##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2727446.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 7474314 Sequences flagged as poor quality 0 Sequence length 43 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.00389052426751 31.0 31.0 33.0 30.0 34.0 2 31.337121908445376 31.0 31.0 34.0 30.0 34.0 3 31.522274418762713 31.0 31.0 34.0 30.0 34.0 4 35.297738361005436 35.0 35.0 37.0 33.0 37.0 5 34.99896017213085 35.0 35.0 37.0 32.0 37.0 6 34.97947129328524 35.0 35.0 37.0 32.0 37.0 7 34.846035636180126 35.0 35.0 37.0 32.0 37.0 8 34.77061413261471 35.0 35.0 37.0 32.0 37.0 9 36.21712895658384 38.0 35.0 39.0 32.0 39.0 10 35.95278335911496 37.0 35.0 39.0 30.0 39.0 11 36.00765127073869 37.0 35.0 39.0 30.0 39.0 12 35.88394332911355 37.0 35.0 39.0 30.0 39.0 13 35.88117892826017 37.0 35.0 39.0 30.0 39.0 14 36.70147052960312 38.0 36.0 40.0 31.0 41.0 15 36.67238023449376 38.0 36.0 40.0 30.0 41.0 16 36.611415977439535 38.0 35.0 40.0 30.0 41.0 17 37.035204033440394 39.0 36.0 40.0 31.0 41.0 18 37.05492129444923 39.0 36.0 40.0 31.0 41.0 19 37.08720238405826 39.0 36.0 40.0 31.0 41.0 20 37.1641220853178 39.0 36.0 40.0 31.0 41.0 21 37.16402963536186 39.0 36.0 40.0 31.0 41.0 22 37.05076251813879 39.0 36.0 40.0 31.0 41.0 23 36.882694652646386 39.0 36.0 40.0 30.0 41.0 24 36.71323187653074 39.0 36.0 40.0 30.0 41.0 25 36.723671363017395 39.0 36.0 40.0 30.0 41.0 26 36.27037411058727 38.0 35.0 40.0 29.0 41.0 27 36.10303821862448 38.0 35.0 40.0 29.0 41.0 28 35.908072232448355 38.0 34.0 40.0 27.0 41.0 29 35.741995185109964 38.0 34.0 40.0 27.0 41.0 30 35.601113761075595 38.0 34.0 40.0 27.0 41.0 31 35.42174091160741 38.0 34.0 40.0 26.0 41.0 32 35.30991794029526 38.0 34.0 40.0 26.0 41.0 33 35.1803582241795 38.0 34.0 40.0 25.0 41.0 34 35.107396879499575 38.0 34.0 40.0 25.0 41.0 35 34.831016063815355 38.0 33.0 40.0 24.0 41.0 36 34.647487247659114 38.0 33.0 40.0 24.0 41.0 37 34.52191692776086 38.0 33.0 40.0 24.0 41.0 38 34.39127644356392 38.0 33.0 40.0 23.0 41.0 39 34.37250495496978 38.0 33.0 40.0 23.0 41.0 40 34.203205538327666 38.0 33.0 40.0 23.0 41.0 41 34.00778198507582 38.0 33.0 40.0 22.0 41.0 42 33.811529860800604 37.0 32.0 40.0 21.0 41.0 43 33.50792139586322 37.0 32.0 40.0 19.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 1.0 9 7.0 10 22.0 11 45.0 12 75.0 13 65.0 14 138.0 15 251.0 16 488.0 17 936.0 18 1722.0 19 3360.0 20 6596.0 21 11981.0 22 20812.0 23 33650.0 24 49293.0 25 69691.0 26 94502.0 27 124237.0 28 162162.0 29 203553.0 30 253812.0 31 313905.0 32 380929.0 33 457461.0 34 548998.0 35 654412.0 36 795160.0 37 970630.0 38 1264048.0 39 1051372.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 36.82321882650368 24.204227973296277 14.867197176891416 24.105356023308627 2 19.536575530543672 24.790970783405676 31.9627995291608 23.70965415688985 3 19.043754383345416 26.22853415042504 30.59681463743696 24.130896828792583 4 14.956088277800477 17.500495697665365 33.84433675117208 33.699079273362074 5 12.532360829368422 40.38619463940102 33.954688015515536 13.126756515715021 6 33.13847933067837 39.04017144583436 14.216595663495005 13.604753559992261 7 27.49471055136297 32.61223705613652 21.054681406213334 18.83837098628717 8 27.484930389598293 36.054251935361556 18.862774563658952 17.59804311138119 9 27.212677979544342 14.079807190332117 18.78001111540136 39.92750371472218 10 16.14097293744951 29.701508392609675 33.2075960415899 20.949922628350908 11 36.08601404757681 23.556890973539513 20.099878062388065 20.25721691649561 12 20.581835336326517 28.07560667106038 29.48138116755598 21.86117682505712 13 30.224138295501096 21.193383098435522 24.611529566459208 23.970949039604168 14 21.94605417968793 22.16180642129833 25.40746883259119 30.48467056642255 15 24.607783403266172 29.800835233842193 21.933852391002038 23.657528971889594 16 23.517087989613493 27.705512505896863 24.67260540565997 24.10479409882967 17 23.092821628847812 