##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2727443.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 7733226 Sequences flagged as poor quality 0 Sequence length 43 %GC 50 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.779844142664395 31.0 31.0 31.0 30.0 34.0 2 31.127175644420582 31.0 31.0 34.0 28.0 34.0 3 31.30966559104829 31.0 31.0 34.0 30.0 34.0 4 35.122097427386706 35.0 35.0 37.0 33.0 37.0 5 34.792775227311346 35.0 35.0 37.0 32.0 37.0 6 34.797392187943295 35.0 35.0 37.0 32.0 37.0 7 34.705269314513764 35.0 35.0 37.0 32.0 37.0 8 34.587277288934786 35.0 35.0 37.0 30.0 37.0 9 36.02898867820493 37.0 35.0 39.0 30.0 39.0 10 35.746113588300666 37.0 35.0 39.0 30.0 39.0 11 35.79881384560596 37.0 35.0 39.0 30.0 39.0 12 35.64386311741051 37.0 35.0 39.0 30.0 39.0 13 35.64744183087369 37.0 35.0 39.0 30.0 39.0 14 36.462785259347136 38.0 35.0 40.0 30.0 41.0 15 36.41454213286926 38.0 35.0 40.0 30.0 41.0 16 36.31647503900701 38.0 35.0 40.0 30.0 41.0 17 36.69760149257244 38.0 36.0 40.0 31.0 41.0 18 36.7038581311344 38.0 36.0 40.0 31.0 41.0 19 36.69664820347938 39.0 36.0 40.0 30.0 41.0 20 36.73074600431954 39.0 36.0 40.0 30.0 41.0 21 36.69445584546475 39.0 35.0 40.0 30.0 41.0 22 36.562169655975396 38.0 35.0 40.0 30.0 41.0 23 36.364834675722655 38.0 35.0 40.0 30.0 41.0 24 36.17586890645637 38.0 34.0 40.0 29.0 41.0 25 36.18720880522566 38.0 35.0 40.0 29.0 41.0 26 35.7096814447166 38.0 34.0 40.0 27.0 41.0 27 35.53886502217833 38.0 34.0 40.0 27.0 41.0 28 35.3223623620983 38.0 34.0 40.0 26.0 41.0 29 35.14166028511258 38.0 34.0 40.0 25.0 41.0 30 34.9978805740321 38.0 33.0 40.0 25.0 41.0 31 34.82013521911813 38.0 33.0 40.0 25.0 41.0 32 34.73443566759849 38.0 33.0 40.0 24.0 41.0 33 34.59454139837631 38.0 33.0 40.0 24.0 41.0 34 34.547822344775646 38.0 33.0 40.0 24.0 41.0 35 34.269276883929166 38.0 33.0 40.0 23.0 41.0 36 34.07198742154956 38.0 32.0 40.0 23.0 41.0 37 33.957569971445295 37.0 32.0 40.0 22.0 41.0 38 33.81538273936388 37.0 32.0 40.0 21.0 41.0 39 33.80864286133627 37.0 32.0 40.0 21.0 41.0 40 33.64341750777748 37.0 31.0 40.0 20.0 41.0 41 33.457847863233276 37.0 31.0 40.0 19.0 41.0 42 33.270350950560605 37.0 31.0 40.0 18.0 41.0 43 32.9996459433618 37.0 31.0 40.0 18.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 5.0 10 26.0 11 43.0 12 44.0 13 56.0 14 142.0 15 318.0 16 579.0 17 1271.0 18 2436.0 19 5103.0 20 9631.0 21 17762.0 22 29600.0 23 45892.0 24 65691.0 25 90052.0 26 119629.0 27 154301.0 28 195952.0 29 241491.0 30 296827.0 31 357437.0 32 422055.0 33 497566.0 34 585100.0 35 690022.0 36 821520.0 37 986747.0 38 1290575.0 39 805353.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 36.11585902183642 24.14824033333566 14.496692583405684 25.23920806142223 2 21.749564799994207 23.51488240483338 30.17216876889412 24.563384026278296 3 19.861607561967023 25.042498434676553 29.5844968193093 25.511397184047123 4 16.34434322752238 16.974041622474243 32.81370543160125 33.86790971840213 5 13.512847031756218 39.08384418094079 33.587729105550515 13.81557968175248 6 35.093879320221596 38.22036236882253 13.130509828627792 13.555248482328075 7 29.306721412254085 31.42736291426114 20.020907186729055 19.245008486755722 8 28.178072126690722 35.06779706166612 18.045405630198832 18.70872518144433 9 27.432949715940026 13.482419885310476 17.323443023648863 41.76118737510064 10 16.185948787737487 28.41698923579888 33.16874484206203 22.228317134401607 11 38.28479860798068 21.797242185861375 19.568482803942366 20.349476402215583 12 21.614731032042773 25.92184684632261 28.635410370781873 23.82801175085275 13 31.119341397755605 20.0788648876937 23.586560123808614 25.21523359074208 14 22.956512586079857 20.49053008408134 23.63449613395496 32.91846119588384 15 25.642933492438992 28.550659194493992 20.4674995920202 25.338907721046816 16 25.555272793010314 26.358171867730235 22.72037568797291 25.36617965128654 