27 197900.0 28 254854.0 29 320068.0 30 395974.0 31 482252.0 32 579075.0 33 689919.0 34 821389.0 35 968975.0 36 1164488.0 37 1407136.0 38 1783633.0 39 1433238.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 37.43581493261895 23.32164018808083 14.669092496774397 24.573452382525822 2 19.802621774225525 24.441602560976555 31.217534886879417 24.538240777918503 3 18.951044202276677 25.553580112325292 30.74411518196232 24.751260503435706 4 15.019431099694962 16.910247780133016 33.267929502047025 34.802391618125 5 12.566441052920862 40.48713792001779 33.61329126414036 13.333129762920986 6 33.76798350897358 38.60648456837528 13.930578539515977 13.694953383135164 7 28.24885844852912 32.463914485842665 20.365141514098998 18.922085551529218 8 28.784443088321147 35.39654984611444 18.241853499489327 17.577153566075083 9 27.681453018759317 13.675128055664052 17.92368206008396 40.71973686549267 10 16.29836981117629 29.648845596247863 32.42384453661829 21.628940055957557 11 36.984043573791006 23.057466560141613 19.54031674036979 20.41817312569759 12 21.042903375911454 27.548655227528673 28.97774686748432 22.430694529075552 13 30.83844728035246 20.416450373103547 24.223651570097573 24.521450776446418 14 22.304942704803608 21.255531152425778 25.126155167141185 31.31337097562943 15 24.97630303673884 29.227536878527253 21.46651821218387 24.329641872550035 16 24.128881947239105 26.900699720121068 24.079587523807483 24.89083080883234 17 23.5241228659858 27.614274782684788 25.249846980374745 23.611755370954665 18 23.66268139604943 26.03292462775099 26.39881357948338 23.905580396716196 19 24.217179854003554 26.50672716657787 26.5460952536343 22.729997725784273 20 23.993750692177382 25.928338049634412 26.35218987832718 23.725721379861024 21 24.282188697922624 26.411994004091767 26.08580128276705 23.220016015218558 22 24.51625517338502 26.08998511049544 25.61955515611192 23.774204560007618 23 23.606423041496917 26.127393452537483 25.861752294610746 24.404431211354854 24 23.67592562630944 26.662412956557922 25.829676282026448 23.831985135106187 25 23.978510256530623 26.030171869637762 25.661812727677933 24.329505146153682 26 24.041203866804793 26.381002687585198 25.875443164432177 23.702350281177832 27 24.18751022599506 26.462063210436053 25.46929284652052 23.88113371704837 28 23.617206196622583 26.703959550862905 26.07425245982181 23.604581792692702 29 23.782280532485508 26.610721263643583 26.043516365921764 23.56348183794914 30 23.641215351822083 27.09391234835334 25.832547536349853 23.43232476347473 31 23.96958658039535 26.443750988417907 25.802403923500673 23.784258507686072 32 23.151671047228486 26.939156297868482 25.72853520909796 24.180637445805075 33 23.188650979895296 26.662677294257538 26.00782166138067 24.140850064466495 34 23.521032849428234 26.630008800622377 26.285868461003126 23.563089888946262 35 23.67155949671925 26.755341330612175 26.163069926892398 23.41002924577618 36 23.483578931920736 26.61658226850056 26.053761730555113 23.846077069023586 37 23.408652866719564 26.317415798188193 26.386325901949853 23.887605433142387 38 23.23593096775399 26.10389474255103 26.616691649617646 24.043482640077332 39 23.338165851853304 25.77348173312557 26.767035995046857 24.121316419974267 40 23.198440589874135 25.953842080100703 27.161728640944176 23.685988689080983 41 22.686345544975463 25.926214232944407 27.36426600940769 24.02317421267244 42 22.92397602183612 26.068473490802642 27.24617997842457 23.761370508936665 43 22.645318510976622 25.37476933117549 27.48238850076316 24.49752365708473 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 3205.0 1 3125.0 2 3045.0 3 3266.0 4 3487.0 5 3487.0 6 4625.0 7 5763.0 8 7902.0 9 10041.0 10 14968.0 11 19895.0 12 19895.0 13 46977.0 14 74059.0 15 123446.0 16 172833.0 17 133257.5 18 93682.0 19 93682.0 20 108961.0 21 124240.0 22 109336.0 23 94432.0 24 110805.0 25 127178.0 26 127178.0 27 148480.5 28 169783.0 29 189268.5 30 208754.0 31 235275.5 32 261797.0 33 261797.0 34 297014.0 35 332231.0 36 380599.0 37 428967.0 38 482739.5 39 536512.0 40 536512.0 41 580631.5 42 624751.0 43 669025.0 44 713299.0 45 773823.0 46 834347.0 47 834347.0 48 897971.5 49 961596.0 50 959438.0 51 957280.0 52 911565.0 53 865850.0 54 865850.0 55 832030.5 56 798211.0 57 752950.0 58 707689.0 59 648867.5 60 590046.0 61 590046.0 62 507438.0 63 424830.0 64 362899.5 65 300969.0 66 249410.5 67 197852.0 68 197852.0 69 160257.0 70 122662.0 71 102567.5 72 82473.0 73 65475.0 74 48477.0 75 48477.0 76 38036.5 77 27596.0 78 22829.5 79 18063.0 80 13662.5 81 9262.0 82 9262.0 83 7563.0 84 5864.0 85 4776.0 86 3688.0 87 3279.5 88 2871.0 89 2871.0 90 2119.5 91 1368.0 92 1076.5 93 785.0 94 733.5 95 682.0 96 682.0 97 423.5 98 165.0 99 200.0 100 235.