28.338734497908437 25.58028736817854 22.988156505065213 18 23.216538668297854 26.601598487834472 26.84623632349404 23.335626520373644 19 23.579715810708514 27.40539131751757 26.841473344577178 22.173419527196746 20 23.635373092433635 26.68070942697885 26.698343152294647 22.98557432829287 21 23.825544391097296 27.203874496040708 26.34743469434118 22.623146418520818 22 23.90627420790724 27.014077813696346 25.878829816355054 23.200818162041358 23 23.12791515047401 26.829244797582763 26.141235168873024 23.901604883070206 24 23.197071998848322 27.740204652895233 26.02074250559985 23.0419808426566 25 23.51980395792845 26.875550050479546 25.802448224679885 23.80219776691212 26 23.622408691954874 27.170640676856767 26.18589478579573 23.021055845392635 27 23.681624828713378 27.10975214581566 25.760705263386047 23.44791776208492 28 23.195693945959455 27.294946399094282 26.551613967515948 22.95774568743031 29 23.383309826159294 27.186454837193086 26.395760199531352 23.03447513711626 30 23.099872443143276 27.743255100066712 26.294078627148927 22.862793829641088 31 23.544916630476052 27.073307329609115 26.030054396965397 23.351721642949443 32 22.53145907437124 27.571413242740405 26.19528695208684 23.701840730801514 33 22.664113388867527 27.303843536677746 26.460662476850715 23.57138059760401 34 23.007649932823266 27.11506367005721 26.64752912441195 23.22975727270757 35 23.12300500086028 27.306144751210613 26.60086263435012 22.969987613578986 36 22.885645425118614 27.012137836328527 26.54323861694866 23.558978121604206 37 22.752014432361285 26.73728987034797 26.914603801766958 23.59609189552379 38 22.478477623498293 26.441356357252317 27.448244748615057 23.631921270634333 39 22.751118029025807 26.02681664163427 27.376278277845966 23.845787051493954 40 22.525866587890206 26.43928258834189 27.810164250525197 23.22468657324271 41 22.050465099539572 26.20775632385795 28.10481336481181 23.636965211790674 42 22.27841912983586 26.50405107411864 27.87280545077448 23.34472434527102 43 21.90865944352886 25.935691221963648 28.120694420919435 24.034954913588056 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 3201.0 1 2783.5 2 2366.0 3 2451.5 4 2537.0 5 2537.0 6 3520.0 7 4503.0 8 6145.0 9 7787.0 10 11530.5 11 15274.0 12 15274.0 13 33148.5 14 51023.0 15 77657.5 16 104292.0 17 84674.0 18 65056.0 19 65056.0 20 75906.5 21 86757.0 22 82236.0 23 77715.0 24 93426.5 25 109138.0 26 109138.0 27 127422.5 28 145707.0 29 161034.5 30 176362.0 31 195921.0 32 215480.0 33 215480.0 34 242413.0 35 269346.0 36 303472.0 37 337598.0 38 371124.0 39 404650.0 40 404650.0 41 429131.5 42 453613.0 43 476180.5 44 498748.0 45 532537.0 46 566326.0 47 566326.0 48 607531.0 49 648736.0 50 644025.5 51 639315.0 52 592732.5 53 546150.0 54 546150.0 55 521269.5 56 496389.0 57 467652.5 58 438916.0 59 401321.0 60 363726.0 61 363726.0 62 309960.5 63 256195.0 64 217228.0 65 178261.0 66 146838.0 67 115415.0 68 115415.0 69 93478.5 70 71542.0 71 60607.0 72 49672.0 73 39392.0 74 29112.0 75 29112.0 76 22693.0 77 16274.0 78 13689.5 79 11105.0 80 8431.0 81 5757.0 82 5757.0 83 4710.0 84 3663.0 85 3021.0 86 2379.0 87 2164.5 88 1950.0 89 1950.0 90 1398.0 91 846.0 92 715.5 93 585.0 94 565.0 95 545.0 96 545.0 97 334.5 98 124.0 99 151.0 100 178.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 7474314.