17 24.672639853018648 26.54311408977314 23.77200666319593 25.01223939401228 18 24.977700121527548 25.515638622225705 24.611320036424644 24.895341219822104 19 25.333411955114205 25.458198169819426 24.849810415472145 24.358579459594225 20 25.354153622304587 25.068878111153094 24.45372733190521 25.12324093463711 21 25.509573882878893 25.512392887521973 24.29079403602067 24.68723919357846 22 25.729055377406528 25.152788758533635 24.243595105069993 24.874560758989844 23 25.248815953393837 24.931328788270253 24.191973698945304 25.62788155939061 24 25.32031263537365 25.34740352861794 24.12479604242783 25.207487793580587 25 25.446650595753955 24.861021777974678 24.24931070163991 25.443016924631458 26 25.607217479483985 25.176026150018117 24.167430254850952 25.049326115646952 27 25.63869205426041 25.197375584264574 23.91558193178371 25.248350429691307 28 25.33704562623671 25.124663368172612 24.44445565149654 25.09383535409414 29 25.315217737073763 25.17637529279501 24.281470630756168 25.226936339375055 30 25.210358523079503 25.369619354199656 24.196512555044944 25.223509567675894 31 25.537531167458443 24.877987530689 24.342932690703726 25.24154861114883 32 25.016390313693147 25.147719722661666 24.177503670525084 25.6583862931201 33 24.987411463210826 24.983480374167264 24.372971900730693 25.65613626189122 34 25.31751949315848 24.87904789023365 24.776787850245164 25.026644766362704 35 25.560936664724398 24.81165040307887 24.527810256676837 25.099602675519893 36 25.247406451072298 24.957061904048842 24.57111689222583 25.224414752653036 37 25.26422996043307 24.619233939367607 24.834603307856256 25.281932792343063 38 24.932350354173018 24.540469915142786 25.05505464343083 25.472125087253367 39 25.17075021472281 24.44154612835575 24.977131148113347 25.410572508808098 40 24.97126037697592 24.397657588178596 25.4691121144009 25.161969920444587 41 24.704010978083403 24.320328928703237 25.641873132894343 25.333786960319017 42 24.89351791865387 24.36130794573959 25.53278541193546 25.21238872367108 43 24.592427532830413 23.941961608260254 25.79046571249825 25.675145146411083 >>END_MODULE >>Per sequence GC content pass #GC Content Count 0 386.0 1 352.5 2 319.0 3 342.0 4 365.0 5 365.0 6 488.0 7 611.0 8 887.5 9 1164.0 10 1925.5 11 2687.0 12 2687.0 13 6965.5 14 11244.0 15 20086.5 16 28929.0 17 24702.5 18 20476.0 19 20476.0 20 25773.5 21 31071.0 22 32199.0 23 33327.0 24 42421.5 25 51516.0 26 51516.0 27 65897.5 28 80279.0 29 94650.0 30 109021.0 31 131189.0 32 153357.0 33 153357.0 34 182913.0 35 212469.0 36 251472.5 37 290476.0 38 331947.5 39 373419.0 40 373419.0 41 408652.0 42 443885.0 43 479363.5 44 514842.0 45 555891.5 46 596941.0 47 596941.0 48 634283.0 49 671625.0 50 688654.5 51 705684.0 52 692947.5 53 680211.0 54 680211.0 55 657080.5 56 633950.0 57 597569.5 58 561189.0 59 515235.0 60 469281.0 61 469281.0 62 407436.0 63 345591.0 64 297361.5 65 249132.0 66 207987.5 67 166843.0 68 166843.0 69 136599.5 70 106356.0 71 89249.0 72 72142.0 73 58349.0 74 44556.0 75 44556.0 76 35471.5 77 26387.0 78 22115.0 79 17843.0 80 14005.0 81 10167.0 82 10167.0 83 8236.5 84 6306.0 85 5032.0 86 3758.0 87 3246.0 88 2734.0 89 2734.0 90 1981.0 91 1228.0 92 978.5 93 729.0 94 606.0 95 483.0 96 483.0 97 312.5 98 142.0 99 123.5 100 105.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 7733226.