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 1.0970815E7 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 48.724035928652114 #Duplication Level Percentage of deduplicated Percentage of total 1 79.93185030645725 38.946023461754656 2 9.759463128010628 9.510408641870907 3 3.6056963731174063 5.270522388947494 4 1.8273163705795334 3.5613691397252545 5 1.12300827606516 2.7358747795586265 6 0.6992927091023946 2.0443417849769725 7 0.5118429369291261 1.745733755413309 8 0.3940734805441295 1.5360680339648922 9 0.2923894861690769 1.282175624633601 >10 1.6494148726509827 14.811870944329183 >50 0.12429131944254679 4.159570536427946 >100 0.07114997377713282 6.520320382517643 >500 0.005829640418521862 1.9585126765584617 >1k 0.004134570488275909 3.5654638254974316 >5k 1.70692786826305E-4 0.6212033718682425 >10k+ 7.586346081169111E-5 1.7305406519553412 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 92742 0.8453519633682639 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 39505 0.3600917525270456 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 30280 0.27600501877025546 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 24742 0.22552563323691086 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 3.6460372360667826E-5 2 0.0 0.0 0.0 0.0 3.6460372360667826E-5 3 0.0 0.0 0.0 0.0 3.6460372360667826E-5 4 0.0 0.0 0.0 9.115093090166956E-6 3.6460372360667826E-5 5 0.0 0.0 0.0 9.115093090166956E-6 3.6460372360667826E-5 6 0.0 0.0 0.0 9.115093090166956E-6 5.469055854100174E-5 7 0.0 0.0 0.0 1.8230186180333913E-5 7.292074472133565E-5 8 0.0 0.0 0.0 1.8230186180333913E-5 7.292074472133565E-5 9 0.0 0.0 0.0 5.469055854100174E-5 1.0026602399183652E-4 10 0.0 0.0 0.0 1.3672639635250436E-4 1.0026602399183652E-4 11 0.0 0.0 0.0 1.7318676871317217E-4 1.0026602399183652E-4 12 0.0 0.0 0.0 1.914169548935061E-4 1.5495658253283825E-4 13 0.0 0.0 0.0 2.0964714107384E-4 1.8230186180333914E-4 14 0.0 0.0 0.0 2.1876223416400695E-4 2.0053204798367304E-4 15 0.0 0.0 0.0 3.190282581558435E-4 2.2787732725417393E-4 16 0.0 0.0 0.0 4.648697475985148E-4 2.461075134345078E-4 17 0.0 0.0 0.0 6.836319817625217E-4 2.461075134345078E-4 18 0.0 0.0 0.0 7.474376333936905E-4 2.6433769961484177E-4 19 0.0 0.0 0.0 9.844300537380313E-4 2.6433769961484177E-4 20 0.0 0.0 0.0 0.0011940771948118713 3.0079807197550955E-4 21 0.0 9.115093090166956E-6 0.0 0.0019779752005662297 3.0079807197550955E-4 22 0.0 9.115093090166956E-6 0.0 0.0032358580470092696 3.099131650656765E-4 23 0.0 9.115093090166956E-6 0.0 0.004995071013411493 3.4637353742634434E-4 24 0.0 1.8230186180333913E-5 0.0 0.008240044153510928 3.554886305165113E-4 25 0.0 2.734527927050087E-5 0.0 0.00976226469956881 3.646037236066783E-4 26 0.0 2.734527927050087E-5 0.0 0.012888741629496077 3.7371881669684523E-4 27 0.0 2.734527927050087E-5 0.0 0.03462823864954427 3.7371881669684523E-4 28 0.0 2.734527927050087E-5 0.0 0.06232900655056165 3.7371881669684523E-4 29 0.0 2.734527927050087E-5 0.0 0.09667467731431074 3.7371881669684523E-4 30 0.0 4.5575465450834786E-5 0.0 0.1484392909733689 3.7371881669684523E-4 31 0.0 4.5575465450834786E-5 0.0 0.28229443300247065 3.7371881669684523E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TATACCG 665 0.0 17.24812 5 CGAACGT 605 0.0 17.123968 4 TATACTG 1715 0.0 15.425656 5 CCGATAA 940 0.0 14.957446 9 TCGAACG 705 0.0 14.695036 3 AAGACGG 2535 0.0 14.449704 5 CGAACGA 945 0.0 14.291005 16 ATACCGA 725 0.0 14.034482 6 ACGAACG 1020 0.0 13.965686 15 CGATAAC 1015 0.0 13.6699505 10 ACGGACC 2375 0.0 13.631579 8 TAGTACT 1140 0.0 13.631578 4 TACGACG 1635 0.0 13.577981 5 CGACGGT 1515 0.0 13.554456 7 CAAGACG 2855 0.0 13.542907 4 CTAGAGT 2835 0.0 13.507937 4 TAACGAA 1070 0.0 13.485981 13 TAGAGTG 1555 0.0 13.443729 5 TATCTAG 2065 0.0 13.438257 1 TTAGAGT 1520 0.0 13.388158 4 >>END_MODULE