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 57.175354977757564 #Duplication Level Percentage of deduplicated Percentage of total 1 83.10352501438597 47.51473542600472 2 9.192374404002143 10.511545392745504 3 2.981974612377856 5.114863709920948 4 1.4270720514283999 3.263734044770219 5 0.8041090650841574 2.2987610618509726 6 0.5227481778397312 1.793298757917754 7 0.34580408579561084 1.3840029950686088 8 0.26479156103371915 1.211164119777396 9 0.18621355211633084 0.9582143349528336 >10 1.0333176665999555 10.740491827763293 >50 0.08129843385794018 3.2107336981696695 >100 0.0488079376014237 5.289379697130974 >500 0.004929880028043478 1.9869062251297773 >1k 0.0027965611442337707 2.828910912374156 >5k 1.4219802277908286E-4 0.5017566772384019 >10k+ 9.47986818527219E-5 1.3915011191846587 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 47866 0.6404065978496488 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 21785 0.2914648755725275 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 18964 0.25372228140268127 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 14076 0.1883249753756666 No Hit CCCATGTACTCTGCGTTGATACCACTGCTTCCCATGTACTCTG 8269 0.11063222658293456 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 4.013746278253763E-5 2 0.0 0.0 0.0 0.0 4.013746278253763E-5 3 0.0 0.0 0.0 0.0 4.013746278253763E-5 4 0.0 4.013746278253763E-5 0.0 0.0 4.013746278253763E-5 5 1.3379154260845878E-5 4.013746278253763E-5 0.0 0.0 4.013746278253763E-5 6 1.3379154260845878E-5 4.013746278253763E-5 0.0 0.0 6.689577130422939E-5 7 1.3379154260845878E-5 4.013746278253763E-5 0.0 0.0 6.689577130422939E-5 8 1.3379154260845878E-5 4.013746278253763E-5 0.0 0.0 8.027492556507526E-5 9 1.3379154260845878E-5 8.027492556507526E-5 0.0 1.3379154260845878E-5 9.365407982592115E-5 10 1.3379154260845878E-5 8.027492556507526E-5 0.0 6.689577130422939E-5 9.365407982592115E-5 11 1.3379154260845878E-5 8.027492556507526E-5 0.0 1.4717069686930465E-4 9.365407982592115E-5 12 1.3379154260845878E-5 8.027492556507526E-5 0.0 1.7392900539099643E-4 1.0703323408676702E-4 13 1.3379154260845878E-5 8.027492556507526E-5 0.0 2.0068731391268817E-4 1.0703323408676702E-4 14 1.3379154260845878E-5 1.0703323408676702E-4 0.0 2.6758308521691756E-4 1.0703323408676702E-4 15 1.3379154260845878E-5 1.2041238834761291E-4 0.0 6.288202502597563E-4 1.2041238834761291E-4 16 5.351661704338351E-5 1.2041238834761291E-4 0.0 0.0012710196547803584 1.2041238834761291E-4 17 5.351661704338351E-5 1.2041238834761291E-4 0.0 0.0020202522933877275 1.2041238834761291E-4 18 5.351661704338351E-5 1.2041238834761291E-4 0.0 0.002381489458430566 1.2041238834761291E-4 19 5.351661704338351E-5 1.6054985113015053E-4 0.0 0.0032109970226030108 1.2041238834761291E-4 20 6.689577130422939E-5 1.6054985113015053E-4 0.0 0.004241191900688143 1.3379154260845878E-4 21 6.689577130422939E-5 1.6054985113015053E-4 0.0 0.0063417191196409465 1.3379154260845878E-4 22 6.689577130422939E-5 1.7392900539099643E-4 0.0 0.011118077190762925 1.3379154260845878E-4 23 6.689577130422939E-5 1.7392900539099643E-4 0.0 0.016964767602752572 1.7392900539099643E-4 24 6.689577130422939E-5 1.7392900539099643E-4 0.0 0.02710616653247375 1.873081596518423E-4 25 6.689577130422939E-5 1.7392900539099643E-4 0.0 0.03093260465107567 1.873081596518423E-4 26 6.689577130422939E-5 1.7392900539099643E-4 0.0 0.039134026212974196 1.873081596518423E-4 27 6.689577130422939E-5 1.7392900539099643E-4 0.0 0.08058264611307472 1.873081596518423E-4 28 8.027492556507526E-5 1.7392900539099643E-4 0.0 0.1337647842999371 1.873081596518423E-4 29 8.027492556507526E-5 1.7392900539099643E-4 0.0 0.1984797534596486 1.873081596518423E-4 30 8.027492556507526E-5 1.7392900539099643E-4 0.0 0.29355202363721944 1.873081596518423E-4 31 8.027492556507526E-5 1.7392900539099643E-4 0.0 0.49407878769877744 1.873081596518423E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGAACGT 410 0.0 15.792684 4 GTATTAG 1535 0.0 14.583061 1 AAGACGG 1605 0.0 14.523365 5 AGGTTAT 1275 0.0 14.219608 1 CAAGACG 1760 0.0 13.769886 4 TCGAACG 460 0.0 13.673913 3 ATCGCTC 1005 0.0 13.43781 16 CCGTCGT 1165 0.0 13.180257 9 CAAATCG 945 0.0 13.116403 13 TATCTAG 1620 0.0 13.018518 1 CGAACGA 555 0.0 13.0 16 CGTCGTA 1180 0.0 12.855932 10 GGTTATC 1255 0.0 12.824701 2 TTACACT 1385 0.0 12.823105 4 ACCGTCG 1270 0.0 12.818897 8 AATCGCT 1055 0.0 12.800948 15 TATACCG 335 0.0 12.701492 5 ATACCGT 1550 0.0 12.651613 6 ACGGACC 1730 0.0 12.51156 8 TATACTG 1330 0.0 12.240602 5 >>END_MODULE