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 55.466134449475504 #Duplication Level Percentage of deduplicated Percentage of total 1 80.92982608378126 44.88864614535681 2 9.487251932990027 10.524423825425423 3 3.538230131943908 5.887558446347587 4 1.740702178515006 3.8620008428003296 5 1.0498154025366213 2.9114601132113243 6 0.6566638155640947 2.1853562089310197 7 0.46357423332244696 1.7998869526942758 8 0.3311550452721661 1.4694312211750489 9 0.2522600263249929 1.2592699682733255 >10 1.409549262999942 14.058776428915298 >50 0.09074447957305014 3.4456091530547446 >100 0.045205889234813126 4.534714859359145 >500 0.003277103979295962 1.2648787779055481 >1k 0.001650121321280317 1.4407606920596627 >5k 7.071948064630792E-5 0.2616854664720269 >10k+ 2.3573160215435976E-5 0.20554089801840028 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 15720 0.20327868343689945 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 9128 0.1180361210185762 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 1.2931213959090295E-5 0.0 0.0 0.0 3.8793641877270885E-5 2 1.2931213959090295E-5 0.0 0.0 0.0 3.8793641877270885E-5 3 1.2931213959090295E-5 0.0 0.0 0.0 3.8793641877270885E-5 4 1.2931213959090295E-5 1.2931213959090295E-5 0.0 0.0 3.8793641877270885E-5 5 1.2931213959090295E-5 1.2931213959090295E-5 0.0 0.0 3.8793641877270885E-5 6 1.2931213959090295E-5 1.2931213959090295E-5 0.0 0.0 7.758728375454177E-5 7 1.2931213959090295E-5 1.2931213959090295E-5 0.0 1.2931213959090295E-5 9.051849771363206E-5 8 1.2931213959090295E-5 1.2931213959090295E-5 0.0 1.2931213959090295E-5 1.0344971167272236E-4 9 1.2931213959090295E-5 1.2931213959090295E-5 0.0 2.586242791818059E-5 1.2931213959090294E-4 10 1.2931213959090295E-5 1.2931213959090295E-5 0.0 2.586242791818059E-5 1.2931213959090294E-4 11 1.2931213959090295E-5 1.2931213959090295E-5 0.0 2.586242791818059E-5 1.2931213959090294E-4 12 1.2931213959090295E-5 1.2931213959090295E-5 0.0 3.8793641877270885E-5 1.6810578146817383E-4 13 1.2931213959090295E-5 1.2931213959090295E-5 0.0 3.8793641877270885E-5 1.939682093863544E-4 14 1.2931213959090295E-5 1.2931213959090295E-5 0.0 3.8793641877270885E-5 2.7155549314089616E-4 15 1.2931213959090295E-5 1.2931213959090295E-5 0.0 7.758728375454177E-5 3.4914277689543794E-4 16 1.2931213959090295E-5 1.2931213959090295E-5 0.0 1.1638092563181265E-4 4.784549164863409E-4 17 1.2931213959090295E-5 1.2931213959090295E-5 0.0 1.5517456750908354E-4 4.913861304454312E-4 18 1.2931213959090295E-5 1.2931213959090295E-5 0.0 1.5517456750908354E-4 5.560422002408827E-4 19 1.2931213959090295E-5 1.2931213959090295E-5 0.0 1.6810578146817383E-4 5.560422002408827E-4 20 1.2931213959090295E-5 1.2931213959090295E-5 0.0 1.939682093863544E-4 5.948358421181536E-4 21 1.2931213959090295E-5 2.586242791818059E-5 0.0 4.0086763273179915E-4 6.077670560772438E-4 22 1.2931213959090295E-5 2.586242791818059E-5 0.0 6.59491911913605E-4 6.465606979545147E-4 23 1.2931213959090295E-5 2.586242791818059E-5 0.0 9.439786190135915E-4 7.50010409627237E-4 24 1.2931213959090295E-5 2.586242791818059E-5 0.0 0.001487089605295384 7.50010409627237E-4 25 1.2931213959090295E-5 2.586242791818059E-5 0.0 0.0018103699542726412 7.629416235863274E-4 26 1.2931213959090295E-5 2.586242791818059E-5 0.0 0.0025733115778589686 7.629416235863274E-4 27 1.2931213959090295E-5 2.586242791818059E-5 0.0 0.007707003519617815 7.629416235863274E-4 28 1.2931213959090295E-5 2.586242791818059E-5 0.0 0.015039001834422012 7.629416235863274E-4 29 1.2931213959090295E-5 2.586242791818059E-5 0.0 0.02458223773623065 7.629416235863274E-4 30 1.2931213959090295E-5 3.8793641877270885E-5 0.0 0.040668667901338974 7.629416235863274E-4 31 2.586242791818059E-5 3.8793641877270885E-5 0.0 0.09438493068740006 7.629416235863274E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGCGCTA 865 0.0 14.757225 24 TAGAGTG 1055 0.0 14.379147 5 GGTATCA 6680 0.0 14.096557 1 ATACCGT 1590 0.0 13.962263 6 TAGTACT 545 0.0 13.917431 4 CGCTATA 120 3.3051692E-5 13.874999 1 CAAGACG 1995 0.0 13.817042 4 CGAACGT 410 0.0 13.536586 4 CCGATAA 605 0.0 13.454546 9 TATACTG 1170 0.0 13.440171 5 AAGACGG 1915 0.0 13.428198 5 ACGCGCG 935 0.0 13.256685 21 CGCGATA 170 3.739533E-7 13.058823 14 ACGGACC 1785 0.0 12.955183 8 CCGTCGT 1215 0.0 12.942388 9 ACCGTCG 1245 0.0 12.927711 8 TATACCG 545 0.0 12.899082 5 TATCTAG 1215 0.0 12.790124 1 TACCGTC 1400 0.0 12.553571 7 CGTCGTA 1225 0.0 12.534694 10 >>END_MODULE